RNA–Protein interactions for RNA: ENST00000494057.5

NICN1-206, Transcript of nicolin 1, humanhuman

TSL 2

Gene NICN1, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1-206ENST00000494057 TNRQ92752 1358 aa24.2■■□□□ 1.46
NICN1-206ENST00000494057 KDM5DQ9BY66 1539 aa24.2■■□□□ 1.46
NICN1-206ENST00000494057 PZPP20742 1482 aa24.19■■□□□ 1.46
NICN1-206ENST00000494057 CPS1P31327 1500 aa24.18■■□□□ 1.46
NICN1-206ENST00000494057 CCDC141Q6ZP82 1450 aa24.18■■□□□ 1.46
NICN1-206ENST00000494057 POLR1AO95602 1720 aaPredicted RBP24.18■■□□□ 1.46
NICN1-206ENST00000494057 KIF3BO15066 747 aa24.17■■□□□ 1.46
NICN1-206ENST00000494057 NEURL4Q96JN8 1562 aa24.16■■□□□ 1.46
NICN1-206ENST00000494057 FBXO31Q5XUX0 539 aaPredicted RBP24.15■■□□□ 1.46
NICN1-206ENST00000494057 SHANK2Q9UPX8 1470 aa24.13■■□□□ 1.45
NICN1-206ENST00000494057 SCAF1Q9H7N4 1312 aaKnown RBP24.13■■□□□ 1.45
NICN1-206ENST00000494057 WASHC2CQ9Y4E1 1318 aa24.13■■□□□ 1.45
NICN1-206ENST00000494057 TOM1O60784 492 aa24.13■■□□□ 1.45
NICN1-206ENST00000494057 RSPH4AQ5TD94 716 aa24.13■■□□□ 1.45
NICN1-206ENST00000494057 CAMSAP2Q08AD1 1489 aa24.13■■□□□ 1.45
NICN1-206ENST00000494057 ANKLE2Q86XL3 938 aa24.11■■□□□ 1.45
NICN1-206ENST00000494057 NLRP1Q9C000 1473 aa24.11■■□□□ 1.45
NICN1-206ENST00000494057 PIP4K2BP78356 416 aa24.1■■□□□ 1.45
NICN1-206ENST00000494057 NCOA2Q15596 1464 aa24.09■■□□□ 1.45
NICN1-206ENST00000494057 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.09■■□□□ 1.45
NICN1-206ENST00000494057 HSPA1LP34931 641 aa24.09■■□□□ 1.45
NICN1-206ENST00000494057 THEMISQ8N1K5 641 aaPredicted RBP24.09■■□□□ 1.45
NICN1-206ENST00000494057 MIA2Q96PC5 1412 aa24.09■■□□□ 1.45
NICN1-206ENST00000494057 UGGT1Q9NYU2 1555 aa24.08■■□□□ 1.44
NICN1-206ENST00000494057 MED1Q15648 1581 aaPredicted RBP24.07■■□□□ 1.44
NICN1-206ENST00000494057 VWDEQ8N2E2 1590 aa24.06■■□□□ 1.44
NICN1-206ENST00000494057 MED14O60244 1454 aa24.06■■□□□ 1.44
NICN1-206ENST00000494057 ARHGEF5Q12774 1597 aa24.05■■□□□ 1.44
NICN1-206ENST00000494057 DEPDC5O75140 1603 aa24.05■■□□□ 1.44
NICN1-206ENST00000494057 NPHP4O75161 1426 aaPredicted RBP24.04■■□□□ 1.44
NICN1-206ENST00000494057 TSPY4P0CV99 314 aa24.03■■□□□ 1.44
NICN1-206ENST00000494057 TSPY10P0CW01 314 aa24.03■■□□□ 1.44
NICN1-206ENST00000494057 RNF17Q9BXT8 1623 aaKnown RBP23.99■■□□□ 1.43
NICN1-206ENST00000494057 IQGAP1P46940 1657 aa23.98■■□□□ 1.43
NICN1-206ENST00000494057 ZC3H13Q5T200 1668 aaKnown RBP23.98■■□□□ 1.43
NICN1-206ENST00000494057 ABCC3O15438 1527 aa23.97■■□□□ 1.43
NICN1-206ENST00000494057 ALKQ9UM73 1620 aa23.95■■□□□ 1.42
NICN1-206ENST00000494057 MAST1Q9Y2H9 1570 aa23.94■■□□□ 1.42
NICN1-206ENST00000494057 ERVK-7P63135 1459 aa23.93■■□□□ 1.42
NICN1-206ENST00000494057 EIF2AK4Q9P2K8 1649 aaKnown RBP23.92■■□□□ 1.42
NICN1-206ENST00000494057 SYNMO15061 1565 aa23.91■■□□□ 1.42
NICN1-206ENST00000494057 PHF23Q9BUL5 403 aaPredicted RBP23.91■■□□□ 1.42
NICN1-206ENST00000494057 LRRC7Q96NW7 1537 aa23.9■■□□□ 1.42
NICN1-206ENST00000494057 LRRC9Q6ZRR7 1453 aa23.89■■□□□ 1.42
NICN1-206ENST00000494057 MROH1Q8NDA8 1641 aa23.87■■□□□ 1.41
NICN1-206ENST00000494057 STRCP1A6NGW2 1772 aa23.86■■□□□ 1.41
NICN1-206ENST00000494057 SCAF11Q99590 1463 aaKnown RBP23.84■■□□□ 1.41
NICN1-206ENST00000494057 UBR1Q8IWV7 1749 aa23.84■■□□□ 1.41
NICN1-206ENST00000494057 VPS8Q8N3P4 1428 aa23.84■■□□□ 1.41
NICN1-206ENST00000494057 DUOX2Q9NRD8 1548 aa23.82■■□□□ 1.4
NICN1-206ENST00000494057 CEP152O94986 1710 aa23.81■■□□□ 1.4
NICN1-206ENST00000494057 MYOM3Q5VTT5 1437 aa23.8■■□□□ 1.4
NICN1-206ENST00000494057 SLIT1O75093 1534 aa23.79■■□□□ 1.4
NICN1-206ENST00000494057 SENP3Q9H4L4 574 aaPredicted RBP23.79■■□□□ 1.4
NICN1-206ENST00000494057 ARHGAP23Q9P227 1491 aa23.79■■□□□ 1.4
NICN1-206ENST00000494057 PRDM15P57071 1507 aaPredicted RBP23.78■■□□□ 1.4
NICN1-206ENST00000494057 ARHGAP31Q2M1Z3 1444 aa23.77■■□□□ 1.4
NICN1-206ENST00000494057 MAP3K1Q13233 1512 aa23.77■■□□□ 1.4
NICN1-206ENST00000494057 LTKP29376 864 aa23.76■■□□□ 1.39
NICN1-206ENST00000494057 TXNDC2Q86VQ3 553 aa23.76■■□□□ 1.39
NICN1-206ENST00000494057 KIF15Q9NS87 1388 aa23.75■■□□□ 1.39
NICN1-206ENST00000494057 ERBINQ96RT1 1412 aa23.75■■□□□ 1.39
NICN1-206ENST00000494057 KANK4Q5T7N3 995 aaPredicted RBP23.74■■□□□ 1.39
NICN1-206ENST00000494057 EID1Q9Y6B2 187 aa23.74■■□□□ 1.39
NICN1-206ENST00000494057 CFAP65Q6ZU64 1925 aaKnown RBP23.71■■□□□ 1.39
NICN1-206ENST00000494057 TMEM2Q9UHN6 1383 aa23.68■■□□□ 1.38
NICN1-206ENST00000494057 CROCC2H7BZ55 1655 aa23.68■■□□□ 1.38
NICN1-206ENST00000494057 PIK3C2BO00750 1634 aa23.68■■□□□ 1.38
NICN1-206ENST00000494057 RRP7BPQ9NSQ0 103 aa23.67■■□□□ 1.38
NICN1-206ENST00000494057 ABCC5O15440 1437 aa23.67■■□□□ 1.38
NICN1-206ENST00000494057 KANK1Q14678 1352 aa23.66■■□□□ 1.38
NICN1-206ENST00000494057 XIRP1Q702N8 1843 aaKnown RBP23.66■■□□□ 1.38
NICN1-206ENST00000494057 STAG3Q9UJ98 1225 aa23.66■■□□□ 1.38
NICN1-206ENST00000494057 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.65■■□□□ 1.38
NICN1-206ENST00000494057 FAM135BQ49AJ0 1406 aa23.65■■□□□ 1.38
NICN1-206ENST00000494057 KDM5AP29375 1690 aaKnown RBP23.64■■□□□ 1.38
NICN1-206ENST00000494057 EFCAB6Q5THR3 1501 aa23.64■■□□□ 1.37
NICN1-206ENST00000494057 RGS17Q9UGC6 210 aaPredicted RBP23.63■■□□□ 1.37
NICN1-206ENST00000494057 PTPN23Q9H3S7 1636 aa23.62■■□□□ 1.37
NICN1-206ENST00000494057 DAPK1P53355 1430 aa23.61■■□□□ 1.37
NICN1-206ENST00000494057 LMTK2Q8IWU2 1503 aa23.61■■□□□ 1.37
NICN1-206ENST00000494057 TMEM94Q12767 1356 aa23.61■■□□□ 1.37
NICN1-206ENST00000494057 LOC105371045A0A1W2PR82 267 aa23.58■■□□□ 1.37
NICN1-206ENST00000494057 KCNA6P17658 529 aa23.58■■□□□ 1.37
NICN1-206ENST00000494057 IDI1Q13907 227 aa23.57■■□□□ 1.36
NICN1-206ENST00000494057 ANKRD30AQ9BXX3 1397 aa23.56■■□□□ 1.36
NICN1-206ENST00000494057 TET3O43151 1660 aa23.56■■□□□ 1.36
NICN1-206ENST00000494057 ROBO1Q9Y6N7 1651 aa23.54■■□□□ 1.36
NICN1-206ENST00000494057 ADGRB3O60242 1522 aa23.54■■□□□ 1.36
NICN1-206ENST00000494057 FGD6Q6ZV73 1430 aa23.54■■□□□ 1.36
NICN1-206ENST00000494057 SLC26A8Q96RN1 970 aa23.54■■□□□ 1.36
NICN1-206ENST00000494057 NKTRP30414 1462 aaKnown RBP23.54■■□□□ 1.36
NICN1-206ENST00000494057 NOS1P29475 1434 aa23.53■■□□□ 1.36
NICN1-206ENST00000494057 APLP2Q06481 763 aa23.53■■□□□ 1.36
NICN1-206ENST00000494057 PROSER2Q86WR7 435 aaPredicted RBP23.53■■□□□ 1.36
NICN1-206ENST00000494057 NWD1Q149M9 1564 aa23.52■■□□□ 1.36
NICN1-206ENST00000494057 SLC52A1Q9NWF4 448 aa23.5■■□□□ 1.35
NICN1-206ENST00000494057 CHIC2Q9UKJ5 165 aa23.5■■□□□ 1.35
NICN1-206ENST00000494057 MSH6P52701 1360 aa23.49■■□□□ 1.35
NICN1-206ENST00000494057 RBM33Q96EV2 1170 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms