RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 KIF15Q9NS87 1388 aa27.16■■□□□ 1.94
HDAC4-211ENST00000494800 WASHC2CQ9Y4E1 1318 aa27.16■■□□□ 1.94
HDAC4-211ENST00000494800 EIF2AK4Q9P2K8 1649 aaKnown RBP27.14■■□□□ 1.94
HDAC4-211ENST00000494800 KDM5DQ9BY66 1539 aa27.14■■□□□ 1.94
HDAC4-211ENST00000494800 SETD1BQ9UPS6 1966 aaKnown RBP27.13■■□□□ 1.93
HDAC4-211ENST00000494800 ANKRD30AQ9BXX3 1397 aa27.13■■□□□ 1.93
HDAC4-211ENST00000494800 RRP7BPQ9NSQ0 103 aa27.13■■□□□ 1.93
HDAC4-211ENST00000494800 ERBINQ96RT1 1412 aa27.1■■□□□ 1.93
HDAC4-211ENST00000494800 CHIC2Q9UKJ5 165 aa27.1■■□□□ 1.93
HDAC4-211ENST00000494800 RNF17Q9BXT8 1623 aaKnown RBP27.08■■□□□ 1.93
HDAC4-211ENST00000494800 PPARGC1BQ86YN6 1023 aaKnown RBP27.08■■□□□ 1.93
HDAC4-211ENST00000494800 PTPRKQ15262 1439 aa27.07■■□□□ 1.92
HDAC4-211ENST00000494800 NCOA1Q15788 1441 aa27.04■■□□□ 1.92
HDAC4-211ENST00000494800 ADGRL2O95490 1459 aa27.02■■□□□ 1.92
HDAC4-211ENST00000494800 ZC3H13Q5T200 1668 aaKnown RBP27.01■■□□□ 1.92
HDAC4-211ENST00000494800 PZPP20742 1482 aa27.01■■□□□ 1.91
HDAC4-211ENST00000494800 DMRT2Q9Y5R5 561 aa26.99■■□□□ 1.91
HDAC4-211ENST00000494800 ABCC3O15438 1527 aa26.99■■□□□ 1.91
HDAC4-211ENST00000494800 KANK1Q14678 1352 aa26.98■■□□□ 1.91
HDAC4-211ENST00000494800 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.97■■□□□ 1.91
HDAC4-211ENST00000494800 MYO3AQ8NEV4 1616 aa26.97■■□□□ 1.91
HDAC4-211ENST00000494800 TNRQ92752 1358 aa26.96■■□□□ 1.91
HDAC4-211ENST00000494800 PRDM15P57071 1507 aaPredicted RBP26.95■■□□□ 1.91
HDAC4-211ENST00000494800 MROH1Q8NDA8 1641 aa26.95■■□□□ 1.91
HDAC4-211ENST00000494800 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.95■■□□□ 1.9
HDAC4-211ENST00000494800 FBXO31Q5XUX0 539 aaPredicted RBP26.94■■□□□ 1.9
HDAC4-211ENST00000494800 CEP170BQ9Y4F5 1589 aaPredicted RBP26.92■■□□□ 1.9
HDAC4-211ENST00000494800 ZNF142P52746 1687 aaPredicted RBP26.92■■□□□ 1.9
HDAC4-211ENST00000494800 ANKRD50Q9ULJ7 1429 aa26.9■■□□□ 1.9
HDAC4-211ENST00000494800 DEPDC5O75140 1603 aa26.9■■□□□ 1.9
HDAC4-211ENST00000494800 A2ML1A8K2U0 1454 aa26.9■■□□□ 1.9
HDAC4-211ENST00000494800 ROCK1Q13464 1354 aa26.9■■□□□ 1.9
HDAC4-211ENST00000494800 ITGAEP38570 1179 aa26.9■■□□□ 1.9
HDAC4-211ENST00000494800 CAMSAP1Q5T5Y3 1602 aa26.88■■□□□ 1.89
HDAC4-211ENST00000494800 CEP152O94986 1710 aa26.87■■□□□ 1.89
HDAC4-211ENST00000494800 NLRP1Q9C000 1473 aa26.87■■□□□ 1.89
HDAC4-211ENST00000494800 RRBP1Q9P2E9 1410 aaKnown RBP26.85■■□□□ 1.89
HDAC4-211ENST00000494800 STRCQ7RTU9 1775 aa26.85■■□□□ 1.89
HDAC4-211ENST00000494800 ARHGAP31Q2M1Z3 1444 aa26.84■■□□□ 1.89
HDAC4-211ENST00000494800 PLA2R1Q13018 1463 aa26.84■■□□□ 1.89
HDAC4-211ENST00000494800 PTPRTO14522 1441 aa26.83■■□□□ 1.89
HDAC4-211ENST00000494800 ERVK-7P63135 1459 aa26.83■■□□□ 1.89
HDAC4-211ENST00000494800 SPATA31D1Q6ZQQ2 1576 aa26.83■■□□□ 1.89
HDAC4-211ENST00000494800 PKD2Q13563 968 aa26.82■■□□□ 1.88
HDAC4-211ENST00000494800 LMTK2Q8IWU2 1503 aa26.8■■□□□ 1.88
HDAC4-211ENST00000494800 THEMISQ8N1K5 641 aaPredicted RBP26.8■■□□□ 1.88
HDAC4-211ENST00000494800 VWDEQ8N2E2 1590 aa26.79■■□□□ 1.88
HDAC4-211ENST00000494800 NCKAP5LQ9HCH0 1330 aa26.77■■□□□ 1.88
HDAC4-211ENST00000494800 UGGT1Q9NYU2 1555 aa26.76■■□□□ 1.87
HDAC4-211ENST00000494800 EFCAB6Q5THR3 1501 aa26.72■■□□□ 1.87
HDAC4-211ENST00000494800 UNC13BO14795 1591 aa26.71■■□□□ 1.87
HDAC4-211ENST00000494800 ANKLE2Q86XL3 938 aa26.7■■□□□ 1.86
HDAC4-211ENST00000494800 RPRD2Q5VT52 1461 aaKnown RBP26.68■■□□□ 1.86
HDAC4-211ENST00000494800 ILDR1Q86SU0 546 aaPredicted RBP26.67■■□□□ 1.86
HDAC4-211ENST00000494800 CERKQ8TCT0 537 aa26.66■■□□□ 1.86
HDAC4-211ENST00000494800 CFAP65Q6ZU64 1925 aaKnown RBP26.66■■□□□ 1.86
HDAC4-211ENST00000494800 STAG3Q9UJ98 1225 aa26.65■■□□□ 1.86
HDAC4-211ENST00000494800 TET3O43151 1660 aa26.64■■□□□ 1.86
HDAC4-211ENST00000494800 NUP155O75694 1391 aa26.64■■□□□ 1.86
HDAC4-211ENST00000494800 FBXO41Q8TF61 875 aa26.64■■□□□ 1.86
HDAC4-211ENST00000494800 POLR1AO95602 1720 aaPredicted RBP26.62■■□□□ 1.85
HDAC4-211ENST00000494800 SLC52A1Q9NWF4 448 aa26.61■■□□□ 1.85
HDAC4-211ENST00000494800 NOS1P29475 1434 aa26.61■■□□□ 1.85
HDAC4-211ENST00000494800 IQGAP3Q86VI3 1631 aa26.6■■□□□ 1.85
HDAC4-211ENST00000494800 GCC2Q8IWJ2 1684 aa26.6■■□□□ 1.85
HDAC4-211ENST00000494800 UBR1Q8IWV7 1749 aa26.59■■□□□ 1.85
HDAC4-211ENST00000494800 NAIPQ13075 1403 aa26.57■■□□□ 1.84
HDAC4-211ENST00000494800 IDI1Q13907 227 aa26.57■■□□□ 1.84
HDAC4-211ENST00000494800 SYNMO15061 1565 aa26.56■■□□□ 1.84
HDAC4-211ENST00000494800 NEURL4Q96JN8 1562 aa26.56■■□□□ 1.84
HDAC4-211ENST00000494800 EID1Q9Y6B2 187 aa26.56■■□□□ 1.84
HDAC4-211ENST00000494800 PIK3C2BO00750 1634 aa26.56■■□□□ 1.84
HDAC4-211ENST00000494800 HFM1A2PYH4 1435 aa26.56■■□□□ 1.84
HDAC4-211ENST00000494800 NPHP4O75161 1426 aaPredicted RBP26.56■■□□□ 1.84
HDAC4-211ENST00000494800 MED14O60244 1454 aa26.55■■□□□ 1.84
HDAC4-211ENST00000494800 ZNF335Q9H4Z2 1342 aaPredicted RBP26.53■■□□□ 1.84
HDAC4-211ENST00000494800 SLIT1O75093 1534 aa26.53■■□□□ 1.84
HDAC4-211ENST00000494800 KDM5AP29375 1690 aaKnown RBP26.53■■□□□ 1.84
HDAC4-211ENST00000494800 TXNDC2Q86VQ3 553 aa26.52■■□□□ 1.84
HDAC4-211ENST00000494800 LTBP4Q8N2S1 1624 aa26.52■■□□□ 1.84
HDAC4-211ENST00000494800 SCAF11Q99590 1463 aaKnown RBP26.52■■□□□ 1.84
HDAC4-211ENST00000494800 ARHGAP23Q9P227 1491 aa26.51■■□□□ 1.83
HDAC4-211ENST00000494800 TMEM2Q9UHN6 1383 aa26.5■■□□□ 1.83
HDAC4-211ENST00000494800 E9PCH4 1651 aa26.5■■□□□ 1.83
HDAC4-211ENST00000494800 ADGRB3O60242 1522 aa26.49■■□□□ 1.83
HDAC4-211ENST00000494800 IQGAP1P46940 1657 aa26.48■■□□□ 1.83
HDAC4-211ENST00000494800 IQSEC2Q5JU85 1478 aa26.47■■□□□ 1.83
HDAC4-211ENST00000494800 TRIM52Q96A61 297 aa26.46■■□□□ 1.83
HDAC4-211ENST00000494800 LTKP29376 864 aa26.45■■□□□ 1.82
HDAC4-211ENST00000494800 HDGFP51858 240 aaKnown RBP26.44■■□□□ 1.82
HDAC4-211ENST00000494800 CHGAP10645 457 aaKnown RBP26.42■■□□□ 1.82
HDAC4-211ENST00000494800 CPS1P31327 1500 aa26.41■■□□□ 1.82
HDAC4-211ENST00000494800 ACIN1Q9UKV3 1341 aaKnown RBP26.38■■□□□ 1.81
HDAC4-211ENST00000494800 PPP1R15AO75807 674 aaPredicted RBP26.37■■□□□ 1.81
HDAC4-211ENST00000494800 SLC4A1APQ9BWU0 796 aaKnown RBP26.36■■□□□ 1.81
HDAC4-211ENST00000494800 TMEM131LA2VDJ0 1609 aa26.36■■□□□ 1.81
HDAC4-211ENST00000494800 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.35■■□□□ 1.81
HDAC4-211ENST00000494800 BCANQ96GW7 911 aa26.35■■□□□ 1.81
HDAC4-211ENST00000494800 SPHKAPQ2M3C7 1700 aa26.34■■□□□ 1.81
HDAC4-211ENST00000494800 RIMS2Q9UQ26 1411 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms