RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SIN3AQ96ST3 1273 aa9.91□□□□□ -0.82
MSH5-217ENST00000494458 KDM5CP41229 1560 aa9.91□□□□□ -0.82
MSH5-217ENST00000494458 CFAP74Q9C0B2 1584 aa9.91□□□□□ -0.82
MSH5-217ENST00000494458 INO80Q9ULG1 1556 aaPredicted RBP9.91□□□□□ -0.82
MSH5-217ENST00000494458 ZFYVE16Q7Z3T8 1539 aa9.91□□□□□ -0.82
MSH5-217ENST00000494458 MLH3Q9UHC1 1453 aa9.91□□□□□ -0.82
MSH5-217ENST00000494458 SPAG9O60271 1321 aaKnown RBP9.9□□□□□ -0.82
MSH5-217ENST00000494458 ZNF518AQ6AHZ1 1483 aa9.9□□□□□ -0.83
MSH5-217ENST00000494458 UNC13BO14795 1591 aa9.89□□□□□ -0.83
MSH5-217ENST00000494458 ABCB7O75027 752 aa9.89□□□□□ -0.83
MSH5-217ENST00000494458 TRHP20396 242 aaPredicted RBP9.89□□□□□ -0.83
MSH5-217ENST00000494458 TRIM52Q96A61 297 aa9.89□□□□□ -0.83
MSH5-217ENST00000494458 POGZQ7Z3K3 1410 aa9.89□□□□□ -0.83
MSH5-217ENST00000494458 DHX29Q7Z478 1369 aaKnown RBP9.88□□□□□ -0.83
MSH5-217ENST00000494458 DIP2BQ9P265 1576 aa9.88□□□□□ -0.83
MSH5-217ENST00000494458 RPRD2Q5VT52 1461 aaKnown RBP9.88□□□□□ -0.83
MSH5-217ENST00000494458 SLC4A1APQ9BWU0 796 aaKnown RBP9.88□□□□□ -0.83
MSH5-217ENST00000494458 NUP155O75694 1391 aa9.88□□□□□ -0.83
MSH5-217ENST00000494458 ATP7AQ04656 1500 aa9.87□□□□□ -0.83
MSH5-217ENST00000494458 ATP10AO60312 1499 aa9.87□□□□□ -0.83
MSH5-217ENST00000494458 SLC4A2P04920 1241 aa9.87□□□□□ -0.83
MSH5-217ENST00000494458 VWDEQ8N2E2 1590 aa9.86□□□□□ -0.83
MSH5-217ENST00000494458 ZNF219Q9P2Y4 722 aaPredicted RBP9.86□□□□□ -0.83
MSH5-217ENST00000494458 FAM135AQ9P2D6 1515 aa9.86□□□□□ -0.83
MSH5-217ENST00000494458 KIDINS220Q9ULH0 1771 aa9.86□□□□□ -0.83
MSH5-217ENST00000494458 IQGAP3Q86VI3 1631 aa9.85□□□□□ -0.83
MSH5-217ENST00000494458 PKD2Q13563 968 aa9.85□□□□□ -0.83
MSH5-217ENST00000494458 DEPDC5O75140 1603 aa9.85□□□□□ -0.83
MSH5-217ENST00000494458 ZNF316A6NFI3 1004 aaPredicted RBP9.84□□□□□ -0.83
MSH5-217ENST00000494458 EIF2AK4Q9P2K8 1649 aaKnown RBP9.84□□□□□ -0.83
MSH5-217ENST00000494458 BCORL1Q5H9F3 1711 aa9.84□□□□□ -0.83
MSH5-217ENST00000494458 PPRC1Q5VV67 1664 aaKnown RBP9.83□□□□□ -0.84
MSH5-217ENST00000494458 FAM69CQ0P6D2 419 aa9.83□□□□□ -0.84
MSH5-217ENST00000494458 NEUROD1Q13562 356 aa9.83□□□□□ -0.84
MSH5-217ENST00000494458 PLA2R1Q13018 1463 aa9.83□□□□□ -0.84
MSH5-217ENST00000494458 TEX14Q8IWB6 1497 aa9.82□□□□□ -0.84
MSH5-217ENST00000494458 RICTORQ6R327 1708 aa9.82□□□□□ -0.84
MSH5-217ENST00000494458 ZMYM4Q5VZL5 1548 aa9.82□□□□□ -0.84
MSH5-217ENST00000494458 FRMPD1Q5SYB0 1578 aa9.81□□□□□ -0.84
MSH5-217ENST00000494458 LMTK2Q8IWU2 1503 aa9.81□□□□□ -0.84
MSH5-217ENST00000494458 PTPRTO14522 1441 aa9.81□□□□□ -0.84
MSH5-217ENST00000494458 HECW2Q9P2P5 1572 aa9.8□□□□□ -0.84
MSH5-217ENST00000494458 A2MP01023 1474 aa9.8□□□□□ -0.84
MSH5-217ENST00000494458 TONSLQ96HA7 1378 aa9.8□□□□□ -0.84
MSH5-217ENST00000494458 L3MBTL2Q969R5 705 aa9.8□□□□□ -0.84
MSH5-217ENST00000494458 MROH1Q8NDA8 1641 aa9.8□□□□□ -0.84
MSH5-217ENST00000494458 PRDM15P57071 1507 aaPredicted RBP9.8□□□□□ -0.84
MSH5-217ENST00000494458 RNF17Q9BXT8 1623 aaKnown RBP9.79□□□□□ -0.84
MSH5-217ENST00000494458 CHRDL2Q6WN34 429 aa9.79□□□□□ -0.84
MSH5-217ENST00000494458 KIF13AQ9H1H9 1805 aa9.78□□□□□ -0.84
MSH5-217ENST00000494458 RAPGEF3O95398 923 aa9.78□□□□□ -0.84
MSH5-217ENST00000494458 REREQ9P2R6 1566 aa9.77□□□□□ -0.85
MSH5-217ENST00000494458 UHRF1BP1Q6BDS2 1440 aa9.77□□□□□ -0.85
MSH5-217ENST00000494458 RBM42Q9BTD8 480 aaKnown RBP9.77□□□□□ -0.85
MSH5-217ENST00000494458 ABCA6Q8N139 1617 aa9.77□□□□□ -0.85
MSH5-217ENST00000494458 DIP2CQ9Y2E4 1556 aa9.76□□□□□ -0.85
MSH5-217ENST00000494458 COL17A1Q9UMD9 1497 aaPredicted RBP9.76□□□□□ -0.85
MSH5-217ENST00000494458 NEURL4Q96JN8 1562 aa9.75□□□□□ -0.85
MSH5-217ENST00000494458 TET3O43151 1660 aa9.75□□□□□ -0.85
MSH5-217ENST00000494458 KIF3BO15066 747 aa9.75□□□□□ -0.85
MSH5-217ENST00000494458 DNAJC5Q9H3Z4 198 aa9.75□□□□□ -0.85
MSH5-217ENST00000494458 AGLP35573 1532 aa9.74□□□□□ -0.85
MSH5-217ENST00000494458 NBPF8Q3BBV2 869 aa9.74□□□□□ -0.85
MSH5-217ENST00000494458 STAC3Q96MF2 364 aa9.74□□□□□ -0.85
MSH5-217ENST00000494458 KANK1Q14678 1352 aa9.74□□□□□ -0.85
MSH5-217ENST00000494458 SPATA31E1Q6ZUB1 1445 aa9.73□□□□□ -0.85
MSH5-217ENST00000494458 YEATS2Q9ULM3 1422 aa9.73□□□□□ -0.85
MSH5-217ENST00000494458 E9PCH4 1651 aa9.73□□□□□ -0.85
MSH5-217ENST00000494458 ARHGAP31Q2M1Z3 1444 aa9.73□□□□□ -0.85
MSH5-217ENST00000494458 TRPM2O94759 1503 aa9.72□□□□□ -0.85
MSH5-217ENST00000494458 CCDC144AA2RUR9 1427 aa9.72□□□□□ -0.85
MSH5-217ENST00000494458 EFCAB6Q5THR3 1501 aa9.72□□□□□ -0.85
MSH5-217ENST00000494458 DIEXFQ68CQ4 756 aaKnown RBP9.7□□□□□ -0.86
MSH5-217ENST00000494458 SP7Q8TDD2 431 aaPredicted RBP9.7□□□□□ -0.86
MSH5-217ENST00000494458 ABCC3O15438 1527 aa9.7□□□□□ -0.86
MSH5-217ENST00000494458 NOS1P29475 1434 aa9.69□□□□□ -0.86
MSH5-217ENST00000494458 NPATQ14207 1427 aa9.68□□□□□ -0.86
MSH5-217ENST00000494458 RALGAPBQ86X10 1494 aa9.67□□□□□ -0.86
MSH5-217ENST00000494458 CNTLNQ9NXG0 1405 aa9.67□□□□□ -0.86
MSH5-217ENST00000494458 GPRASP1Q5JY77 1395 aa9.67□□□□□ -0.86
MSH5-217ENST00000494458 MYT1LQ9UL68 1186 aa9.67□□□□□ -0.86
MSH5-217ENST00000494458 SPHKAPQ2M3C7 1700 aa9.67□□□□□ -0.86
MSH5-217ENST00000494458 PRAG1Q86YV5 1406 aa9.66□□□□□ -0.86
MSH5-217ENST00000494458 TSPOAP1O95153 1857 aa9.66□□□□□ -0.86
MSH5-217ENST00000494458 ZC3H13Q5T200 1668 aaKnown RBP9.66□□□□□ -0.86
MSH5-217ENST00000494458 ARHGEF40Q8TER5 1519 aa9.66□□□□□ -0.86
MSH5-217ENST00000494458 CLTCL1P53675 1640 aa9.65□□□□□ -0.86
MSH5-217ENST00000494458 WASHC2CQ9Y4E1 1318 aa9.64□□□□□ -0.87
MSH5-217ENST00000494458 EIF4G2P78344 907 aaKnown RBP eCLIP9.64□□□□□ -0.87
MSH5-217ENST00000494458 GGT6Q6P531 493 aa9.64□□□□□ -0.87
MSH5-217ENST00000494458 DCAF11Q8TEB1 546 aa9.64□□□□□ -0.87
MSH5-217ENST00000494458 CEP152O94986 1710 aa9.63□□□□□ -0.87
MSH5-217ENST00000494458 HSPA5P11021 654 aaKnown RBP9.63□□□□□ -0.87
MSH5-217ENST00000494458 SAMD1Q6SPF0 538 aaPredicted RBP9.63□□□□□ -0.87
MSH5-217ENST00000494458 NRXN1Q9ULB1 1477 aa9.63□□□□□ -0.87
MSH5-217ENST00000494458 PIK3C2BO00750 1634 aa9.63□□□□□ -0.87
MSH5-217ENST00000494458 CAMSAP1Q5T5Y3 1602 aa9.63□□□□□ -0.87
MSH5-217ENST00000494458 SIGLEC1Q9BZZ2 1709 aa9.62□□□□□ -0.87
MSH5-217ENST00000494458 ARID4BQ4LE39 1312 aaPredicted RBP9.61□□□□□ -0.87
MSH5-217ENST00000494458 RPGRIP1LQ68CZ1 1315 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms