RNA–Protein interactions for RNA: ENST00000494877.5

GABBR1-220, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-220ENST00000494877 RALGAPBQ86X10 1494 aa23.94■■□□□ 1.42
GABBR1-220ENST00000494877 CCDC144AA2RUR9 1427 aa23.93■■□□□ 1.42
GABBR1-220ENST00000494877 USP47Q96K76 1375 aa23.92■■□□□ 1.42
GABBR1-220ENST00000494877 FANCAO15360 1455 aa23.92■■□□□ 1.42
GABBR1-220ENST00000494877 RIMBP3CA6NJZ7 1639 aa23.91■■□□□ 1.42
GABBR1-220ENST00000494877 RIMBP3BA6NNM3 1639 aa23.91■■□□□ 1.42
GABBR1-220ENST00000494877 RIMBP3Q9UFD9 1639 aa23.91■■□□□ 1.42
GABBR1-220ENST00000494877 KIF7Q2M1P5 1343 aa23.91■■□□□ 1.42
GABBR1-220ENST00000494877 AFAP1Q8N556 730 aa23.91■■□□□ 1.42
GABBR1-220ENST00000494877 PLA2R1Q13018 1463 aa23.9■■□□□ 1.42
GABBR1-220ENST00000494877 ZFYVE16Q7Z3T8 1539 aa23.89■■□□□ 1.42
GABBR1-220ENST00000494877 DCAF11Q8TEB1 546 aa23.89■■□□□ 1.41
GABBR1-220ENST00000494877 KDM5CP41229 1560 aa23.89■■□□□ 1.41
GABBR1-220ENST00000494877 ATP10AO60312 1499 aa23.87■■□□□ 1.41
GABBR1-220ENST00000494877 KDM2AQ9Y2K7 1162 aa23.87■■□□□ 1.41
GABBR1-220ENST00000494877 CARD11Q9BXL7 1154 aa23.84■■□□□ 1.41
GABBR1-220ENST00000494877 ARID4BQ4LE39 1312 aaPredicted RBP23.83■■□□□ 1.41
GABBR1-220ENST00000494877 ADGRL1O94910 1474 aa23.82■■□□□ 1.4
GABBR1-220ENST00000494877 BCORL1Q5H9F3 1711 aa23.82■■□□□ 1.4
GABBR1-220ENST00000494877 INO80Q9ULG1 1556 aaPredicted RBP23.82■■□□□ 1.4
GABBR1-220ENST00000494877 ATP7AQ04656 1500 aa23.81■■□□□ 1.4
GABBR1-220ENST00000494877 SCAPERQ9BY12 1400 aa23.81■■□□□ 1.4
GABBR1-220ENST00000494877 PRAG1Q86YV5 1406 aa23.79■■□□□ 1.4
GABBR1-220ENST00000494877 PRKRIP1Q9H875 184 aaPredicted RBP23.78■■□□□ 1.4
GABBR1-220ENST00000494877 DEPDC5O75140 1603 aa23.77■■□□□ 1.4
GABBR1-220ENST00000494877 RGL3Q3MIN7 710 aa23.77■■□□□ 1.4
GABBR1-220ENST00000494877 A2MP01023 1474 aa23.76■■□□□ 1.39
GABBR1-220ENST00000494877 ROCK2O75116 1388 aaKnown RBP23.76■■□□□ 1.39
GABBR1-220ENST00000494877 CD109Q6YHK3 1445 aa23.76■■□□□ 1.39
GABBR1-220ENST00000494877 TRPM1Q7Z4N2 1603 aa23.74■■□□□ 1.39
GABBR1-220ENST00000494877 E9PCH4 1651 aa23.73■■□□□ 1.39
GABBR1-220ENST00000494877 DHX29Q7Z478 1369 aaKnown RBP23.72■■□□□ 1.39
GABBR1-220ENST00000494877 ST20-MTHFSA0A0A6YYL1 179 aa23.71■■□□□ 1.39
GABBR1-220ENST00000494877 MYT1LQ9UL68 1186 aa23.71■■□□□ 1.39
GABBR1-220ENST00000494877 KANK1Q14678 1352 aa23.7■■□□□ 1.38
GABBR1-220ENST00000494877 EIF2AK4Q9P2K8 1649 aaKnown RBP23.7■■□□□ 1.38
GABBR1-220ENST00000494877 GPRASP1Q5JY77 1395 aa23.69■■□□□ 1.38
GABBR1-220ENST00000494877 ZNF518AQ6AHZ1 1483 aa23.69■■□□□ 1.38
GABBR1-220ENST00000494877 VWDEQ8N2E2 1590 aa23.69■■□□□ 1.38
GABBR1-220ENST00000494877 TET3O43151 1660 aa23.68■■□□□ 1.38
GABBR1-220ENST00000494877 PTPRTO14522 1441 aa23.68■■□□□ 1.38
GABBR1-220ENST00000494877 CFAP74Q9C0B2 1584 aa23.67■■□□□ 1.38
GABBR1-220ENST00000494877 TRPM2O94759 1503 aa23.67■■□□□ 1.38
GABBR1-220ENST00000494877 KIF3BO15066 747 aa23.67■■□□□ 1.38
GABBR1-220ENST00000494877 POLR3GLQ9BT43 218 aa23.67■■□□□ 1.38
GABBR1-220ENST00000494877 SUPT16HQ9Y5B9 1047 aaKnown RBP23.67■■□□□ 1.38
GABBR1-220ENST00000494877 LAMC1P11047 1609 aa23.66■■□□□ 1.38
GABBR1-220ENST00000494877 KIDINS220Q9ULH0 1771 aa23.65■■□□□ 1.38
GABBR1-220ENST00000494877 SPHKAPQ2M3C7 1700 aa23.65■■□□□ 1.38
GABBR1-220ENST00000494877 NBPF1Q3BBV0 1214 aa23.64■■□□□ 1.38
GABBR1-220ENST00000494877 PRDM15P57071 1507 aaPredicted RBP23.64■■□□□ 1.37
GABBR1-220ENST00000494877 CCDC184Q52MB2 194 aa23.63■■□□□ 1.37
GABBR1-220ENST00000494877 HNRNPUQ00839 825 aaKnown RBP eCLIP23.62■■□□□ 1.37
GABBR1-220ENST00000494877 FAM69CQ0P6D2 419 aa23.62■■□□□ 1.37
GABBR1-220ENST00000494877 MRS2Q9HD23 443 aa23.61■■□□□ 1.37
GABBR1-220ENST00000494877 MROH1Q8NDA8 1641 aa23.6■■□□□ 1.37
GABBR1-220ENST00000494877 CEP152O94986 1710 aa23.6■■□□□ 1.37
GABBR1-220ENST00000494877 POGZQ7Z3K3 1410 aa23.6■■□□□ 1.37
GABBR1-220ENST00000494877 STAC3Q96MF2 364 aa23.59■■□□□ 1.37
GABBR1-220ENST00000494877 CLTCL1P53675 1640 aa23.58■■□□□ 1.36
GABBR1-220ENST00000494877 MLH3Q9UHC1 1453 aa23.57■■□□□ 1.36
GABBR1-220ENST00000494877 RNF17Q9BXT8 1623 aaKnown RBP23.54■■□□□ 1.36
GABBR1-220ENST00000494877 NEO1Q92859 1461 aa23.53■■□□□ 1.36
GABBR1-220ENST00000494877 NEURL4Q96JN8 1562 aa23.53■■□□□ 1.36
GABBR1-220ENST00000494877 MADDQ8WXG6 1647 aa23.52■■□□□ 1.36
GABBR1-220ENST00000494877 FAM9BQ8IZU0 186 aa23.52■■□□□ 1.36
GABBR1-220ENST00000494877 EFCAB6Q5THR3 1501 aa23.52■■□□□ 1.36
GABBR1-220ENST00000494877 HECW2Q9P2P5 1572 aa23.52■■□□□ 1.35
GABBR1-220ENST00000494877 LMTK2Q8IWU2 1503 aa23.51■■□□□ 1.35
GABBR1-220ENST00000494877 RAPGEF3O95398 923 aa23.51■■□□□ 1.35
GABBR1-220ENST00000494877 GLI2P10070 1586 aa23.51■■□□□ 1.35
GABBR1-220ENST00000494877 TESK2Q96S53 571 aa23.5■■□□□ 1.35
GABBR1-220ENST00000494877 MAP3K4Q9Y6R4 1608 aa23.5■■□□□ 1.35
GABBR1-220ENST00000494877 COL17A1Q9UMD9 1497 aaPredicted RBP23.49■■□□□ 1.35
GABBR1-220ENST00000494877 DIP2BQ9P265 1576 aa23.49■■□□□ 1.35
GABBR1-220ENST00000494877 KTN1Q86UP2 1357 aaKnown RBP23.48■■□□□ 1.35
GABBR1-220ENST00000494877 PPRC1Q5VV67 1664 aaKnown RBP23.47■■□□□ 1.35
GABBR1-220ENST00000494877 FRMPD1Q5SYB0 1578 aa23.47■■□□□ 1.35
GABBR1-220ENST00000494877 NEFLP07196 543 aa23.45■■□□□ 1.35
GABBR1-220ENST00000494877 FKBP8Q14318 412 aa23.45■■□□□ 1.34
GABBR1-220ENST00000494877 TMF1P82094 1093 aa23.43■■□□□ 1.34
GABBR1-220ENST00000494877 CNGB1Q14028 1251 aaPredicted RBP23.43■■□□□ 1.34
GABBR1-220ENST00000494877 RALBP1Q15311 655 aa23.43■■□□□ 1.34
GABBR1-220ENST00000494877 DISP3Q9P2K9 1392 aa23.43■■□□□ 1.34
GABBR1-220ENST00000494877 KIF1BO60333 1816 aa23.43■■□□□ 1.34
GABBR1-220ENST00000494877 ABCA6Q8N139 1617 aa23.42■■□□□ 1.34
GABBR1-220ENST00000494877 ZBED9Q6R2W3 1325 aa23.42■■□□□ 1.34
GABBR1-220ENST00000494877 IQGAP1P46940 1657 aa23.42■■□□□ 1.34
GABBR1-220ENST00000494877 UGGT1Q9NYU2 1555 aa23.41■■□□□ 1.34
GABBR1-220ENST00000494877 KIAA1210Q9ULL0 1709 aa23.4■■□□□ 1.34
GABBR1-220ENST00000494877 SCAF11Q99590 1463 aaKnown RBP23.39■■□□□ 1.33
GABBR1-220ENST00000494877 GGT6Q6P531 493 aa23.38■■□□□ 1.33
GABBR1-220ENST00000494877 MYOM2P54296 1465 aa23.38■■□□□ 1.33
GABBR1-220ENST00000494877 MYBBP1AQ9BQG0 1328 aaKnown RBP23.38■■□□□ 1.33
GABBR1-220ENST00000494877 TSPOAP1O95153 1857 aa23.38■■□□□ 1.33
GABBR1-220ENST00000494877 PER1O15534 1290 aaPredicted RBP23.37■■□□□ 1.33
GABBR1-220ENST00000494877 TMC1Q8TDI8 760 aa23.37■■□□□ 1.33
GABBR1-220ENST00000494877 WASHC2CQ9Y4E1 1318 aa23.37■■□□□ 1.33
GABBR1-220ENST00000494877 NPATQ14207 1427 aa23.36■■□□□ 1.33
GABBR1-220ENST00000494877 BRD4O60885 1362 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms