RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 ZNF644Q9H582 1327 aaPredicted RBP12.16□□□□□ -0.46
RAF1-212ENST00000494557 ARHGAP5Q13017 1502 aa12.16□□□□□ -0.46
RAF1-212ENST00000494557 MAP3K4Q9Y6R4 1608 aa12.15□□□□□ -0.46
RAF1-212ENST00000494557 CLTCL1P53675 1640 aa12.15□□□□□ -0.46
RAF1-212ENST00000494557 WASHC2AQ641Q2 1341 aa12.14□□□□□ -0.47
RAF1-212ENST00000494557 SYNMO15061 1565 aa12.14□□□□□ -0.47
RAF1-212ENST00000494557 GTF3C3Q9Y5Q9 886 aa12.14□□□□□ -0.47
RAF1-212ENST00000494557 PRAG1Q86YV5 1406 aa12.14□□□□□ -0.47
RAF1-212ENST00000494557 PPLO60437 1756 aa12.14□□□□□ -0.47
RAF1-212ENST00000494557 ATP7AQ04656 1500 aa12.14□□□□□ -0.47
RAF1-212ENST00000494557 RICTORQ6R327 1708 aa12.13□□□□□ -0.47
RAF1-212ENST00000494557 EFCAB6Q5THR3 1501 aa12.13□□□□□ -0.47
RAF1-212ENST00000494557 KIF15Q9NS87 1388 aa12.13□□□□□ -0.47
RAF1-212ENST00000494557 GLI2P10070 1586 aa12.13□□□□□ -0.47
RAF1-212ENST00000494557 SETBP1Q9Y6X0 1596 aa12.12□□□□□ -0.47
RAF1-212ENST00000494557 KIF1BO60333 1816 aa12.12□□□□□ -0.47
RAF1-212ENST00000494557 A2MP01023 1474 aa12.12□□□□□ -0.47
RAF1-212ENST00000494557 FRMPD1Q5SYB0 1578 aa12.12□□□□□ -0.47
RAF1-212ENST00000494557 HECW2Q9P2P5 1572 aa12.12□□□□□ -0.47
RAF1-212ENST00000494557 KTN1Q86UP2 1357 aaKnown RBP12.12□□□□□ -0.47
RAF1-212ENST00000494557 MROH2AA6NES4 1674 aa12.12□□□□□ -0.47
RAF1-212ENST00000494557 MYOM2P54296 1465 aa12.11□□□□□ -0.47
RAF1-212ENST00000494557 ZNF518AQ6AHZ1 1483 aa12.11□□□□□ -0.47
RAF1-212ENST00000494557 USP32Q8NFA0 1604 aa12.11□□□□□ -0.47
RAF1-212ENST00000494557 REREQ9P2R6 1566 aa12.11□□□□□ -0.47
RAF1-212ENST00000494557 PPRC1Q5VV67 1664 aaKnown RBP12.11□□□□□ -0.47
RAF1-212ENST00000494557 ITGAEP38570 1179 aa12.11□□□□□ -0.47
RAF1-212ENST00000494557 SCAPERQ9BY12 1400 aa12.1□□□□□ -0.47
RAF1-212ENST00000494557 CFDP1Q9UEE9 299 aaPredicted RBP12.1□□□□□ -0.47
RAF1-212ENST00000494557 COL17A1Q9UMD9 1497 aaPredicted RBP12.1□□□□□ -0.47
RAF1-212ENST00000494557 ROCK2O75116 1388 aaKnown RBP12.08□□□□□ -0.48
RAF1-212ENST00000494557 L3MBTL2Q969R5 705 aa12.08□□□□□ -0.48
RAF1-212ENST00000494557 NBPF8Q3BBV2 869 aa12.07□□□□□ -0.48
RAF1-212ENST00000494557 RRP7BPQ9NSQ0 103 aa12.07□□□□□ -0.48
RAF1-212ENST00000494557 ADGRB3O60242 1522 aa12.07□□□□□ -0.48
RAF1-212ENST00000494557 PLEKHD1A6NEE1 506 aa12.06□□□□□ -0.48
RAF1-212ENST00000494557 ABCA6Q8N139 1617 aa12.05□□□□□ -0.48
RAF1-212ENST00000494557 MLH3Q9UHC1 1453 aa12.04□□□□□ -0.48
RAF1-212ENST00000494557 SIGLEC1Q9BZZ2 1709 aa12.04□□□□□ -0.48
RAF1-212ENST00000494557 CAMSAP1Q5T5Y3 1602 aa12.04□□□□□ -0.48
RAF1-212ENST00000494557 HSPA5P11021 654 aaKnown RBP12.04□□□□□ -0.48
RAF1-212ENST00000494557 FANCAO15360 1455 aa12.03□□□□□ -0.48
RAF1-212ENST00000494557 LRPPRCP42704 1394 aaKnown RBP12.02□□□□□ -0.48
RAF1-212ENST00000494557 EIF4G2P78344 907 aaKnown RBP eCLIP12.01□□□□□ -0.49
RAF1-212ENST00000494557 ATP1B4Q9UN42 357 aaPredicted RBP12.01□□□□□ -0.49
RAF1-212ENST00000494557 TRAPPC8Q9Y2L5 1435 aa12.01□□□□□ -0.49
RAF1-212ENST00000494557 KDM5AP29375 1690 aaKnown RBP12□□□□□ -0.49
RAF1-212ENST00000494557 USP47Q96K76 1375 aa12□□□□□ -0.49
RAF1-212ENST00000494557 CLTCQ00610 1675 aaKnown RBP12□□□□□ -0.49
RAF1-212ENST00000494557 KIF7Q2M1P5 1343 aa12□□□□□ -0.49
RAF1-212ENST00000494557 C11orf95C9JLR9 678 aaPredicted RBP11.99□□□□□ -0.49
RAF1-212ENST00000494557 SUPT16HQ9Y5B9 1047 aaKnown RBP11.99□□□□□ -0.49
RAF1-212ENST00000494557 STAC3Q96MF2 364 aa11.99□□□□□ -0.49
RAF1-212ENST00000494557 NEO1Q92859 1461 aa11.98□□□□□ -0.49
RAF1-212ENST00000494557 DIP2CQ9Y2E4 1556 aa11.98□□□□□ -0.49
RAF1-212ENST00000494557 SETD1AO15047 1707 aaKnown RBP11.97□□□□□ -0.49
RAF1-212ENST00000494557 NUP155O75694 1391 aa11.97□□□□□ -0.49
RAF1-212ENST00000494557 RNF123Q5XPI4 1314 aa11.97□□□□□ -0.49
RAF1-212ENST00000494557 ERICH6BQ5W0A0 696 aa11.97□□□□□ -0.49
RAF1-212ENST00000494557 CHIC2Q9UKJ5 165 aa11.97□□□□□ -0.49
RAF1-212ENST00000494557 ANKRD26Q9UPS8 1709 aa11.97□□□□□ -0.49
RAF1-212ENST00000494557 UGGT1Q9NYU2 1555 aa11.96□□□□□ -0.49
RAF1-212ENST00000494557 ARHGEF28Q8N1W1 1705 aaKnown RBP11.96□□□□□ -0.5
RAF1-212ENST00000494557 POGZQ7Z3K3 1410 aa11.96□□□□□ -0.5
RAF1-212ENST00000494557 SLC4A1APQ9BWU0 796 aaKnown RBP11.96□□□□□ -0.5
RAF1-212ENST00000494557 PARD3Q8TEW0 1356 aa11.95□□□□□ -0.5
RAF1-212ENST00000494557 DDX10Q13206 875 aaKnown RBP11.95□□□□□ -0.5
RAF1-212ENST00000494557 KCNH8Q96L42 1107 aa11.95□□□□□ -0.5
RAF1-212ENST00000494557 PRKRIP1Q9H875 184 aaPredicted RBP11.95□□□□□ -0.5
RAF1-212ENST00000494557 ADGRB1O14514 1584 aa11.95□□□□□ -0.5
RAF1-212ENST00000494557 CCDC144AA2RUR9 1427 aa11.95□□□□□ -0.5
RAF1-212ENST00000494557 DAXXQ9UER7 740 aaPredicted RBP11.94□□□□□ -0.5
RAF1-212ENST00000494557 WASHC2CQ9Y4E1 1318 aa11.94□□□□□ -0.5
RAF1-212ENST00000494557 ANP32CO43423 234 aa11.93□□□□□ -0.5
RAF1-212ENST00000494557 SBNO2Q9Y2G9 1366 aa11.93□□□□□ -0.5
RAF1-212ENST00000494557 BLMP54132 1417 aaPredicted RBP11.93□□□□□ -0.5
RAF1-212ENST00000494557 ARHGAP31Q2M1Z3 1444 aa11.93□□□□□ -0.5
RAF1-212ENST00000494557 NPC1L1Q9UHC9 1359 aa11.93□□□□□ -0.5
RAF1-212ENST00000494557 ASXL2Q76L83 1435 aa11.92□□□□□ -0.5
RAF1-212ENST00000494557 PKD2Q13563 968 aa11.92□□□□□ -0.5
RAF1-212ENST00000494557 SMG6Q86US8 1419 aaKnown RBP11.92□□□□□ -0.5
RAF1-212ENST00000494557 ABCC3O15438 1527 aa11.92□□□□□ -0.5
RAF1-212ENST00000494557 SHPRHQ149N8 1683 aa11.92□□□□□ -0.5
RAF1-212ENST00000494557 ZBED9Q6R2W3 1325 aa11.92□□□□□ -0.5
RAF1-212ENST00000494557 PREX1Q8TCU6 1659 aa11.91□□□□□ -0.5
RAF1-212ENST00000494557 QRICH2Q9H0J4 1663 aa11.91□□□□□ -0.5
RAF1-212ENST00000494557 ADGRL1O94910 1474 aa11.91□□□□□ -0.5
RAF1-212ENST00000494557 BRD4O60885 1362 aaPredicted RBP11.89□□□□□ -0.51
RAF1-212ENST00000494557 NEXMIFQ5QGS0 1516 aa11.89□□□□□ -0.51
RAF1-212ENST00000494557 AGLP35573 1532 aa11.88□□□□□ -0.51
RAF1-212ENST00000494557 NOS1P29475 1434 aa11.88□□□□□ -0.51
RAF1-212ENST00000494557 DIP2BQ9P265 1576 aa11.88□□□□□ -0.51
RAF1-212ENST00000494557 TSPY4P0CV99 314 aa11.88□□□□□ -0.51
RAF1-212ENST00000494557 TSPY10P0CW01 314 aa11.88□□□□□ -0.51
RAF1-212ENST00000494557 KNDC1Q76NI1 1749 aa11.88□□□□□ -0.51
RAF1-212ENST00000494557 SCAF11Q99590 1463 aaKnown RBP11.88□□□□□ -0.51
RAF1-212ENST00000494557 TMEM131LA2VDJ0 1609 aa11.87□□□□□ -0.51
RAF1-212ENST00000494557 FOXD1Q16676 465 aa11.87□□□□□ -0.51
RAF1-212ENST00000494557 TRIM52Q96A61 297 aa11.87□□□□□ -0.51
RAF1-212ENST00000494557 MYO5BQ9ULV0 1848 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms