RNA–Protein interactions for RNA: ENST00000494233.5

LPP-219, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5

Gene LPP, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-219ENST00000494233 PHF23Q9BUL5 403 aaPredicted RBP9.45□□□□□ -0.9
LPP-219ENST00000494233 TNRQ92752 1358 aa9.45□□□□□ -0.9
LPP-219ENST00000494233 ZNF142P52746 1687 aaPredicted RBP9.45□□□□□ -0.9
LPP-219ENST00000494233 SHANK2Q9UPX8 1470 aa9.44□□□□□ -0.9
LPP-219ENST00000494233 FAM135AQ9P2D6 1515 aa9.44□□□□□ -0.9
LPP-219ENST00000494233 PLXNC1O60486 1568 aa9.44□□□□□ -0.9
LPP-219ENST00000494233 ADGBQ8N7X0 1667 aa9.43□□□□□ -0.9
LPP-219ENST00000494233 MYO3AQ8NEV4 1616 aa9.43□□□□□ -0.9
LPP-219ENST00000494233 FBXO31Q5XUX0 539 aaPredicted RBP9.43□□□□□ -0.9
LPP-219ENST00000494233 INO80Q9ULG1 1556 aaPredicted RBP9.42□□□□□ -0.9
LPP-219ENST00000494233 MIA2Q96PC5 1412 aa9.42□□□□□ -0.9
LPP-219ENST00000494233 ZNF644Q9H582 1327 aaPredicted RBP9.42□□□□□ -0.9
LPP-219ENST00000494233 DNMT1P26358 1616 aaKnown RBP9.42□□□□□ -0.9
LPP-219ENST00000494233 NLRP1Q9C000 1473 aa9.41□□□□□ -0.9
LPP-219ENST00000494233 MBD5Q9P267 1494 aa9.41□□□□□ -0.9
LPP-219ENST00000494233 PZPP20742 1482 aa9.4□□□□□ -0.9
LPP-219ENST00000494233 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.4□□□□□ -0.9
LPP-219ENST00000494233 MED14O60244 1454 aa9.4□□□□□ -0.91
LPP-219ENST00000494233 NPHP4O75161 1426 aaPredicted RBP9.39□□□□□ -0.91
LPP-219ENST00000494233 CEP162Q5TB80 1403 aa9.39□□□□□ -0.91
LPP-219ENST00000494233 KDM5DQ9BY66 1539 aa9.38□□□□□ -0.91
LPP-219ENST00000494233 UGGT1Q9NYU2 1555 aa9.37□□□□□ -0.91
LPP-219ENST00000494233 CCDC141Q6ZP82 1450 aa9.37□□□□□ -0.91
LPP-219ENST00000494233 EID1Q9Y6B2 187 aa9.37□□□□□ -0.91
LPP-219ENST00000494233 EHBP1L1Q8N3D4 1523 aa9.36□□□□□ -0.91
LPP-219ENST00000494233 MED1Q15648 1581 aaPredicted RBP9.36□□□□□ -0.91
LPP-219ENST00000494233 DEPDC5O75140 1603 aa9.35□□□□□ -0.91
LPP-219ENST00000494233 POLR1AO95602 1720 aaPredicted RBP9.35□□□□□ -0.91
LPP-219ENST00000494233 TIAM1Q13009 1591 aa9.34□□□□□ -0.91
LPP-219ENST00000494233 TXNDC2Q86VQ3 553 aa9.34□□□□□ -0.91
LPP-219ENST00000494233 NEURL4Q96JN8 1562 aa9.33□□□□□ -0.92
LPP-219ENST00000494233 VWDEQ8N2E2 1590 aa9.33□□□□□ -0.92
LPP-219ENST00000494233 STAG3Q9UJ98 1225 aa9.32□□□□□ -0.92
LPP-219ENST00000494233 NCOA2Q15596 1464 aa9.32□□□□□ -0.92
LPP-219ENST00000494233 LRRC7Q96NW7 1537 aa9.31□□□□□ -0.92
LPP-219ENST00000494233 CAMSAP2Q08AD1 1489 aa9.31□□□□□ -0.92
LPP-219ENST00000494233 ARHGEF5Q12774 1597 aa9.31□□□□□ -0.92
LPP-219ENST00000494233 HDGFP51858 240 aaKnown RBP9.3□□□□□ -0.92
LPP-219ENST00000494233 FAM135BQ49AJ0 1406 aa9.3□□□□□ -0.92
LPP-219ENST00000494233 IQGAP1P46940 1657 aa9.29□□□□□ -0.92
LPP-219ENST00000494233 LOC105371045A0A1W2PR82 267 aa9.29□□□□□ -0.92
LPP-219ENST00000494233 KCNA6P17658 529 aa9.29□□□□□ -0.92
LPP-219ENST00000494233 SCAF11Q99590 1463 aaKnown RBP9.28□□□□□ -0.92
LPP-219ENST00000494233 KANK1Q14678 1352 aa9.28□□□□□ -0.92
LPP-219ENST00000494233 LTKP29376 864 aa9.28□□□□□ -0.92
LPP-219ENST00000494233 SENP3Q9H4L4 574 aaPredicted RBP9.28□□□□□ -0.92
LPP-219ENST00000494233 ZC3H13Q5T200 1668 aaKnown RBP9.28□□□□□ -0.92
LPP-219ENST00000494233 ARHGAP31Q2M1Z3 1444 aa9.28□□□□□ -0.92
LPP-219ENST00000494233 SYNMO15061 1565 aa9.28□□□□□ -0.92
LPP-219ENST00000494233 ERVK-7P63135 1459 aa9.28□□□□□ -0.92
LPP-219ENST00000494233 PROSER2Q86WR7 435 aaPredicted RBP9.27□□□□□ -0.93
LPP-219ENST00000494233 MYOM3Q5VTT5 1437 aa9.27□□□□□ -0.93
LPP-219ENST00000494233 RNF17Q9BXT8 1623 aaKnown RBP9.27□□□□□ -0.93
LPP-219ENST00000494233 ABCC3O15438 1527 aa9.26□□□□□ -0.93
LPP-219ENST00000494233 MAST1Q9Y2H9 1570 aa9.26□□□□□ -0.93
LPP-219ENST00000494233 APLP2Q06481 763 aa9.26□□□□□ -0.93
LPP-219ENST00000494233 SLC52A1Q9NWF4 448 aa9.26□□□□□ -0.93
LPP-219ENST00000494233 RGS17Q9UGC6 210 aaPredicted RBP9.26□□□□□ -0.93
LPP-219ENST00000494233 EIF2AK4Q9P2K8 1649 aaKnown RBP9.26□□□□□ -0.93
LPP-219ENST00000494233 SLIT1O75093 1534 aa9.26□□□□□ -0.93
LPP-219ENST00000494233 DUOX2Q9NRD8 1548 aa9.26□□□□□ -0.93
LPP-219ENST00000494233 ARHGAP23Q9P227 1491 aa9.25□□□□□ -0.93
LPP-219ENST00000494233 TMEM2Q9UHN6 1383 aa9.24□□□□□ -0.93
LPP-219ENST00000494233 ALKQ9UM73 1620 aa9.24□□□□□ -0.93
LPP-219ENST00000494233 LRRC9Q6ZRR7 1453 aa9.24□□□□□ -0.93
LPP-219ENST00000494233 BCANQ96GW7 911 aa9.24□□□□□ -0.93
LPP-219ENST00000494233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.24□□□□□ -0.93
LPP-219ENST00000494233 MAP3K1Q13233 1512 aa9.23□□□□□ -0.93
LPP-219ENST00000494233 IDI1Q13907 227 aa9.23□□□□□ -0.93
LPP-219ENST00000494233 RRP7BPQ9NSQ0 103 aa9.23□□□□□ -0.93
LPP-219ENST00000494233 SLAIN2Q9P270 581 aa9.23□□□□□ -0.93
LPP-219ENST00000494233 TMEM94Q12767 1356 aa9.23□□□□□ -0.93
LPP-219ENST00000494233 ERBINQ96RT1 1412 aa9.22□□□□□ -0.93
LPP-219ENST00000494233 MSH6P52701 1360 aa9.22□□□□□ -0.93
LPP-219ENST00000494233 KIF15Q9NS87 1388 aa9.22□□□□□ -0.93
LPP-219ENST00000494233 UBR1Q8IWV7 1749 aa9.22□□□□□ -0.93
LPP-219ENST00000494233 POTEAQ6S8J7 498 aa9.21□□□□□ -0.94
LPP-219ENST00000494233 SLC26A8Q96RN1 970 aa9.21□□□□□ -0.94
LPP-219ENST00000494233 VPS8Q8N3P4 1428 aa9.21□□□□□ -0.94
LPP-219ENST00000494233 STRCP1A6NGW2 1772 aa9.2□□□□□ -0.94
LPP-219ENST00000494233 ZNF772Q68DY9 489 aaPredicted RBP9.2□□□□□ -0.94
LPP-219ENST00000494233 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.2□□□□□ -0.94
LPP-219ENST00000494233 ANKRD30AQ9BXX3 1397 aa9.2□□□□□ -0.94
LPP-219ENST00000494233 JCADQ9P266 1359 aa9.2□□□□□ -0.94
LPP-219ENST00000494233 NCOA3Q9Y6Q9 1424 aa9.2□□□□□ -0.94
LPP-219ENST00000494233 KANK4Q5T7N3 995 aaPredicted RBP9.19□□□□□ -0.94
LPP-219ENST00000494233 TBX22Q9Y458 520 aa9.19□□□□□ -0.94
LPP-219ENST00000494233 SPATA31A6Q5VVP1 1343 aa9.19□□□□□ -0.94
LPP-219ENST00000494233 KDM5AP29375 1690 aaKnown RBP9.19□□□□□ -0.94
LPP-219ENST00000494233 PPP1R15AO75807 674 aaPredicted RBP9.18□□□□□ -0.94
LPP-219ENST00000494233 EFCAB6Q5THR3 1501 aa9.18□□□□□ -0.94
LPP-219ENST00000494233 CFAP65Q6ZU64 1925 aaKnown RBP9.18□□□□□ -0.94
LPP-219ENST00000494233 CADPS2Q86UW7 1296 aa9.18□□□□□ -0.94
LPP-219ENST00000494233 MROH1Q8NDA8 1641 aa9.17□□□□□ -0.94
LPP-219ENST00000494233 NKTRP30414 1462 aaKnown RBP9.17□□□□□ -0.94
LPP-219ENST00000494233 ABCC5O15440 1437 aa9.17□□□□□ -0.94
LPP-219ENST00000494233 MEX3CQ5U5Q3 659 aaKnown RBP9.17□□□□□ -0.94
LPP-219ENST00000494233 C14orf37Q86TY3 774 aa9.17□□□□□ -0.94
LPP-219ENST00000494233 PRDM15P57071 1507 aaPredicted RBP9.16□□□□□ -0.94
LPP-219ENST00000494233 ATF3P18847 181 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms