RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 KIF3BO15066 747 aa25.54■■□□□ 1.68
COL4A2-209ENST00000494852 RSPH4AQ5TD94 716 aa25.54■■□□□ 1.68
COL4A2-209ENST00000494852 TNRQ92752 1358 aa25.54■■□□□ 1.68
COL4A2-209ENST00000494852 PZPP20742 1482 aa25.53■■□□□ 1.68
COL4A2-209ENST00000494852 FBXO31Q5XUX0 539 aaPredicted RBP25.53■■□□□ 1.68
COL4A2-209ENST00000494852 KDM5DQ9BY66 1539 aa25.53■■□□□ 1.68
COL4A2-209ENST00000494852 CCDC141Q6ZP82 1450 aa25.52■■□□□ 1.68
COL4A2-209ENST00000494852 CPS1P31327 1500 aa25.51■■□□□ 1.67
COL4A2-209ENST00000494852 POLR1AO95602 1720 aaPredicted RBP25.51■■□□□ 1.67
COL4A2-209ENST00000494852 NEURL4Q96JN8 1562 aa25.5■■□□□ 1.67
COL4A2-209ENST00000494852 WASHC2CQ9Y4E1 1318 aa25.49■■□□□ 1.67
COL4A2-209ENST00000494852 SHANK2Q9UPX8 1470 aa25.48■■□□□ 1.67
COL4A2-209ENST00000494852 TOM1O60784 492 aa25.47■■□□□ 1.67
COL4A2-209ENST00000494852 ANKLE2Q86XL3 938 aa25.47■■□□□ 1.67
COL4A2-209ENST00000494852 CAMSAP2Q08AD1 1489 aa25.47■■□□□ 1.67
COL4A2-209ENST00000494852 THEMISQ8N1K5 641 aaPredicted RBP25.46■■□□□ 1.67
COL4A2-209ENST00000494852 NCOA2Q15596 1464 aa25.46■■□□□ 1.67
COL4A2-209ENST00000494852 MIA2Q96PC5 1412 aa25.46■■□□□ 1.67
COL4A2-209ENST00000494852 NLRP1Q9C000 1473 aa25.45■■□□□ 1.66
COL4A2-209ENST00000494852 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.44■■□□□ 1.66
COL4A2-209ENST00000494852 HSPA1LP34931 641 aa25.43■■□□□ 1.66
COL4A2-209ENST00000494852 PIP4K2BP78356 416 aa25.42■■□□□ 1.66
COL4A2-209ENST00000494852 MED14O60244 1454 aa25.41■■□□□ 1.66
COL4A2-209ENST00000494852 SCAF1Q9H7N4 1312 aaKnown RBP25.41■■□□□ 1.66
COL4A2-209ENST00000494852 ARHGEF5Q12774 1597 aa25.41■■□□□ 1.66
COL4A2-209ENST00000494852 UGGT1Q9NYU2 1555 aa25.4■■□□□ 1.66
COL4A2-209ENST00000494852 TSPY4P0CV99 314 aa25.4■■□□□ 1.66
COL4A2-209ENST00000494852 TSPY10P0CW01 314 aa25.4■■□□□ 1.66
COL4A2-209ENST00000494852 VWDEQ8N2E2 1590 aa25.39■■□□□ 1.66
COL4A2-209ENST00000494852 DEPDC5O75140 1603 aa25.39■■□□□ 1.66
COL4A2-209ENST00000494852 NPHP4O75161 1426 aaPredicted RBP25.37■■□□□ 1.65
COL4A2-209ENST00000494852 MED1Q15648 1581 aaPredicted RBP25.35■■□□□ 1.65
COL4A2-209ENST00000494852 RNF17Q9BXT8 1623 aaKnown RBP25.32■■□□□ 1.64
COL4A2-209ENST00000494852 IQGAP1P46940 1657 aa25.3■■□□□ 1.64
COL4A2-209ENST00000494852 ABCC3O15438 1527 aa25.3■■□□□ 1.64
COL4A2-209ENST00000494852 ALKQ9UM73 1620 aa25.3■■□□□ 1.64
COL4A2-209ENST00000494852 ZC3H13Q5T200 1668 aaKnown RBP25.29■■□□□ 1.64
COL4A2-209ENST00000494852 MAST1Q9Y2H9 1570 aa25.29■■□□□ 1.64
COL4A2-209ENST00000494852 LRRC9Q6ZRR7 1453 aa25.26■■□□□ 1.63
COL4A2-209ENST00000494852 EIF2AK4Q9P2K8 1649 aaKnown RBP25.26■■□□□ 1.63
COL4A2-209ENST00000494852 ERVK-7P63135 1459 aa25.25■■□□□ 1.63
COL4A2-209ENST00000494852 LRRC7Q96NW7 1537 aa25.24■■□□□ 1.63
COL4A2-209ENST00000494852 STRCP1A6NGW2 1772 aa25.22■■□□□ 1.63
COL4A2-209ENST00000494852 MROH1Q8NDA8 1641 aa25.21■■□□□ 1.63
COL4A2-209ENST00000494852 SYNMO15061 1565 aa25.21■■□□□ 1.63
COL4A2-209ENST00000494852 VPS8Q8N3P4 1428 aa25.19■■□□□ 1.62
COL4A2-209ENST00000494852 PHF23Q9BUL5 403 aaPredicted RBP25.18■■□□□ 1.62
COL4A2-209ENST00000494852 UBR1Q8IWV7 1749 aa25.17■■□□□ 1.62
COL4A2-209ENST00000494852 DUOX2Q9NRD8 1548 aa25.16■■□□□ 1.62
COL4A2-209ENST00000494852 SCAF11Q99590 1463 aaKnown RBP25.15■■□□□ 1.62
COL4A2-209ENST00000494852 MYOM3Q5VTT5 1437 aa25.15■■□□□ 1.62
COL4A2-209ENST00000494852 MAP3K1Q13233 1512 aa25.15■■□□□ 1.62
COL4A2-209ENST00000494852 CEP152O94986 1710 aa25.14■■□□□ 1.61
COL4A2-209ENST00000494852 ARHGAP23Q9P227 1491 aa25.14■■□□□ 1.61
COL4A2-209ENST00000494852 ARHGAP31Q2M1Z3 1444 aa25.13■■□□□ 1.61
COL4A2-209ENST00000494852 KANK4Q5T7N3 995 aaPredicted RBP25.13■■□□□ 1.61
COL4A2-209ENST00000494852 SLIT1O75093 1534 aa25.12■■□□□ 1.61
COL4A2-209ENST00000494852 LTKP29376 864 aa25.12■■□□□ 1.61
COL4A2-209ENST00000494852 TXNDC2Q86VQ3 553 aa25.11■■□□□ 1.61
COL4A2-209ENST00000494852 CFAP65Q6ZU64 1925 aaKnown RBP25.1■■□□□ 1.61
COL4A2-209ENST00000494852 PRDM15P57071 1507 aaPredicted RBP25.09■■□□□ 1.61
COL4A2-209ENST00000494852 ERBINQ96RT1 1412 aa25.07■■□□□ 1.6
COL4A2-209ENST00000494852 EID1Q9Y6B2 187 aa25.07■■□□□ 1.6
COL4A2-209ENST00000494852 KIF15Q9NS87 1388 aa25.06■■□□□ 1.6
COL4A2-209ENST00000494852 SENP3Q9H4L4 574 aaPredicted RBP25.06■■□□□ 1.6
COL4A2-209ENST00000494852 TMEM2Q9UHN6 1383 aa25.03■■□□□ 1.6
COL4A2-209ENST00000494852 ABCC5O15440 1437 aa25.03■■□□□ 1.6
COL4A2-209ENST00000494852 RRP7BPQ9NSQ0 103 aa25.02■■□□□ 1.6
COL4A2-209ENST00000494852 XIRP1Q702N8 1843 aaKnown RBP25.01■■□□□ 1.59
COL4A2-209ENST00000494852 PIK3C2BO00750 1634 aa25■■□□□ 1.59
COL4A2-209ENST00000494852 CROCC2H7BZ55 1655 aa25■■□□□ 1.59
COL4A2-209ENST00000494852 LOC105371045A0A1W2PR82 267 aa24.99■■□□□ 1.59
COL4A2-209ENST00000494852 FAM135BQ49AJ0 1406 aa24.98■■□□□ 1.59
COL4A2-209ENST00000494852 KANK1Q14678 1352 aa24.98■■□□□ 1.59
COL4A2-209ENST00000494852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.98■■□□□ 1.59
COL4A2-209ENST00000494852 KDM5AP29375 1690 aaKnown RBP24.97■■□□□ 1.59
COL4A2-209ENST00000494852 RGS17Q9UGC6 210 aaPredicted RBP24.97■■□□□ 1.59
COL4A2-209ENST00000494852 STAG3Q9UJ98 1225 aa24.97■■□□□ 1.59
COL4A2-209ENST00000494852 PTPN23Q9H3S7 1636 aa24.95■■□□□ 1.58
COL4A2-209ENST00000494852 LMTK2Q8IWU2 1503 aa24.95■■□□□ 1.58
COL4A2-209ENST00000494852 DAPK1P53355 1430 aa24.95■■□□□ 1.58
COL4A2-209ENST00000494852 IDI1Q13907 227 aa24.94■■□□□ 1.58
COL4A2-209ENST00000494852 EFCAB6Q5THR3 1501 aa24.94■■□□□ 1.58
COL4A2-209ENST00000494852 KCNA6P17658 529 aa24.93■■□□□ 1.58
COL4A2-209ENST00000494852 TMEM94Q12767 1356 aa24.93■■□□□ 1.58
COL4A2-209ENST00000494852 TET3O43151 1660 aa24.91■■□□□ 1.58
COL4A2-209ENST00000494852 ANKRD30AQ9BXX3 1397 aa24.9■■□□□ 1.58
COL4A2-209ENST00000494852 NOS1P29475 1434 aa24.87■■□□□ 1.57
COL4A2-209ENST00000494852 FGD6Q6ZV73 1430 aa24.87■■□□□ 1.57
COL4A2-209ENST00000494852 APLP2Q06481 763 aa24.86■■□□□ 1.57
COL4A2-209ENST00000494852 PROSER2Q86WR7 435 aaPredicted RBP24.86■■□□□ 1.57
COL4A2-209ENST00000494852 SLC26A8Q96RN1 970 aa24.86■■□□□ 1.57
COL4A2-209ENST00000494852 SLC52A1Q9NWF4 448 aa24.84■■□□□ 1.57
COL4A2-209ENST00000494852 CHIC2Q9UKJ5 165 aa24.84■■□□□ 1.57
COL4A2-209ENST00000494852 ADGRB3O60242 1522 aa24.83■■□□□ 1.57
COL4A2-209ENST00000494852 ROBO1Q9Y6N7 1651 aa24.83■■□□□ 1.57
COL4A2-209ENST00000494852 NKTRP30414 1462 aaKnown RBP24.83■■□□□ 1.56
COL4A2-209ENST00000494852 NWD1Q149M9 1564 aa24.82■■□□□ 1.56
COL4A2-209ENST00000494852 RBM33Q96EV2 1170 aaKnown RBP24.8■■□□□ 1.56
COL4A2-209ENST00000494852 POTEAQ6S8J7 498 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms