RNA–Protein interactions for RNA: ENST00000494262.5

CDKN2A-206, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-206ENST00000494262 FGD6Q6ZV73 1430 aa34.78■■■■□ 3.16
CDKN2A-206ENST00000494262 NCOA1Q15788 1441 aa34.76■■■■□ 3.16
CDKN2A-206ENST00000494262 ABCC5O15440 1437 aa34.75■■■■□ 3.15
CDKN2A-206ENST00000494262 CAMSAP1Q5T5Y3 1602 aa34.75■■■■□ 3.15
CDKN2A-206ENST00000494262 ZNF142P52746 1687 aaPredicted RBP34.73■■■■□ 3.15
CDKN2A-206ENST00000494262 CROCC2H7BZ55 1655 aa34.73■■■■□ 3.15
CDKN2A-206ENST00000494262 TCOF1Q13428 1488 aaKnown RBP34.72■■■■□ 3.15
CDKN2A-206ENST00000494262 SHANK2Q9UPX8 1470 aa34.72■■■■□ 3.15
CDKN2A-206ENST00000494262 CEP170BQ9Y4F5 1589 aaPredicted RBP34.72■■■■□ 3.15
CDKN2A-206ENST00000494262 RNF17Q9BXT8 1623 aaKnown RBP34.72■■■■□ 3.15
CDKN2A-206ENST00000494262 PTPRTO14522 1441 aa34.72■■■■□ 3.15
CDKN2A-206ENST00000494262 PZPP20742 1482 aa34.71■■■■□ 3.15
CDKN2A-206ENST00000494262 EIF2AK4Q9P2K8 1649 aaKnown RBP34.7■■■■□ 3.15
CDKN2A-206ENST00000494262 DUOX2Q9NRD8 1548 aa34.7■■■■□ 3.14
CDKN2A-206ENST00000494262 FBXO31Q5XUX0 539 aaPredicted RBP34.69■■■■□ 3.14
CDKN2A-206ENST00000494262 CERKQ8TCT0 537 aa34.69■■■■□ 3.14
CDKN2A-206ENST00000494262 DAPK1P53355 1430 aa34.69■■■■□ 3.14
CDKN2A-206ENST00000494262 DNMT1P26358 1616 aaKnown RBP34.67■■■■□ 3.14
CDKN2A-206ENST00000494262 TNRQ92752 1358 aa34.67■■■■□ 3.14
CDKN2A-206ENST00000494262 KIF15Q9NS87 1388 aa34.67■■■■□ 3.14
CDKN2A-206ENST00000494262 RRP7BPQ9NSQ0 103 aa34.65■■■■□ 3.14
CDKN2A-206ENST00000494262 A2ML1A8K2U0 1454 aa34.64■■■■□ 3.14
CDKN2A-206ENST00000494262 NCKAP5LQ9HCH0 1330 aa34.63■■■■□ 3.13
CDKN2A-206ENST00000494262 ABCC3O15438 1527 aa34.63■■■■□ 3.13
CDKN2A-206ENST00000494262 ZC3H13Q5T200 1668 aaKnown RBP34.6■■■■□ 3.13
CDKN2A-206ENST00000494262 PLA2R1Q13018 1463 aa34.6■■■■□ 3.13
CDKN2A-206ENST00000494262 MROH1Q8NDA8 1641 aa34.6■■■■□ 3.13
CDKN2A-206ENST00000494262 ERBINQ96RT1 1412 aa34.58■■■■□ 3.13
CDKN2A-206ENST00000494262 CHIC2Q9UKJ5 165 aa34.58■■■■□ 3.13
CDKN2A-206ENST00000494262 PKD2Q13563 968 aa34.56■■■■□ 3.12
CDKN2A-206ENST00000494262 FAM50AQ14320 339 aaKnown RBP34.55■■■■□ 3.12
CDKN2A-206ENST00000494262 ANKRD30AQ9BXX3 1397 aa34.54■■■■□ 3.12
CDKN2A-206ENST00000494262 CEP152O94986 1710 aa34.52■■■■□ 3.12
CDKN2A-206ENST00000494262 NLRP1Q9C000 1473 aa34.5■■■■□ 3.11
CDKN2A-206ENST00000494262 PRDM15P57071 1507 aaPredicted RBP34.49■■■■□ 3.11
CDKN2A-206ENST00000494262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.47■■■■□ 3.11
CDKN2A-206ENST00000494262 ERVK-7P63135 1459 aa34.46■■■■□ 3.11
CDKN2A-206ENST00000494262 SPATA31D1Q6ZQQ2 1576 aa34.45■■■■□ 3.11
CDKN2A-206ENST00000494262 LTBP4Q8N2S1 1624 aa34.44■■■■□ 3.1
CDKN2A-206ENST00000494262 ADGRL2O95490 1459 aa34.43■■■■□ 3.1
CDKN2A-206ENST00000494262 DEPDC5O75140 1603 aa34.43■■■■□ 3.1
CDKN2A-206ENST00000494262 UGGT1Q9NYU2 1555 aa34.42■■■■□ 3.1
CDKN2A-206ENST00000494262 THEMISQ8N1K5 641 aaPredicted RBP34.41■■■■□ 3.1
CDKN2A-206ENST00000494262 KANK1Q14678 1352 aa34.4■■■■□ 3.1
CDKN2A-206ENST00000494262 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.39■■■■□ 3.1
CDKN2A-206ENST00000494262 CFAP65Q6ZU64 1925 aaKnown RBP34.39■■■■□ 3.1
CDKN2A-206ENST00000494262 ZNF335Q9H4Z2 1342 aaPredicted RBP34.38■■■■□ 3.09
CDKN2A-206ENST00000494262 POLR1AO95602 1720 aaPredicted RBP34.38■■■■□ 3.09
CDKN2A-206ENST00000494262 ARHGAP31Q2M1Z3 1444 aa34.37■■■■□ 3.09
CDKN2A-206ENST00000494262 PPARGC1BQ86YN6 1023 aaKnown RBP34.36■■■■□ 3.09
CDKN2A-206ENST00000494262 ANKLE2Q86XL3 938 aa34.35■■■■□ 3.09
CDKN2A-206ENST00000494262 NEURL4Q96JN8 1562 aa34.34■■■■□ 3.09
CDKN2A-206ENST00000494262 VWDEQ8N2E2 1590 aa34.29■■■■□ 3.08
CDKN2A-206ENST00000494262 LMTK2Q8IWU2 1503 aa34.29■■■■□ 3.08
CDKN2A-206ENST00000494262 ANKRD50Q9ULJ7 1429 aa34.29■■■■□ 3.08
CDKN2A-206ENST00000494262 IQSEC2Q5JU85 1478 aa34.28■■■■□ 3.08
CDKN2A-206ENST00000494262 UBR1Q8IWV7 1749 aa34.23■■■■□ 3.07
CDKN2A-206ENST00000494262 NPHP4O75161 1426 aaPredicted RBP34.22■■■■□ 3.07
CDKN2A-206ENST00000494262 MED14O60244 1454 aa34.21■■■■□ 3.07
CDKN2A-206ENST00000494262 EFCAB6Q5THR3 1501 aa34.19■■■■□ 3.06
CDKN2A-206ENST00000494262 ITGAEP38570 1179 aa34.18■■■■□ 3.06
CDKN2A-206ENST00000494262 ROCK1Q13464 1354 aa34.18■■■■□ 3.06
CDKN2A-206ENST00000494262 IQGAP1P46940 1657 aa34.15■■■■□ 3.06
CDKN2A-206ENST00000494262 PIK3C2BO00750 1634 aa34.14■■■■□ 3.06
CDKN2A-206ENST00000494262 STAG3Q9UJ98 1225 aa34.11■■■■□ 3.05
CDKN2A-206ENST00000494262 SYNMO15061 1565 aa34.11■■■■□ 3.05
CDKN2A-206ENST00000494262 SCAF11Q99590 1463 aaKnown RBP34.1■■■■□ 3.05
CDKN2A-206ENST00000494262 NOS1P29475 1434 aa34.1■■■■□ 3.05
CDKN2A-206ENST00000494262 SLIT1O75093 1534 aa34.09■■■■□ 3.05
CDKN2A-206ENST00000494262 CPS1P31327 1500 aa34.09■■■■□ 3.05
CDKN2A-206ENST00000494262 ARHGAP23Q9P227 1491 aa34.09■■■■□ 3.05
CDKN2A-206ENST00000494262 IDI1Q13907 227 aa34.09■■■■□ 3.05
CDKN2A-206ENST00000494262 UNC13BO14795 1591 aa34.08■■■■□ 3.05
CDKN2A-206ENST00000494262 UBAP1LF5GYI3 381 aa34.07■■■■□ 3.04
CDKN2A-206ENST00000494262 TXNDC2Q86VQ3 553 aa34.07■■■■□ 3.04
CDKN2A-206ENST00000494262 LTKP29376 864 aa34.06■■■■□ 3.04
CDKN2A-206ENST00000494262 RPRD2Q5VT52 1461 aaKnown RBP34.06■■■■□ 3.04
CDKN2A-206ENST00000494262 TET3O43151 1660 aa34.06■■■■□ 3.04
CDKN2A-206ENST00000494262 EID1Q9Y6B2 187 aa34.04■■■■□ 3.04
CDKN2A-206ENST00000494262 TMEM2Q9UHN6 1383 aa34.03■■■■□ 3.04
CDKN2A-206ENST00000494262 KDM5AP29375 1690 aaKnown RBP34.02■■■■□ 3.04
CDKN2A-206ENST00000494262 SLC52A1Q9NWF4 448 aa34.01■■■■□ 3.03
CDKN2A-206ENST00000494262 GCC2Q8IWJ2 1684 aa33.99■■■■□ 3.03
CDKN2A-206ENST00000494262 RRBP1Q9P2E9 1410 aaKnown RBP33.98■■■■□ 3.03
CDKN2A-206ENST00000494262 ADGRB3O60242 1522 aa33.98■■■■□ 3.03
CDKN2A-206ENST00000494262 IQGAP3Q86VI3 1631 aa33.95■■■■□ 3.03
CDKN2A-206ENST00000494262 NUP155O75694 1391 aa33.95■■■■□ 3.02
CDKN2A-206ENST00000494262 STRCP1A6NGW2 1772 aa33.93■■■■□ 3.02
CDKN2A-206ENST00000494262 E9PCH4 1651 aa33.91■■■■□ 3.02
CDKN2A-206ENST00000494262 TOM1O60784 492 aa33.87■■■■□ 3.01
CDKN2A-206ENST00000494262 LRRC7Q96NW7 1537 aa33.86■■■■□ 3.01
CDKN2A-206ENST00000494262 SCAF1Q9H7N4 1312 aaKnown RBP33.84■■■■□ 3.01
CDKN2A-206ENST00000494262 PIP4K2BP78356 416 aa33.83■■■■□ 3.01
CDKN2A-206ENST00000494262 MYO5BQ9ULV0 1848 aa33.81■■■■□ 3
CDKN2A-206ENST00000494262 CHGAP10645 457 aaKnown RBP33.81■■■■□ 3
CDKN2A-206ENST00000494262 TMEM131LA2VDJ0 1609 aa33.81■■■■□ 3
CDKN2A-206ENST00000494262 SLC26A8Q96RN1 970 aa33.79■■■■□ 3
CDKN2A-206ENST00000494262 BCANQ96GW7 911 aa33.78■■■■□ 3
CDKN2A-206ENST00000494262 ZFYVE9O95405 1425 aa33.77■■■■□ 3
CDKN2A-206ENST00000494262 NAIPQ13075 1403 aa33.77■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms