RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-222ENST00000495071 NPM2Q86SE8 214 aaKnown RBP17.92■□□□□ 0.46
SUPT20H-222ENST00000495071 NLRP13Q86W25 1043 aa17.92■□□□□ 0.46
SUPT20H-222ENST00000495071 RCAN3Q9UKA8 241 aa17.92■□□□□ 0.46
SUPT20H-222ENST00000495071 KTN1Q86UP2 1357 aaKnown RBP17.92■□□□□ 0.46
SUPT20H-222ENST00000495071 ZBTB47Q9UFB7 747 aaPredicted RBP17.91■□□□□ 0.46
SUPT20H-222ENST00000495071 CC2D1BQ5T0F9 858 aaKnown RBP17.91■□□□□ 0.46
SUPT20H-222ENST00000495071 RRP1P56182 461 aaKnown RBP17.9■□□□□ 0.46
SUPT20H-222ENST00000495071 CEP170Q5SW79 1584 aa17.9■□□□□ 0.46
SUPT20H-222ENST00000495071 EXOC6Q8TAG9 804 aa17.89■□□□□ 0.45
SUPT20H-222ENST00000495071 DEKP35659 375 aaKnown RBP17.88■□□□□ 0.45
SUPT20H-222ENST00000495071 CCDC144AA2RUR9 1427 aa17.88■□□□□ 0.45
SUPT20H-222ENST00000495071 RTL5Q5HYW3 569 aaPredicted RBP17.88■□□□□ 0.45
SUPT20H-222ENST00000495071 IPO9Q96P70 1041 aaKnown RBP17.88■□□□□ 0.45
SUPT20H-222ENST00000495071 ATP10BO94823 1461 aa17.88■□□□□ 0.45
SUPT20H-222ENST00000495071 NBPF1Q3BBV0 1214 aa17.87■□□□□ 0.45
SUPT20H-222ENST00000495071 ARHGEF12Q9NZN5 1544 aa17.87■□□□□ 0.45
SUPT20H-222ENST00000495071 CROCC2H7BZ55 1655 aa17.86■□□□□ 0.45
SUPT20H-222ENST00000495071 SHANK2Q9UPX8 1470 aa17.86■□□□□ 0.45
SUPT20H-222ENST00000495071 LRPPRCP42704 1394 aaKnown RBP17.85■□□□□ 0.45
SUPT20H-222ENST00000495071 ADCY10Q96PN6 1610 aa17.85■□□□□ 0.45
SUPT20H-222ENST00000495071 ABCC10Q5T3U5 1492 aa17.83■□□□□ 0.44
SUPT20H-222ENST00000495071 PDE3BQ13370 1112 aa17.82■□□□□ 0.44
SUPT20H-222ENST00000495071 PTPRGP23470 1445 aa17.82■□□□□ 0.44
SUPT20H-222ENST00000495071 CDCA7LQ96GN5 454 aa17.82■□□□□ 0.44
SUPT20H-222ENST00000495071 RSPH4AQ5TD94 716 aa17.82■□□□□ 0.44
SUPT20H-222ENST00000495071 NUP160Q12769 1436 aa17.81■□□□□ 0.44
SUPT20H-222ENST00000495071 PANK3Q9H999 370 aa17.8■□□□□ 0.44
SUPT20H-222ENST00000495071 CDC42BPAQ5VT25 1732 aa17.8■□□□□ 0.44
SUPT20H-222ENST00000495071 CCDC141Q6ZP82 1450 aa17.79■□□□□ 0.44
SUPT20H-222ENST00000495071 TCERG1O14776 1098 aaKnown RBP17.79■□□□□ 0.44
SUPT20H-222ENST00000495071 PLIN1O60240 522 aa17.79■□□□□ 0.44
SUPT20H-222ENST00000495071 TMF1P82094 1093 aa17.79■□□□□ 0.44
SUPT20H-222ENST00000495071 FAM135AQ9P2D6 1515 aa17.78■□□□□ 0.44
SUPT20H-222ENST00000495071 PRAG1Q86YV5 1406 aa17.77■□□□□ 0.44
SUPT20H-222ENST00000495071 PARD3Q8TEW0 1356 aa17.77■□□□□ 0.44
SUPT20H-222ENST00000495071 ABCA8O94911 1581 aa17.76■□□□□ 0.43
SUPT20H-222ENST00000495071 KDM5DQ9BY66 1539 aa17.76■□□□□ 0.43
SUPT20H-222ENST00000495071 PER1O15534 1290 aaPredicted RBP17.75■□□□□ 0.43
SUPT20H-222ENST00000495071 PDE4AP27815 886 aa17.75■□□□□ 0.43
SUPT20H-222ENST00000495071 DISP3Q9P2K9 1392 aa17.73■□□□□ 0.43
SUPT20H-222ENST00000495071 WDR43Q15061 677 aaKnown RBP eCLIP17.72■□□□□ 0.43
SUPT20H-222ENST00000495071 KNSTRNQ9Y448 316 aa17.72■□□□□ 0.43
SUPT20H-222ENST00000495071 ARHGAP5Q13017 1502 aa17.71■□□□□ 0.43
SUPT20H-222ENST00000495071 TESK2Q96S53 571 aa17.71■□□□□ 0.43
SUPT20H-222ENST00000495071 WASHC2CQ9Y4E1 1318 aa17.71■□□□□ 0.43
SUPT20H-222ENST00000495071 ARHGEF5Q12774 1597 aa17.71■□□□□ 0.42
SUPT20H-222ENST00000495071 CRBNQ96SW2 442 aa17.7■□□□□ 0.42
SUPT20H-222ENST00000495071 LAS1LQ9Y4W2 734 aaKnown RBP17.7■□□□□ 0.42
SUPT20H-222ENST00000495071 ERBINQ96RT1 1412 aa17.7■□□□□ 0.42
SUPT20H-222ENST00000495071 A2MP01023 1474 aa17.68■□□□□ 0.42
SUPT20H-222ENST00000495071 SYCP2Q9BX26 1530 aa17.68■□□□□ 0.42
SUPT20H-222ENST00000495071 SAMD9LQ8IVG5 1584 aa17.67■□□□□ 0.42
SUPT20H-222ENST00000495071 ADAMTS8Q9UP79 889 aa17.67■□□□□ 0.42
SUPT20H-222ENST00000495071 PLEKHH2Q8IVE3 1493 aa17.67■□□□□ 0.42
SUPT20H-222ENST00000495071 COL17A1Q9UMD9 1497 aaPredicted RBP17.66■□□□□ 0.42
SUPT20H-222ENST00000495071 MS4A1P11836 297 aa17.66■□□□□ 0.42
SUPT20H-222ENST00000495071 BACH2Q9BYV9 841 aa17.66■□□□□ 0.42
SUPT20H-222ENST00000495071 GPRASP1Q5JY77 1395 aa17.66■□□□□ 0.42
SUPT20H-222ENST00000495071 SKAP1Q86WV1 359 aa17.66■□□□□ 0.42
SUPT20H-222ENST00000495071 PLA2R1Q13018 1463 aa17.65■□□□□ 0.42
SUPT20H-222ENST00000495071 TRPM1Q7Z4N2 1603 aa17.64■□□□□ 0.41
SUPT20H-222ENST00000495071 NEFMP07197 916 aa17.63■□□□□ 0.41
SUPT20H-222ENST00000495071 DAXXQ9UER7 740 aaPredicted RBP17.63■□□□□ 0.41
SUPT20H-222ENST00000495071 E9PCH4 1651 aa17.63■□□□□ 0.41
SUPT20H-222ENST00000495071 CDCA8Q53HL2 280 aa17.61■□□□□ 0.41
SUPT20H-222ENST00000495071 C20orf194Q5TEA3 1177 aa17.61■□□□□ 0.41
SUPT20H-222ENST00000495071 EFCAB2Q5VUJ9 269 aa17.6■□□□□ 0.41
SUPT20H-222ENST00000495071 PPP2R1AP30153 589 aa17.6■□□□□ 0.41
SUPT20H-222ENST00000495071 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.6■□□□□ 0.41
SUPT20H-222ENST00000495071 PREX2Q70Z35 1606 aa17.6■□□□□ 0.41
SUPT20H-222ENST00000495071 CDC42BPBQ9Y5S2 1711 aa17.59■□□□□ 0.41
SUPT20H-222ENST00000495071 BLMP54132 1417 aaPredicted RBP17.59■□□□□ 0.41
SUPT20H-222ENST00000495071 GOLGA2Q08379 1002 aa17.58■□□□□ 0.41
SUPT20H-222ENST00000495071 DDRGK1Q96HY6 314 aa17.57■□□□□ 0.4
SUPT20H-222ENST00000495071 PRDM15P57071 1507 aaPredicted RBP17.57■□□□□ 0.4
SUPT20H-222ENST00000495071 CCDC146Q8IYE0 955 aa17.57■□□□□ 0.4
SUPT20H-222ENST00000495071 PPM1GO15355 546 aaPredicted RBP17.55■□□□□ 0.4
SUPT20H-222ENST00000495071 EIF2AK4Q9P2K8 1649 aaKnown RBP17.55■□□□□ 0.4
SUPT20H-222ENST00000495071 TTC37Q6PGP7 1564 aa17.55■□□□□ 0.4
SUPT20H-222ENST00000495071 SPAG9O60271 1321 aaKnown RBP17.54■□□□□ 0.4
SUPT20H-222ENST00000495071 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.53■□□□□ 0.4
SUPT20H-222ENST00000495071 DUOX2Q9NRD8 1548 aa17.53■□□□□ 0.4
SUPT20H-222ENST00000495071 RGS3P49796 1198 aa17.53■□□□□ 0.4
SUPT20H-222ENST00000495071 UNC13BO14795 1591 aa17.53■□□□□ 0.4
SUPT20H-222ENST00000495071 CENPQQ7L2Z9 268 aaPredicted RBP17.53■□□□□ 0.4
SUPT20H-222ENST00000495071 INSRP06213 1382 aa17.53■□□□□ 0.4
SUPT20H-222ENST00000495071 DUSP27Q5VZP5 1158 aa17.52■□□□□ 0.4
SUPT20H-222ENST00000495071 PLEKHH1Q9ULM0 1364 aa17.52■□□□□ 0.4
SUPT20H-222ENST00000495071 AMER1Q5JTC6 1135 aaPredicted RBP17.52■□□□□ 0.39
SUPT20H-222ENST00000495071 ZMYM4Q5VZL5 1548 aa17.51■□□□□ 0.39
SUPT20H-222ENST00000495071 AFAP1Q8N556 730 aa17.51■□□□□ 0.39
SUPT20H-222ENST00000495071 SLC4A3P48751 1232 aa17.5■□□□□ 0.39
SUPT20H-222ENST00000495071 APAF1O14727 1248 aa17.5■□□□□ 0.39
SUPT20H-222ENST00000495071 MAGI2Q86UL8 1455 aa17.5■□□□□ 0.39
SUPT20H-222ENST00000495071 IQGAP3Q86VI3 1631 aa17.49■□□□□ 0.39
SUPT20H-222ENST00000495071 MAST1Q9Y2H9 1570 aa17.49■□□□□ 0.39
SUPT20H-222ENST00000495071 USP35Q9P2H5 1018 aa17.49■□□□□ 0.39
SUPT20H-222ENST00000495071 CANXP27824 592 aaKnown RBP17.48■□□□□ 0.39
SUPT20H-222ENST00000495071 EIF3AQ14152 1382 aaKnown RBP17.47■□□□□ 0.39
SUPT20H-222ENST00000495071 LAMC1P11047 1609 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms