RNA–Protein interactions for RNA: ENST00000495341.5

LMNA-215, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-215ENST00000495341 MAST1Q9Y2H9 1570 aa25.94■■□□□ 1.74
LMNA-215ENST00000495341 WASHC2CQ9Y4E1 1318 aa25.92■■□□□ 1.74
LMNA-215ENST00000495341 CEP170BQ9Y4F5 1589 aaPredicted RBP25.92■■□□□ 1.74
LMNA-215ENST00000495341 ZNF142P52746 1687 aaPredicted RBP25.92■■□□□ 1.74
LMNA-215ENST00000495341 FAM135AQ9P2D6 1515 aa25.92■■□□□ 1.74
LMNA-215ENST00000495341 NCKAP5LQ9HCH0 1330 aa25.87■■□□□ 1.73
LMNA-215ENST00000495341 PZPP20742 1482 aa25.86■■□□□ 1.73
LMNA-215ENST00000495341 FBXO31Q5XUX0 539 aaPredicted RBP25.86■■□□□ 1.73
LMNA-215ENST00000495341 TNRQ92752 1358 aa25.85■■□□□ 1.73
LMNA-215ENST00000495341 A2ML1A8K2U0 1454 aa25.85■■□□□ 1.73
LMNA-215ENST00000495341 PLA2R1Q13018 1463 aa25.85■■□□□ 1.73
LMNA-215ENST00000495341 PTPN23Q9H3S7 1636 aa25.85■■□□□ 1.73
LMNA-215ENST00000495341 RNF17Q9BXT8 1623 aaKnown RBP25.83■■□□□ 1.73
LMNA-215ENST00000495341 EIF2AK4Q9P2K8 1649 aaKnown RBP25.81■■□□□ 1.72
LMNA-215ENST00000495341 FGD6Q6ZV73 1430 aa25.81■■□□□ 1.72
LMNA-215ENST00000495341 PKD2Q13563 968 aa25.81■■□□□ 1.72
LMNA-215ENST00000495341 SHANK2Q9UPX8 1470 aa25.8■■□□□ 1.72
LMNA-215ENST00000495341 DUOX2Q9NRD8 1548 aa25.8■■□□□ 1.72
LMNA-215ENST00000495341 ABCC5O15440 1437 aa25.8■■□□□ 1.72
LMNA-215ENST00000495341 KIF15Q9NS87 1388 aa25.79■■□□□ 1.72
LMNA-215ENST00000495341 TCOF1Q13428 1488 aaKnown RBP25.79■■□□□ 1.72
LMNA-215ENST00000495341 DNMT1P26358 1616 aaKnown RBP25.78■■□□□ 1.72
LMNA-215ENST00000495341 CROCC2H7BZ55 1655 aa25.78■■□□□ 1.72
LMNA-215ENST00000495341 ABCC3O15438 1527 aa25.78■■□□□ 1.72
LMNA-215ENST00000495341 DAPK1P53355 1430 aa25.77■■□□□ 1.72
LMNA-215ENST00000495341 RRP7BPQ9NSQ0 103 aa25.76■■□□□ 1.71
LMNA-215ENST00000495341 LTBP4Q8N2S1 1624 aa25.76■■□□□ 1.71
LMNA-215ENST00000495341 ZC3H13Q5T200 1668 aaKnown RBP25.76■■□□□ 1.71
LMNA-215ENST00000495341 MROH1Q8NDA8 1641 aa25.74■■□□□ 1.71
LMNA-215ENST00000495341 NLRP1Q9C000 1473 aa25.73■■□□□ 1.71
LMNA-215ENST00000495341 ERBINQ96RT1 1412 aa25.72■■□□□ 1.71
LMNA-215ENST00000495341 ZNF335Q9H4Z2 1342 aaPredicted RBP25.72■■□□□ 1.71
LMNA-215ENST00000495341 CHIC2Q9UKJ5 165 aa25.7■■□□□ 1.7
LMNA-215ENST00000495341 UGGT1Q9NYU2 1555 aa25.69■■□□□ 1.7
LMNA-215ENST00000495341 CEP152O94986 1710 aa25.68■■□□□ 1.7
LMNA-215ENST00000495341 ANKRD30AQ9BXX3 1397 aa25.68■■□□□ 1.7
LMNA-215ENST00000495341 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.68■■□□□ 1.7
LMNA-215ENST00000495341 ERVK-7P63135 1459 aa25.67■■□□□ 1.7
LMNA-215ENST00000495341 SPATA31D1Q6ZQQ2 1576 aa25.67■■□□□ 1.7
LMNA-215ENST00000495341 THEMISQ8N1K5 641 aaPredicted RBP25.67■■□□□ 1.7
LMNA-215ENST00000495341 PRDM15P57071 1507 aaPredicted RBP25.67■■□□□ 1.7
LMNA-215ENST00000495341 FAM50AQ14320 339 aaKnown RBP25.66■■□□□ 1.7
LMNA-215ENST00000495341 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.66■■□□□ 1.7
LMNA-215ENST00000495341 IQSEC2Q5JU85 1478 aa25.66■■□□□ 1.7
LMNA-215ENST00000495341 POLR1AO95602 1720 aaPredicted RBP25.64■■□□□ 1.7
LMNA-215ENST00000495341 ANKLE2Q86XL3 938 aa25.64■■□□□ 1.7
LMNA-215ENST00000495341 NEURL4Q96JN8 1562 aa25.62■■□□□ 1.69
LMNA-215ENST00000495341 KANK1Q14678 1352 aa25.62■■□□□ 1.69
LMNA-215ENST00000495341 DEPDC5O75140 1603 aa25.59■■□□□ 1.69
LMNA-215ENST00000495341 ARHGAP31Q2M1Z3 1444 aa25.57■■□□□ 1.68
LMNA-215ENST00000495341 ADGRL2O95490 1459 aa25.56■■□□□ 1.68
LMNA-215ENST00000495341 NPHP4O75161 1426 aaPredicted RBP25.55■■□□□ 1.68
LMNA-215ENST00000495341 CFAP65Q6ZU64 1925 aaKnown RBP25.52■■□□□ 1.68
LMNA-215ENST00000495341 MED14O60244 1454 aa25.52■■□□□ 1.68
LMNA-215ENST00000495341 UBAP1LF5GYI3 381 aa25.51■■□□□ 1.67
LMNA-215ENST00000495341 LMTK2Q8IWU2 1503 aa25.49■■□□□ 1.67
LMNA-215ENST00000495341 UBR1Q8IWV7 1749 aa25.49■■□□□ 1.67
LMNA-215ENST00000495341 VWDEQ8N2E2 1590 aa25.48■■□□□ 1.67
LMNA-215ENST00000495341 CPS1P31327 1500 aa25.48■■□□□ 1.67
LMNA-215ENST00000495341 IQGAP1P46940 1657 aa25.48■■□□□ 1.67
LMNA-215ENST00000495341 ANKRD50Q9ULJ7 1429 aa25.47■■□□□ 1.67
LMNA-215ENST00000495341 STAG3Q9UJ98 1225 aa25.45■■□□□ 1.66
LMNA-215ENST00000495341 PPARGC1BQ86YN6 1023 aaKnown RBP25.44■■□□□ 1.66
LMNA-215ENST00000495341 SCAF11Q99590 1463 aaKnown RBP25.44■■□□□ 1.66
LMNA-215ENST00000495341 EFCAB6Q5THR3 1501 aa25.43■■□□□ 1.66
LMNA-215ENST00000495341 PIK3C2BO00750 1634 aa25.42■■□□□ 1.66
LMNA-215ENST00000495341 SLIT1O75093 1534 aa25.41■■□□□ 1.66
LMNA-215ENST00000495341 ARHGAP23Q9P227 1491 aa25.4■■□□□ 1.66
LMNA-215ENST00000495341 TXNDC2Q86VQ3 553 aa25.4■■□□□ 1.66
LMNA-215ENST00000495341 EID1Q9Y6B2 187 aa25.4■■□□□ 1.66
LMNA-215ENST00000495341 LTKP29376 864 aa25.39■■□□□ 1.66
LMNA-215ENST00000495341 SCAF1Q9H7N4 1312 aaKnown RBP25.38■■□□□ 1.65
LMNA-215ENST00000495341 SYNMO15061 1565 aa25.38■■□□□ 1.65
LMNA-215ENST00000495341 ITGAEP38570 1179 aa25.37■■□□□ 1.65
LMNA-215ENST00000495341 IDI1Q13907 227 aa25.37■■□□□ 1.65
LMNA-215ENST00000495341 NOS1P29475 1434 aa25.37■■□□□ 1.65
LMNA-215ENST00000495341 TMEM2Q9UHN6 1383 aa25.36■■□□□ 1.65
LMNA-215ENST00000495341 ROCK1Q13464 1354 aa25.35■■□□□ 1.65
LMNA-215ENST00000495341 DISP3Q9P2K9 1392 aa25.35■■□□□ 1.65
LMNA-215ENST00000495341 TOM1O60784 492 aa25.35■■□□□ 1.65
LMNA-215ENST00000495341 PIP4K2BP78356 416 aa25.34■■□□□ 1.65
LMNA-215ENST00000495341 RPRD2Q5VT52 1461 aaKnown RBP25.33■■□□□ 1.65
LMNA-215ENST00000495341 UNC13BO14795 1591 aa25.31■■□□□ 1.64
LMNA-215ENST00000495341 TET3O43151 1660 aa25.31■■□□□ 1.64
LMNA-215ENST00000495341 KDM5AP29375 1690 aaKnown RBP25.31■■□□□ 1.64
LMNA-215ENST00000495341 ADGRB3O60242 1522 aa25.31■■□□□ 1.64
LMNA-215ENST00000495341 SLC52A1Q9NWF4 448 aa25.3■■□□□ 1.64
LMNA-215ENST00000495341 STRCP1A6NGW2 1772 aa25.28■■□□□ 1.64
LMNA-215ENST00000495341 LRRC7Q96NW7 1537 aa25.28■■□□□ 1.64
LMNA-215ENST00000495341 GCC2Q8IWJ2 1684 aa25.25■■□□□ 1.63
LMNA-215ENST00000495341 NUP155O75694 1391 aa25.21■■□□□ 1.63
LMNA-215ENST00000495341 HSPA1LP34931 641 aa25.21■■□□□ 1.63
LMNA-215ENST00000495341 BCANQ96GW7 911 aa25.21■■□□□ 1.63
LMNA-215ENST00000495341 IQGAP3Q86VI3 1631 aa25.21■■□□□ 1.63
LMNA-215ENST00000495341 SLC26A8Q96RN1 970 aa25.2■■□□□ 1.62
LMNA-215ENST00000495341 CHGAP10645 457 aaKnown RBP25.19■■□□□ 1.62
LMNA-215ENST00000495341 E9PCH4 1651 aa25.19■■□□□ 1.62
LMNA-215ENST00000495341 ALKQ9UM73 1620 aa25.19■■□□□ 1.62
LMNA-215ENST00000495341 PPP1R15AO75807 674 aaPredicted RBP25.17■■□□□ 1.62
LMNA-215ENST00000495341 SENP3Q9H4L4 574 aaPredicted RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms