RNA–Protein interactions for RNA: ENST00000494511.5

PMP22-206, Transcript of peripheral myelin protein 22, humanhuman

TSL 1 (best) BASIC

Gene PMP22, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-206ENST00000494511 CROCC2H7BZ55 1655 aa22.39■■□□□ 1.18
PMP22-206ENST00000494511 PTPRKQ15262 1439 aa22.39■■□□□ 1.17
PMP22-206ENST00000494511 WASHC2CQ9Y4E1 1318 aa22.38■■□□□ 1.17
PMP22-206ENST00000494511 DAPK1P53355 1430 aa22.38■■□□□ 1.17
PMP22-206ENST00000494511 DNMT1P26358 1616 aaKnown RBP22.37■■□□□ 1.17
PMP22-206ENST00000494511 FAM50AQ14320 339 aaKnown RBP22.36■■□□□ 1.17
PMP22-206ENST00000494511 PPARGC1BQ86YN6 1023 aaKnown RBP22.36■■□□□ 1.17
PMP22-206ENST00000494511 RRP7BPQ9NSQ0 103 aa22.36■■□□□ 1.17
PMP22-206ENST00000494511 CHIC2Q9UKJ5 165 aa22.36■■□□□ 1.17
PMP22-206ENST00000494511 KDM5DQ9BY66 1539 aa22.36■■□□□ 1.17
PMP22-206ENST00000494511 SHANK2Q9UPX8 1470 aa22.35■■□□□ 1.17
PMP22-206ENST00000494511 KIF15Q9NS87 1388 aa22.35■■□□□ 1.17
PMP22-206ENST00000494511 DUOX2Q9NRD8 1548 aa22.34■■□□□ 1.17
PMP22-206ENST00000494511 LTBP4Q8N2S1 1624 aa22.34■■□□□ 1.17
PMP22-206ENST00000494511 FBXO31Q5XUX0 539 aaPredicted RBP22.33■■□□□ 1.17
PMP22-206ENST00000494511 MYO3AQ8NEV4 1616 aa22.32■■□□□ 1.16
PMP22-206ENST00000494511 RNF17Q9BXT8 1623 aaKnown RBP22.32■■□□□ 1.16
PMP22-206ENST00000494511 NCOA1Q15788 1441 aa22.31■■□□□ 1.16
PMP22-206ENST00000494511 EIF2AK4Q9P2K8 1649 aaKnown RBP22.31■■□□□ 1.16
PMP22-206ENST00000494511 FAM135AQ9P2D6 1515 aa22.3■■□□□ 1.16
PMP22-206ENST00000494511 IQSEC2Q5JU85 1478 aa22.28■■□□□ 1.16
PMP22-206ENST00000494511 CAMSAP1Q5T5Y3 1602 aa22.28■■□□□ 1.16
PMP22-206ENST00000494511 DISP3Q9P2K9 1392 aa22.28■■□□□ 1.16
PMP22-206ENST00000494511 PZPP20742 1482 aa22.28■■□□□ 1.16
PMP22-206ENST00000494511 CEP170BQ9Y4F5 1589 aaPredicted RBP22.27■■□□□ 1.16
PMP22-206ENST00000494511 MROH1Q8NDA8 1641 aa22.27■■□□□ 1.16
PMP22-206ENST00000494511 ZNF142P52746 1687 aaPredicted RBP22.26■■□□□ 1.15
PMP22-206ENST00000494511 ABCC3O15438 1527 aa22.26■■□□□ 1.15
PMP22-206ENST00000494511 TNRQ92752 1358 aa22.26■■□□□ 1.15
PMP22-206ENST00000494511 ANKRD30AQ9BXX3 1397 aa22.26■■□□□ 1.15
PMP22-206ENST00000494511 SPATA31D1Q6ZQQ2 1576 aa22.25■■□□□ 1.15
PMP22-206ENST00000494511 ERBINQ96RT1 1412 aa22.25■■□□□ 1.15
PMP22-206ENST00000494511 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.25■■□□□ 1.15
PMP22-206ENST00000494511 CEP152O94986 1710 aa22.25■■□□□ 1.15
PMP22-206ENST00000494511 ILDR2Q71H61 639 aa22.24■■□□□ 1.15
PMP22-206ENST00000494511 CFAP65Q6ZU64 1925 aaKnown RBP22.23■■□□□ 1.15
PMP22-206ENST00000494511 ZC3H13Q5T200 1668 aaKnown RBP22.23■■□□□ 1.15
PMP22-206ENST00000494511 NCKAP5LQ9HCH0 1330 aa22.23■■□□□ 1.15
PMP22-206ENST00000494511 A2ML1A8K2U0 1454 aa22.22■■□□□ 1.15
PMP22-206ENST00000494511 PRDM15P57071 1507 aaPredicted RBP22.18■■□□□ 1.14
PMP22-206ENST00000494511 ADGRL2O95490 1459 aa22.18■■□□□ 1.14
PMP22-206ENST00000494511 PLA2R1Q13018 1463 aa22.16■■□□□ 1.14
PMP22-206ENST00000494511 ITGAEP38570 1179 aa22.16■■□□□ 1.14
PMP22-206ENST00000494511 DEPDC5O75140 1603 aa22.16■■□□□ 1.14
PMP22-206ENST00000494511 SOCS7O14512 581 aa22.15■■□□□ 1.14
PMP22-206ENST00000494511 ERVK-7P63135 1459 aa22.15■■□□□ 1.14
PMP22-206ENST00000494511 KANK1Q14678 1352 aa22.14■■□□□ 1.14
PMP22-206ENST00000494511 PKD2Q13563 968 aa22.13■■□□□ 1.13
PMP22-206ENST00000494511 NLRP1Q9C000 1473 aa22.13■■□□□ 1.13
PMP22-206ENST00000494511 ANKRD50Q9ULJ7 1429 aa22.11■■□□□ 1.13
PMP22-206ENST00000494511 UGGT1Q9NYU2 1555 aa22.1■■□□□ 1.13
PMP22-206ENST00000494511 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.1■■□□□ 1.13
PMP22-206ENST00000494511 ZNF335Q9H4Z2 1342 aaPredicted RBP22.09■■□□□ 1.13
PMP22-206ENST00000494511 THEMISQ8N1K5 641 aaPredicted RBP22.09■■□□□ 1.13
PMP22-206ENST00000494511 ARHGAP31Q2M1Z3 1444 aa22.08■■□□□ 1.13
PMP22-206ENST00000494511 VWDEQ8N2E2 1590 aa22.07■■□□□ 1.12
PMP22-206ENST00000494511 POLR1AO95602 1720 aaPredicted RBP22.06■■□□□ 1.12
PMP22-206ENST00000494511 LMTK2Q8IWU2 1503 aa22.05■■□□□ 1.12
PMP22-206ENST00000494511 ANKLE2Q86XL3 938 aa22.04■■□□□ 1.12
PMP22-206ENST00000494511 ROCK1Q13464 1354 aa22.03■■□□□ 1.12
PMP22-206ENST00000494511 NEURL4Q96JN8 1562 aa22.03■■□□□ 1.12
PMP22-206ENST00000494511 UBAP1LF5GYI3 381 aa22.01■■□□□ 1.11
PMP22-206ENST00000494511 EFCAB6Q5THR3 1501 aa22.01■■□□□ 1.11
PMP22-206ENST00000494511 UBR1Q8IWV7 1749 aa22■■□□□ 1.11
PMP22-206ENST00000494511 RRBP1Q9P2E9 1410 aaKnown RBP21.97■■□□□ 1.11
PMP22-206ENST00000494511 UNC13BO14795 1591 aa21.96■■□□□ 1.11
PMP22-206ENST00000494511 PIK3C2BO00750 1634 aa21.96■■□□□ 1.11
PMP22-206ENST00000494511 NPHP4O75161 1426 aaPredicted RBP21.96■■□□□ 1.11
PMP22-206ENST00000494511 SYNMO15061 1565 aa21.95■■□□□ 1.11
PMP22-206ENST00000494511 STAG3Q9UJ98 1225 aa21.95■■□□□ 1.1
PMP22-206ENST00000494511 IDI1Q13907 227 aa21.94■■□□□ 1.1
PMP22-206ENST00000494511 TET3O43151 1660 aa21.94■■□□□ 1.1
PMP22-206ENST00000494511 NOS1P29475 1434 aa21.93■■□□□ 1.1
PMP22-206ENST00000494511 CPS1P31327 1500 aa21.92■■□□□ 1.1
PMP22-206ENST00000494511 MED14O60244 1454 aa21.92■■□□□ 1.1
PMP22-206ENST00000494511 IQGAP1P46940 1657 aa21.91■■□□□ 1.1
PMP22-206ENST00000494511 GCC2Q8IWJ2 1684 aa21.91■■□□□ 1.1
PMP22-206ENST00000494511 NUP155O75694 1391 aa21.9■■□□□ 1.1
PMP22-206ENST00000494511 LTKP29376 864 aa21.9■■□□□ 1.1
PMP22-206ENST00000494511 TXNDC2Q86VQ3 553 aa21.9■■□□□ 1.1
PMP22-206ENST00000494511 RPRD2Q5VT52 1461 aaKnown RBP21.89■■□□□ 1.09
PMP22-206ENST00000494511 SCAF11Q99590 1463 aaKnown RBP21.89■■□□□ 1.09
PMP22-206ENST00000494511 IQGAP3Q86VI3 1631 aa21.88■■□□□ 1.09
PMP22-206ENST00000494511 SLIT1O75093 1534 aa21.88■■□□□ 1.09
PMP22-206ENST00000494511 ARHGAP23Q9P227 1491 aa21.88■■□□□ 1.09
PMP22-206ENST00000494511 SLC52A1Q9NWF4 448 aa21.87■■□□□ 1.09
PMP22-206ENST00000494511 EID1Q9Y6B2 187 aa21.87■■□□□ 1.09
PMP22-206ENST00000494511 E9PCH4 1651 aa21.87■■□□□ 1.09
PMP22-206ENST00000494511 TMEM2Q9UHN6 1383 aa21.86■■□□□ 1.09
PMP22-206ENST00000494511 MED1Q15648 1581 aaPredicted RBP21.85■■□□□ 1.09
PMP22-206ENST00000494511 KDM5AP29375 1690 aaKnown RBP21.84■■□□□ 1.09
PMP22-206ENST00000494511 ADGRB3O60242 1522 aa21.84■■□□□ 1.09
PMP22-206ENST00000494511 NAIPQ13075 1403 aa21.82■■□□□ 1.08
PMP22-206ENST00000494511 MYO5BQ9ULV0 1848 aa21.82■■□□□ 1.08
PMP22-206ENST00000494511 TOM1O60784 492 aa21.81■■□□□ 1.08
PMP22-206ENST00000494511 CHGAP10645 457 aaKnown RBP21.81■■□□□ 1.08
PMP22-206ENST00000494511 HSPA1LP34931 641 aa21.8■■□□□ 1.08
PMP22-206ENST00000494511 ALKQ9UM73 1620 aa21.8■■□□□ 1.08
PMP22-206ENST00000494511 SCAF1Q9H7N4 1312 aaKnown RBP21.8■■□□□ 1.08
PMP22-206ENST00000494511 STRCP1A6NGW2 1772 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms