RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 PTPREP23469 700 aa16.95■□□□□ 0.3
HMGB3P14-201ENST00000494195 POTEGQ6S5H5 508 aa16.94■□□□□ 0.3
HMGB3P14-201ENST00000494195 GPIHBP1Q8IV16 184 aa16.94■□□□□ 0.3
HMGB3P14-201ENST00000494195 PBX2P40425 430 aa16.93■□□□□ 0.3
HMGB3P14-201ENST00000494195 POTEMA6NI47 508 aa16.92■□□□□ 0.3
HMGB3P14-201ENST00000494195 KCNH8Q96L42 1107 aa16.92■□□□□ 0.3
HMGB3P14-201ENST00000494195 CDHR5Q9HBB8 845 aa16.92■□□□□ 0.3
HMGB3P14-201ENST00000494195 KCNK17Q96T54 332 aa16.91■□□□□ 0.3
HMGB3P14-201ENST00000494195 ARHGAP33O14559 1287 aa16.9■□□□□ 0.3
HMGB3P14-201ENST00000494195 POTEEQ6S8J3 1075 aa16.9■□□□□ 0.3
HMGB3P14-201ENST00000494195 PPP1R3GB7ZBB8 358 aa16.87■□□□□ 0.29
HMGB3P14-201ENST00000494195 FCHSD2O94868 740 aa16.87■□□□□ 0.29
HMGB3P14-201ENST00000494195 CERKQ8TCT0 537 aa16.87■□□□□ 0.29
HMGB3P14-201ENST00000494195 PTGDRQ13258 359 aa16.86■□□□□ 0.29
HMGB3P14-201ENST00000494195 GPR37O15354 613 aa16.85■□□□□ 0.29
HMGB3P14-201ENST00000494195 COL9A1P20849 921 aa16.85■□□□□ 0.29
HMGB3P14-201ENST00000494195 PSEN2P49810 448 aa16.85■□□□□ 0.29
HMGB3P14-201ENST00000494195 NPDC1Q9NQX5 325 aaPredicted RBP16.85■□□□□ 0.29
HMGB3P14-201ENST00000494195 AXIN2Q9Y2T1 843 aa16.85■□□□□ 0.29
HMGB3P14-201ENST00000494195 ZC3H15Q8WU90 426 aaKnown RBP16.83■□□□□ 0.28
HMGB3P14-201ENST00000494195 HIC1Q14526 733 aa16.8■□□□□ 0.28
HMGB3P14-201ENST00000494195 DMRTA1Q5VZB9 504 aa16.78■□□□□ 0.28
HMGB3P14-201ENST00000494195 GNPATO15228 680 aa16.76■□□□□ 0.27
HMGB3P14-201ENST00000494195 PRSS12P56730 875 aa16.76■□□□□ 0.27
HMGB3P14-201ENST00000494195 CDAN1Q8IWY9 1227 aa16.76■□□□□ 0.27
HMGB3P14-201ENST00000494195 RBM27Q9P2N5 1060 aaKnown RBP16.76■□□□□ 0.27
HMGB3P14-201ENST00000494195 LSM11P83369 360 aaKnown RBP eCLIP16.75■□□□□ 0.27
HMGB3P14-201ENST00000494195 ZBED2Q9BTP6 218 aa16.75■□□□□ 0.27
HMGB3P14-201ENST00000494195 SLC4A5Q9BY07 1137 aa16.74■□□□□ 0.27
HMGB3P14-201ENST00000494195 ZMYND10O75800 440 aa16.73■□□□□ 0.27
HMGB3P14-201ENST00000494195 TPRNQ4KMQ1 711 aa16.73■□□□□ 0.27
HMGB3P14-201ENST00000494195 CDCA7LQ96GN5 454 aa16.73■□□□□ 0.27
HMGB3P14-201ENST00000494195 KRTAP3-3Q9BYR6 98 aa16.72■□□□□ 0.27
HMGB3P14-201ENST00000494195 KRTAP3-2Q9BYR7 98 aa16.72■□□□□ 0.27
HMGB3P14-201ENST00000494195 PADI6Q6TGC4 694 aa16.71■□□□□ 0.27
HMGB3P14-201ENST00000494195 TRIM6-TRIM34B2RNG4 842 aa16.7■□□□□ 0.26
HMGB3P14-201ENST00000494195 PROX2Q3B8N5 592 aa16.7■□□□□ 0.26
HMGB3P14-201ENST00000494195 BARGINQ6ZT62 677 aa16.7■□□□□ 0.26
HMGB3P14-201ENST00000494195 TK2O00142 265 aa16.69■□□□□ 0.26
HMGB3P14-201ENST00000494195 ONECUT3O60422 494 aaPredicted RBP16.69■□□□□ 0.26
HMGB3P14-201ENST00000494195 TTC13Q8NBP0 860 aa16.69■□□□□ 0.26
HMGB3P14-201ENST00000494195 VPS9D1Q9Y2B5 631 aa16.68■□□□□ 0.26
HMGB3P14-201ENST00000494195 FECHP22830 423 aa16.67■□□□□ 0.26
HMGB3P14-201ENST00000494195 TSKSQ9UJT2 592 aa16.67■□□□□ 0.26
HMGB3P14-201ENST00000494195 ANKRD13DQ6ZTN6 518 aa16.65■□□□□ 0.26
HMGB3P14-201ENST00000494195 FAM198AQ9UFP1 575 aa16.65■□□□□ 0.26
HMGB3P14-201ENST00000494195 ADGRD1Q6QNK2 874 aa16.64■□□□□ 0.25
HMGB3P14-201ENST00000494195 PACS2Q86VP3 889 aa16.64■□□□□ 0.25
HMGB3P14-201ENST00000494195 PCDH10Q9P2E7 1040 aa16.64■□□□□ 0.25
HMGB3P14-201ENST00000494195 MAP2K5Q13163 448 aa16.63■□□□□ 0.25
HMGB3P14-201ENST00000494195 RABGEF1Q9UJ41 708 aa16.63■□□□□ 0.25
HMGB3P14-201ENST00000494195 KRI1Q8N9T8 703 aaKnown RBP16.61■□□□□ 0.25
HMGB3P14-201ENST00000494195 KIAA1468Q9P260 1216 aa16.61■□□□□ 0.25
HMGB3P14-201ENST00000494195 MINK1Q8N4C8 1332 aaPredicted RBP16.61■□□□□ 0.25
HMGB3P14-201ENST00000494195 NBPF26B4DH59 902 aa16.58■□□□□ 0.24
HMGB3P14-201ENST00000494195 IRF6O14896 467 aa16.57■□□□□ 0.24
HMGB3P14-201ENST00000494195 PRKCSHP14314 528 aaPredicted RBP16.57■□□□□ 0.24
HMGB3P14-201ENST00000494195 ADGRG1Q9Y653 693 aa16.57■□□□□ 0.24
HMGB3P14-201ENST00000494195 HRO43593 1189 aa16.55■□□□□ 0.24
HMGB3P14-201ENST00000494195 TATDN2Q93075 761 aa16.55■□□□□ 0.24
HMGB3P14-201ENST00000494195 NBPF3Q9H094 633 aa16.55■□□□□ 0.24
HMGB3P14-201ENST00000494195 BHMG1C9JSJ3 638 aaPredicted RBP16.54■□□□□ 0.24
HMGB3P14-201ENST00000494195 PNMA3Q9UL41 463 aa16.54■□□□□ 0.24
HMGB3P14-201ENST00000494195 OATP04181 439 aa16.53■□□□□ 0.24
HMGB3P14-201ENST00000494195 NUDT18Q6ZVK8 323 aa16.53■□□□□ 0.24
HMGB3P14-201ENST00000494195 CCDC102AQ96A19 550 aa16.53■□□□□ 0.24
HMGB3P14-201ENST00000494195 SLC24A3Q9HC58 644 aa16.53■□□□□ 0.24
HMGB3P14-201ENST00000494195 C3orf80F5H4A9 247 aa16.52■□□□□ 0.24
HMGB3P14-201ENST00000494195 FAM161AQ3B820 660 aa16.52■□□□□ 0.24
HMGB3P14-201ENST00000494195 RBM46Q8TBY0 533 aaKnown RBP16.52■□□□□ 0.24
HMGB3P14-201ENST00000494195 SMAPO00193 183 aa16.49■□□□□ 0.23
HMGB3P14-201ENST00000494195 AK7Q96M32 723 aa16.49■□□□□ 0.23
HMGB3P14-201ENST00000494195 EYA1Q99502 592 aa16.49■□□□□ 0.23
HMGB3P14-201ENST00000494195 METTL3Q86U44 580 aaKnown RBP16.48■□□□□ 0.23
HMGB3P14-201ENST00000494195 LAPTM4BQ86VI4 370 aa16.48■□□□□ 0.23
HMGB3P14-201ENST00000494195 MRPL50Q8N5N7 158 aaKnown RBP16.48■□□□□ 0.23
HMGB3P14-201ENST00000494195 PXYLP1Q8TE99 480 aa16.48■□□□□ 0.23
HMGB3P14-201ENST00000494195 STAC3Q96MF2 364 aa16.48■□□□□ 0.23
HMGB3P14-201ENST00000494195 SEPT9Q9UHD8 586 aaPredicted RBP16.48■□□□□ 0.23
HMGB3P14-201ENST00000494195 FAM98CQ17RN3 349 aaKnown RBP16.45■□□□□ 0.22
HMGB3P14-201ENST00000494195 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.4■□□□□ 0.22
HMGB3P14-201ENST00000494195 RCCD1A6NED2 376 aa16.4■□□□□ 0.22
HMGB3P14-201ENST00000494195 TRIM66O15016 1216 aa16.4■□□□□ 0.22
HMGB3P14-201ENST00000494195 PHOX2BQ99453 314 aa16.4■□□□□ 0.22
HMGB3P14-201ENST00000494195 DNAJB2P25686 324 aa16.39■□□□□ 0.21
HMGB3P14-201ENST00000494195 ZFRQ96KR1 1074 aaKnown RBP16.37■□□□□ 0.21
HMGB3P14-201ENST00000494195 GOLGA8CPA6NN73 597 aa16.36■□□□□ 0.21
HMGB3P14-201ENST00000494195 AMHR2Q16671 573 aa16.35■□□□□ 0.21
HMGB3P14-201ENST00000494195 TMEM134Q9H6X4 195 aa16.34■□□□□ 0.21
HMGB3P14-201ENST00000494195 SPNS2Q8IVW8 549 aa16.33■□□□□ 0.2
HMGB3P14-201ENST00000494195 HDGFP51858 240 aaKnown RBP16.31■□□□□ 0.2
HMGB3P14-201ENST00000494195 NLRP7Q8WX94 980 aa16.31■□□□□ 0.2
HMGB3P14-201ENST00000494195 MDM2Q00987 491 aaPredicted RBP16.3■□□□□ 0.2
HMGB3P14-201ENST00000494195 PDE4DQ08499 809 aa16.3■□□□□ 0.2
HMGB3P14-201ENST00000494195 SAMD7Q7Z3H4 446 aa16.3■□□□□ 0.2
HMGB3P14-201ENST00000494195 ANKK1Q8NFD2 765 aa16.3■□□□□ 0.2
HMGB3P14-201ENST00000494195 MYT1LQ9UL68 1186 aa16.3■□□□□ 0.2
HMGB3P14-201ENST00000494195 SWT1Q5T5J6 900 aaKnown RBP16.29■□□□□ 0.2
HMGB3P14-201ENST00000494195 WNT2BQ93097 391 aa16.29■□□□□ 0.2
HMGB3P14-201ENST00000494195 CLCN1P35523 988 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms