RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 SYCP2Q9BX26 1530 aa11.42□□□□□ -0.58
FN1-225ENST00000494446 ADGBQ8N7X0 1667 aa11.42□□□□□ -0.58
FN1-225ENST00000494446 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.41□□□□□ -0.58
FN1-225ENST00000494446 LRRC7Q96NW7 1537 aa11.41□□□□□ -0.58
FN1-225ENST00000494446 HNRNPMP52272 730 aaKnown RBP eCLIP11.41□□□□□ -0.58
FN1-225ENST00000494446 XIRP1Q702N8 1843 aaKnown RBP11.41□□□□□ -0.58
FN1-225ENST00000494446 DEPDC5O75140 1603 aa11.41□□□□□ -0.58
FN1-225ENST00000494446 NPHP4O75161 1426 aaPredicted RBP11.41□□□□□ -0.58
FN1-225ENST00000494446 SYNMO15061 1565 aa11.41□□□□□ -0.58
FN1-225ENST00000494446 INO80Q9ULG1 1556 aaPredicted RBP11.41□□□□□ -0.58
FN1-225ENST00000494446 FBXO31Q5XUX0 539 aaPredicted RBP11.4□□□□□ -0.58
FN1-225ENST00000494446 TNRQ92752 1358 aa11.4□□□□□ -0.59
FN1-225ENST00000494446 THEMISQ8N1K5 641 aaPredicted RBP11.39□□□□□ -0.59
FN1-225ENST00000494446 EHMT2Q96KQ7 1210 aa11.38□□□□□ -0.59
FN1-225ENST00000494446 MED14O60244 1454 aa11.38□□□□□ -0.59
FN1-225ENST00000494446 ARHGAP35Q9NRY4 1499 aa11.37□□□□□ -0.59
FN1-225ENST00000494446 CFAP65Q6ZU64 1925 aaKnown RBP11.37□□□□□ -0.59
FN1-225ENST00000494446 UGGT1Q9NYU2 1555 aa11.37□□□□□ -0.59
FN1-225ENST00000494446 EEA1Q15075 1411 aa11.36□□□□□ -0.59
FN1-225ENST00000494446 FAM135AQ9P2D6 1515 aa11.35□□□□□ -0.59
FN1-225ENST00000494446 UBTFP17480 764 aaKnown RBP11.34□□□□□ -0.59
FN1-225ENST00000494446 ZC3H13Q5T200 1668 aaKnown RBP11.33□□□□□ -0.6
FN1-225ENST00000494446 PZPP20742 1482 aa11.33□□□□□ -0.6
FN1-225ENST00000494446 UPF1Q92900 1129 aaKnown RBP eCLIP11.33□□□□□ -0.67e-14■□□□□ 8.2
FN1-225ENST00000494446 ROBO1Q9Y6N7 1651 aa11.32□□□□□ -0.6
FN1-225ENST00000494446 CCDC18Q5T9S5 1454 aa11.32□□□□□ -0.6
FN1-225ENST00000494446 NLRP1Q9C000 1473 aa11.32□□□□□ -0.6
FN1-225ENST00000494446 GPATCH8Q9UKJ3 1502 aaKnown RBP11.31□□□□□ -0.6
FN1-225ENST00000494446 MIA2Q96PC5 1412 aa11.31□□□□□ -0.6
FN1-225ENST00000494446 PLEKHH2Q8IVE3 1493 aa11.31□□□□□ -0.6
FN1-225ENST00000494446 KDM5DQ9BY66 1539 aa11.3□□□□□ -0.6
FN1-225ENST00000494446 KIAA1107Q9UPP5 1409 aa11.3□□□□□ -0.6
FN1-225ENST00000494446 KIF3BO15066 747 aa11.3□□□□□ -0.6
FN1-225ENST00000494446 PHLPP1O60346 1717 aa11.29□□□□□ -0.6
FN1-225ENST00000494446 FAM135BQ49AJ0 1406 aa11.29□□□□□ -0.6
FN1-225ENST00000494446 CFDP1Q9UEE9 299 aaPredicted RBP11.29□□□□□ -0.6
FN1-225ENST00000494446 WASHC2CQ9Y4E1 1318 aa11.29□□□□□ -0.6
FN1-225ENST00000494446 TRIM52Q96A61 297 aa11.28□□□□□ -0.6
FN1-225ENST00000494446 UBR1Q8IWV7 1749 aa11.27□□□□□ -0.61
FN1-225ENST00000494446 DHX29Q7Z478 1369 aaKnown RBP11.27□□□□□ -0.61
FN1-225ENST00000494446 CASKIN1Q8WXD9 1431 aa11.26□□□□□ -0.61
FN1-225ENST00000494446 SRCAPQ6ZRS2 3230 aa11.25□□□□□ -0.61
FN1-225ENST00000494446 CACNB1Q02641 598 aaPredicted RBP11.25□□□□□ -0.61
FN1-225ENST00000494446 CCNB3Q8WWL7 1395 aa11.25□□□□□ -0.61
FN1-225ENST00000494446 ZNF644Q9H582 1327 aaPredicted RBP11.23□□□□□ -0.61
FN1-225ENST00000494446 SCAF11Q99590 1463 aaKnown RBP11.23□□□□□ -0.61
FN1-225ENST00000494446 RTEL1-TNFRSF6BF6WH68 1400 aa11.22□□□□□ -0.61
FN1-225ENST00000494446 MAPK8IP2Q13387 824 aaPredicted RBP11.22□□□□□ -0.61
FN1-225ENST00000494446 MEX3CQ5U5Q3 659 aaKnown RBP11.22□□□□□ -0.61
FN1-225ENST00000494446 TMEM94Q12767 1356 aa11.21□□□□□ -0.61
FN1-225ENST00000494446 JCADQ9P266 1359 aa11.21□□□□□ -0.61
FN1-225ENST00000494446 LTKP29376 864 aa11.21□□□□□ -0.61
FN1-225ENST00000494446 ZNF772Q68DY9 489 aaPredicted RBP11.21□□□□□ -0.61
FN1-225ENST00000494446 TXNDC2Q86VQ3 553 aa11.21□□□□□ -0.61
FN1-225ENST00000494446 LRRC9Q6ZRR7 1453 aa11.2□□□□□ -0.62
FN1-225ENST00000494446 RBM33Q96EV2 1170 aaKnown RBP11.2□□□□□ -0.62
FN1-225ENST00000494446 CEP152O94986 1710 aa11.2□□□□□ -0.62
FN1-225ENST00000494446 FYCO1Q9BQS8 1478 aa11.19□□□□□ -0.62
FN1-225ENST00000494446 MBD5Q9P267 1494 aa11.19□□□□□ -0.62
FN1-225ENST00000494446 RXRBP28702 533 aa11.19□□□□□ -0.62
FN1-225ENST00000494446 PROSER2Q86WR7 435 aaPredicted RBP11.19□□□□□ -0.62
FN1-225ENST00000494446 ERVK-7P63135 1459 aa11.19□□□□□ -0.62
FN1-225ENST00000494446 LRP6O75581 1613 aa11.18□□□□□ -0.62
FN1-225ENST00000494446 EID1Q9Y6B2 187 aa11.18□□□□□ -0.62
FN1-225ENST00000494446 MAP3K1Q13233 1512 aa11.18□□□□□ -0.62
FN1-225ENST00000494446 COL16A1Q07092 1604 aaPredicted RBP11.17□□□□□ -0.62
FN1-225ENST00000494446 TIAM1Q13009 1591 aa11.17□□□□□ -0.62
FN1-225ENST00000494446 SLIT1O75093 1534 aa11.17□□□□□ -0.62
FN1-225ENST00000494446 NCOA2Q15596 1464 aa11.17□□□□□ -0.62
FN1-225ENST00000494446 ABCC3O15438 1527 aa11.16□□□□□ -0.62
FN1-225ENST00000494446 SLAIN2Q9P270 581 aa11.16□□□□□ -0.62
FN1-225ENST00000494446 ARHGAP23Q9P227 1491 aa11.16□□□□□ -0.62
FN1-225ENST00000494446 SHPRHQ149N8 1683 aa11.15□□□□□ -0.62
FN1-225ENST00000494446 MTUS2Q5JR59 1369 aa11.15□□□□□ -0.63
FN1-225ENST00000494446 SPATA31A6Q5VVP1 1343 aa11.14□□□□□ -0.63
FN1-225ENST00000494446 CCDC141Q6ZP82 1450 aa11.14□□□□□ -0.63
FN1-225ENST00000494446 PIK3C2BO00750 1634 aa11.14□□□□□ -0.63
FN1-225ENST00000494446 KCNA6P17658 529 aa11.14□□□□□ -0.63
FN1-225ENST00000494446 MSH6P52701 1360 aa11.14□□□□□ -0.63
FN1-225ENST00000494446 PRDM15P57071 1507 aaPredicted RBP11.13□□□□□ -0.63
FN1-225ENST00000494446 CDK12Q9NYV4 1490 aaPredicted RBP11.12□□□□□ -0.63
FN1-225ENST00000494446 SLC26A8Q96RN1 970 aa11.12□□□□□ -0.63
FN1-225ENST00000494446 KDM5AP29375 1690 aaKnown RBP11.11□□□□□ -0.63
FN1-225ENST00000494446 NUTM2BA6NNL0 878 aaPredicted RBP11.11□□□□□ -0.63
FN1-225ENST00000494446 NUTM2EB1AL46 878 aaPredicted RBP11.11□□□□□ -0.63
FN1-225ENST00000494446 NUTM2AQ8IVF1 878 aaPredicted RBP11.11□□□□□ -0.63
FN1-225ENST00000494446 STAG3Q9UJ98 1225 aa11.11□□□□□ -0.63
FN1-225ENST00000494446 FGD6Q6ZV73 1430 aa11.1□□□□□ -0.63
FN1-225ENST00000494446 CHD2O14647 1828 aaKnown RBP11.1□□□□□ -0.63
FN1-225ENST00000494446 NUTM2DQ5VT03 806 aaPredicted RBP11.1□□□□□ -0.63
FN1-225ENST00000494446 CAMSAP2Q08AD1 1489 aa11.1□□□□□ -0.63
FN1-225ENST00000494446 MROH1Q8NDA8 1641 aa11.09□□□□□ -0.63
FN1-225ENST00000494446 EIF2AK4Q9P2K8 1649 aaKnown RBP11.09□□□□□ -0.63
FN1-225ENST00000494446 TET3O43151 1660 aa11.09□□□□□ -0.63
FN1-225ENST00000494446 NWD1Q149M9 1564 aa11.09□□□□□ -0.63
FN1-225ENST00000494446 NKTRP30414 1462 aaKnown RBP11.09□□□□□ -0.63
FN1-225ENST00000494446 TMEM2Q9UHN6 1383 aa11.09□□□□□ -0.63
FN1-225ENST00000494446 ZRANB1Q9UGI0 708 aa11.09□□□□□ -0.63
FN1-225ENST00000494446 AFF2P51816 1311 aa11.09□□□□□ -0.63
FN1-225ENST00000494446 SETBP1Q9Y6X0 1596 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms