RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 PRG4Q92954 1404 aaPredicted RBP12.4□□□□□ -0.42
RPSA-209ENST00000495394 ERCC6L2Q5T890 1561 aa12.39□□□□□ -0.43
RPSA-209ENST00000495394 C11orf95C9JLR9 678 aaPredicted RBP12.39□□□□□ -0.43
RPSA-209ENST00000495394 HSP90AA2PQ14568 343 aaPredicted RBP12.38□□□□□ -0.43
RPSA-209ENST00000495394 CEP162Q5TB80 1403 aa12.38□□□□□ -0.43
RPSA-209ENST00000495394 LAS1LQ9Y4W2 734 aaKnown RBP12.38□□□□□ -0.43
RPSA-209ENST00000495394 KIAA0556O60303 1618 aa12.37□□□□□ -0.43
RPSA-209ENST00000495394 CARMIL2Q6F5E8 1435 aa12.37□□□□□ -0.43
RPSA-209ENST00000495394 MSH5O43196 834 aa12.36□□□□□ -0.43
RPSA-209ENST00000495394 NPM3O75607 178 aaKnown RBP12.36□□□□□ -0.43
RPSA-209ENST00000495394 DISP1Q96F81 1524 aa12.36□□□□□ -0.43
RPSA-209ENST00000495394 HDAC5Q9UQL6 1122 aa12.36□□□□□ -0.43
RPSA-209ENST00000495394 SAMD9Q5K651 1589 aa12.36□□□□□ -0.43
RPSA-209ENST00000495394 ZNF830Q96NB3 372 aaPredicted RBP12.35□□□□□ -0.43
RPSA-209ENST00000495394 FANCIQ9NVI1 1328 aa12.35□□□□□ -0.43
RPSA-209ENST00000495394 ARID3CA6NKF2 412 aa12.34□□□□□ -0.43
RPSA-209ENST00000495394 FAM9BQ8IZU0 186 aa12.34□□□□□ -0.43
RPSA-209ENST00000495394 EFCAB5A4FU69 1503 aa12.34□□□□□ -0.43
RPSA-209ENST00000495394 ANP32BQ92688 251 aaKnown RBP12.34□□□□□ -0.43
RPSA-209ENST00000495394 LOC102724159A0A0B4J2E5 919 aa12.33□□□□□ -0.44
RPSA-209ENST00000495394 PWP2Q15269 919 aaKnown RBP12.33□□□□□ -0.44
RPSA-209ENST00000495394 KIF13AQ9H1H9 1805 aa12.32□□□□□ -0.44
RPSA-209ENST00000495394 E9PSI1 815 aa12.32□□□□□ -0.44
RPSA-209ENST00000495394 IRX3P78415 501 aaPredicted RBP12.31□□□□□ -0.44
RPSA-209ENST00000495394 CCDC125Q86Z20 511 aa12.31□□□□□ -0.44
RPSA-209ENST00000495394 PLCD3Q8N3E9 789 aa12.31□□□□□ -0.44
RPSA-209ENST00000495394 RBM19Q9Y4C8 960 aaKnown RBP12.31□□□□□ -0.44
RPSA-209ENST00000495394 CENPJQ9HC77 1338 aaPredicted RBP12.3□□□□□ -0.44
RPSA-209ENST00000495394 SGSM3Q96HU1 749 aa12.3□□□□□ -0.44
RPSA-209ENST00000495394 SUPT16HQ9Y5B9 1047 aaKnown RBP12.29□□□□□ -0.44
RPSA-209ENST00000495394 SOX12O15370 315 aa12.28□□□□□ -0.44
RPSA-209ENST00000495394 MFAP1P55081 439 aaKnown RBP12.28□□□□□ -0.44
RPSA-209ENST00000495394 TMCO4Q5TGY1 634 aa12.27□□□□□ -0.45
RPSA-209ENST00000495394 PTPRGP23470 1445 aa12.27□□□□□ -0.45
RPSA-209ENST00000495394 SLC52A1Q9NWF4 448 aa12.26□□□□□ -0.45
RPSA-209ENST00000495394 ARHGAP35Q9NRY4 1499 aa12.26□□□□□ -0.45
RPSA-209ENST00000495394 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
RPSA-209ENST00000495394 RIPOR2Q9Y4F9 1068 aa12.26□□□□□ -0.45
RPSA-209ENST00000495394 APPP05067 770 aa12.25□□□□□ -0.45
RPSA-209ENST00000495394 TTC36A6NLP5 189 aa12.25□□□□□ -0.45
RPSA-209ENST00000495394 RGS3P49796 1198 aa12.25□□□□□ -0.45
RPSA-209ENST00000495394 NBPF20Q3BBV1 942 aa12.25□□□□□ -0.45
RPSA-209ENST00000495394 NBPF11Q86T75 865 aa12.25□□□□□ -0.45
RPSA-209ENST00000495394 CEP120Q8N960 986 aa12.25□□□□□ -0.45
RPSA-209ENST00000495394 PSEN1P49768 467 aa12.24□□□□□ -0.45
RPSA-209ENST00000495394 SPTY2D1Q68D10 685 aaPredicted RBP12.24□□□□□ -0.45
RPSA-209ENST00000495394 CLIP1P30622 1438 aa12.24□□□□□ -0.45
RPSA-209ENST00000495394 ADRA2BP18089 450 aa12.23□□□□□ -0.45
RPSA-209ENST00000495394 TMEM51Q9NW97 253 aa12.23□□□□□ -0.45
RPSA-209ENST00000495394 FHOD3Q2V2M9 1422 aa12.23□□□□□ -0.45
RPSA-209ENST00000495394 NBPF1Q3BBV0 1214 aa12.23□□□□□ -0.45
RPSA-209ENST00000495394 CCER1Q8TC90 406 aaPredicted RBP12.23□□□□□ -0.45
RPSA-209ENST00000495394 ADCY10Q96PN6 1610 aa12.23□□□□□ -0.45
RPSA-209ENST00000495394 AEBP1Q8IUX7 1158 aa12.22□□□□□ -0.45
RPSA-209ENST00000495394 P3H3Q8IVL6 736 aa12.22□□□□□ -0.45
RPSA-209ENST00000495394 TRIM44Q96DX7 344 aaPredicted RBP12.22□□□□□ -0.45
RPSA-209ENST00000495394 SH3BP1Q9Y3L3 701 aa12.22□□□□□ -0.45
RPSA-209ENST00000495394 KDM4FA0A1W2PPD8 638 aa12.22□□□□□ -0.45
RPSA-209ENST00000495394 MYCNP04198 464 aaPredicted RBP12.22□□□□□ -0.45
RPSA-209ENST00000495394 KDM6BO15054 1643 aa12.21□□□□□ -0.45
RPSA-209ENST00000495394 ABCA8O94911 1581 aa12.21□□□□□ -0.45
RPSA-209ENST00000495394 ABCC2Q92887 1545 aa12.21□□□□□ -0.45
RPSA-209ENST00000495394 APBB1O00213 710 aa12.21□□□□□ -0.45
RPSA-209ENST00000495394 FOXD4L6Q3SYB3 417 aaPredicted RBP12.21□□□□□ -0.45
RPSA-209ENST00000495394 FOXD4L3Q6VB84 417 aaPredicted RBP12.21□□□□□ -0.45
RPSA-209ENST00000495394 UHRF1BP1LA0JNW5 1464 aa12.21□□□□□ -0.46
RPSA-209ENST00000495394 UACAQ9BZF9 1416 aa12.21□□□□□ -0.46
RPSA-209ENST00000495394 RAPGEF6Q8TEU7 1601 aa12.2□□□□□ -0.46
RPSA-209ENST00000495394 CDCA8Q53HL2 280 aa12.2□□□□□ -0.46
RPSA-209ENST00000495394 FMN1Q68DA7 1419 aa12.19□□□□□ -0.46
RPSA-209ENST00000495394 ZNF316A6NFI3 1004 aaPredicted RBP12.19□□□□□ -0.46
RPSA-209ENST00000495394 PLB1Q6P1J6 1458 aa12.19□□□□□ -0.46
RPSA-209ENST00000495394 ABCC10Q5T3U5 1492 aa12.18□□□□□ -0.46
RPSA-209ENST00000495394 BRD1O95696 1058 aa12.18□□□□□ -0.46
RPSA-209ENST00000495394 TSHZ1Q6ZSZ6 1077 aa12.18□□□□□ -0.46
RPSA-209ENST00000495394 RINLQ6ZS11 566 aa12.17□□□□□ -0.46
RPSA-209ENST00000495394 EGFL6Q8IUX8 553 aa12.16□□□□□ -0.46
RPSA-209ENST00000495394 MAPKBP1O60336 1514 aa12.16□□□□□ -0.46
RPSA-209ENST00000495394 FAM69CQ0P6D2 419 aa12.15□□□□□ -0.46
RPSA-209ENST00000495394 CARD10Q9BWT7 1032 aa12.15□□□□□ -0.46
RPSA-209ENST00000495394 VPS8Q8N3P4 1428 aa12.15□□□□□ -0.46
RPSA-209ENST00000495394 ZCCHC11Q5TAX3 1644 aaKnown RBP12.15□□□□□ -0.46
RPSA-209ENST00000495394 HECW1Q76N89 1606 aa12.15□□□□□ -0.46
RPSA-209ENST00000495394 CASC1Q6TDU7 716 aa12.15□□□□□ -0.46
RPSA-209ENST00000495394 NOL8Q76FK4 1167 aaKnown RBP12.15□□□□□ -0.46
RPSA-209ENST00000495394 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.15□□□□□ -0.46
RPSA-209ENST00000495394 DIP2BQ9P265 1576 aa12.15□□□□□ -0.46
RPSA-209ENST00000495394 KDM5BQ9UGL1 1544 aa12.14□□□□□ -0.47
RPSA-209ENST00000495394 HSP90AA1P07900 732 aaKnown RBP12.14□□□□□ -0.47
RPSA-209ENST00000495394 NEUROD2Q15784 382 aa12.14□□□□□ -0.47
RPSA-209ENST00000495394 PCF11O94913 1555 aaKnown RBP12.13□□□□□ -0.47
RPSA-209ENST00000495394 CC2D1BQ5T0F9 858 aaKnown RBP12.13□□□□□ -0.47
RPSA-209ENST00000495394 FAM43AQ8N2R8 423 aa12.13□□□□□ -0.47
RPSA-209ENST00000495394 NUP153P49790 1475 aaKnown RBP12.12□□□□□ -0.47
RPSA-209ENST00000495394 PKD2Q13563 968 aa12.12□□□□□ -0.47
RPSA-209ENST00000495394 GZF1Q9H116 711 aaPredicted RBP12.12□□□□□ -0.47
RPSA-209ENST00000495394 SPRYD3Q8NCJ5 442 aa12.11□□□□□ -0.47
RPSA-209ENST00000495394 FYCO1Q9BQS8 1478 aa12.11□□□□□ -0.47
RPSA-209ENST00000495394 LRRIQ1Q96JM4 1722 aa12.11□□□□□ -0.47
RPSA-209ENST00000495394 CASKIN1Q8WXD9 1431 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms