RNA–Protein interactions for RNA: ENST00000494018.1

NR1H3-225, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-225ENST00000494018 IQGAP1P46940 1657 aa16.21■□□□□ 0.19
NR1H3-225ENST00000494018 ATP7AQ04656 1500 aa16.21■□□□□ 0.19
NR1H3-225ENST00000494018 TRIM52Q96A61 297 aa16.21■□□□□ 0.19
NR1H3-225ENST00000494018 PLXNC1O60486 1568 aa16.21■□□□□ 0.18
NR1H3-225ENST00000494018 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
NR1H3-225ENST00000494018 THEMISQ8N1K5 641 aaPredicted RBP16.19■□□□□ 0.18
NR1H3-225ENST00000494018 XIRP1Q702N8 1843 aaKnown RBP16.18■□□□□ 0.18
NR1H3-225ENST00000494018 FMN1Q68DA7 1419 aa16.18■□□□□ 0.18
NR1H3-225ENST00000494018 UGGT1Q9NYU2 1555 aa16.16■□□□□ 0.18
NR1H3-225ENST00000494018 MED14O60244 1454 aa16.16■□□□□ 0.18
NR1H3-225ENST00000494018 DEPDC5O75140 1603 aa16.16■□□□□ 0.18
NR1H3-225ENST00000494018 SYNMO15061 1565 aa16.15■□□□□ 0.18
NR1H3-225ENST00000494018 INO80Q9ULG1 1556 aaPredicted RBP16.14■□□□□ 0.17
NR1H3-225ENST00000494018 ARHGAP35Q9NRY4 1499 aa16.14■□□□□ 0.17
NR1H3-225ENST00000494018 FAM135AQ9P2D6 1515 aa16.14■□□□□ 0.17
NR1H3-225ENST00000494018 RBM33Q96EV2 1170 aaKnown RBP16.12■□□□□ 0.17
NR1H3-225ENST00000494018 UBTFP17480 764 aaKnown RBP16.11■□□□□ 0.17
NR1H3-225ENST00000494018 ADGBQ8N7X0 1667 aa16.11■□□□□ 0.17
NR1H3-225ENST00000494018 ROBO1Q9Y6N7 1651 aa16.11■□□□□ 0.17
NR1H3-225ENST00000494018 KIF3BO15066 747 aa16.1■□□□□ 0.17
NR1H3-225ENST00000494018 MIA2Q96PC5 1412 aa16.1■□□□□ 0.17
NR1H3-225ENST00000494018 PZPP20742 1482 aa16.1■□□□□ 0.17
NR1H3-225ENST00000494018 FAM135BQ49AJ0 1406 aa16.09■□□□□ 0.17
NR1H3-225ENST00000494018 ZC3H13Q5T200 1668 aaKnown RBP16.08■□□□□ 0.17
NR1H3-225ENST00000494018 WASHC2CQ9Y4E1 1318 aa16.08■□□□□ 0.16
NR1H3-225ENST00000494018 CFAP65Q6ZU64 1925 aaKnown RBP16.07■□□□□ 0.16
NR1H3-225ENST00000494018 GPATCH8Q9UKJ3 1502 aaKnown RBP16.07■□□□□ 0.16
NR1H3-225ENST00000494018 ZNF644Q9H582 1327 aaPredicted RBP16.06■□□□□ 0.16
NR1H3-225ENST00000494018 CFDP1Q9UEE9 299 aaPredicted RBP16.06■□□□□ 0.16
NR1H3-225ENST00000494018 NLRP1Q9C000 1473 aa16.05■□□□□ 0.16
NR1H3-225ENST00000494018 MEX3CQ5U5Q3 659 aaKnown RBP16.04■□□□□ 0.16
NR1H3-225ENST00000494018 PHLPP1O60346 1717 aa16.04■□□□□ 0.16
NR1H3-225ENST00000494018 KDM5DQ9BY66 1539 aa16.04■□□□□ 0.16
NR1H3-225ENST00000494018 LTKP29376 864 aa16.02■□□□□ 0.16
NR1H3-225ENST00000494018 TMEM94Q12767 1356 aa16.01■□□□□ 0.15
NR1H3-225ENST00000494018 DHX29Q7Z478 1369 aaKnown RBP16.01■□□□□ 0.15
NR1H3-225ENST00000494018 KIAA1107Q9UPP5 1409 aa16.01■□□□□ 0.15
NR1H3-225ENST00000494018 LRP6O75581 1613 aa16.01■□□□□ 0.15
NR1H3-225ENST00000494018 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
NR1H3-225ENST00000494018 EEA1Q15075 1411 aa16■□□□□ 0.15
NR1H3-225ENST00000494018 JCADQ9P266 1359 aa15.99■□□□□ 0.15
NR1H3-225ENST00000494018 RXRBP28702 533 aa15.98■□□□□ 0.15
NR1H3-225ENST00000494018 PROSER2Q86WR7 435 aaPredicted RBP15.98■□□□□ 0.15
NR1H3-225ENST00000494018 CCDC18Q5T9S5 1454 aa15.97■□□□□ 0.15
NR1H3-225ENST00000494018 PLEKHH2Q8IVE3 1493 aa15.97■□□□□ 0.15
NR1H3-225ENST00000494018 SCAF11Q99590 1463 aaKnown RBP15.97■□□□□ 0.15
NR1H3-225ENST00000494018 ZNF772Q68DY9 489 aaPredicted RBP15.97■□□□□ 0.15
NR1H3-225ENST00000494018 CCNB3Q8WWL7 1395 aa15.97■□□□□ 0.15
NR1H3-225ENST00000494018 UBR1Q8IWV7 1749 aa15.96■□□□□ 0.15
NR1H3-225ENST00000494018 CASKIN1Q8WXD9 1431 aa15.94■□□□□ 0.14
NR1H3-225ENST00000494018 NUTM2BA6NNL0 878 aaPredicted RBP15.93■□□□□ 0.14
NR1H3-225ENST00000494018 NUTM2EB1AL46 878 aaPredicted RBP15.93■□□□□ 0.14
NR1H3-225ENST00000494018 NUTM2AQ8IVF1 878 aaPredicted RBP15.93■□□□□ 0.14
NR1H3-225ENST00000494018 MAP3K1Q13233 1512 aa15.93■□□□□ 0.14
NR1H3-225ENST00000494018 SLAIN2Q9P270 581 aa15.92■□□□□ 0.14
NR1H3-225ENST00000494018 NCOA2Q15596 1464 aa15.91■□□□□ 0.14
NR1H3-225ENST00000494018 MBD5Q9P267 1494 aa15.91■□□□□ 0.14
NR1H3-225ENST00000494018 SLC26A8Q96RN1 970 aa15.91■□□□□ 0.14
NR1H3-225ENST00000494018 COL16A1Q07092 1604 aaPredicted RBP15.9■□□□□ 0.14
NR1H3-225ENST00000494018 NUTM2DQ5VT03 806 aaPredicted RBP15.9■□□□□ 0.14
NR1H3-225ENST00000494018 ERVK-7P63135 1459 aa15.9■□□□□ 0.14
NR1H3-225ENST00000494018 SETBP1Q9Y6X0 1596 aa15.89■□□□□ 0.13
NR1H3-225ENST00000494018 RTEL1-TNFRSF6BF6WH68 1400 aa15.88■□□□□ 0.13
NR1H3-225ENST00000494018 EID1Q9Y6B2 187 aa15.88■□□□□ 0.13
NR1H3-225ENST00000494018 LRRC9Q6ZRR7 1453 aa15.88■□□□□ 0.13
NR1H3-225ENST00000494018 KCNA6P17658 529 aa15.87■□□□□ 0.13
NR1H3-225ENST00000494018 CEP152O94986 1710 aa15.86■□□□□ 0.13
NR1H3-225ENST00000494018 AFF2P51816 1311 aa15.86■□□□□ 0.13
NR1H3-225ENST00000494018 SPATA31A6Q5VVP1 1343 aa15.86■□□□□ 0.13
NR1H3-225ENST00000494018 MSH6P52701 1360 aa15.86■□□□□ 0.13
NR1H3-225ENST00000494018 ARHGAP23Q9P227 1491 aa15.85■□□□□ 0.13
NR1H3-225ENST00000494018 ABCC3O15438 1527 aa15.85■□□□□ 0.13
NR1H3-225ENST00000494018 ZRANB1Q9UGI0 708 aa15.85■□□□□ 0.13
NR1H3-225ENST00000494018 RGS12O14924 1447 aa15.85■□□□□ 0.13
NR1H3-225ENST00000494018 SLIT1O75093 1534 aa15.84■□□□□ 0.13
NR1H3-225ENST00000494018 TIAM1Q13009 1591 aa15.83■□□□□ 0.13
NR1H3-225ENST00000494018 BCANQ96GW7 911 aa15.82■□□□□ 0.12
NR1H3-225ENST00000494018 STAG3Q9UJ98 1225 aa15.82■□□□□ 0.12
NR1H3-225ENST00000494018 CDK12Q9NYV4 1490 aaPredicted RBP15.82■□□□□ 0.12
NR1H3-225ENST00000494018 PRDM15P57071 1507 aaPredicted RBP15.82■□□□□ 0.12
NR1H3-225ENST00000494018 MTUS2Q5JR59 1369 aa15.81■□□□□ 0.12
NR1H3-225ENST00000494018 FYCO1Q9BQS8 1478 aa15.81■□□□□ 0.12
NR1H3-225ENST00000494018 PIK3C2BO00750 1634 aa15.8■□□□□ 0.12
NR1H3-225ENST00000494018 QTRT2Q9H974 415 aaKnown RBP15.8■□□□□ 0.12
NR1H3-225ENST00000494018 SHPRHQ149N8 1683 aa15.79■□□□□ 0.12
NR1H3-225ENST00000494018 CCDC141Q6ZP82 1450 aa15.79■□□□□ 0.12
NR1H3-225ENST00000494018 TMEM2Q9UHN6 1383 aa15.78■□□□□ 0.12
NR1H3-225ENST00000494018 C8orf37Q96NL8 207 aa15.78■□□□□ 0.12
NR1H3-225ENST00000494018 FGD6Q6ZV73 1430 aa15.77■□□□□ 0.12
NR1H3-225ENST00000494018 C14orf37Q86TY3 774 aa15.77■□□□□ 0.12
NR1H3-225ENST00000494018 RBM6P78332 1123 aaKnown RBP15.76■□□□□ 0.11
NR1H3-225ENST00000494018 TET3O43151 1660 aa15.76■□□□□ 0.11
NR1H3-225ENST00000494018 KDM5AP29375 1690 aaKnown RBP15.76■□□□□ 0.11
NR1H3-225ENST00000494018 CAMSAP2Q08AD1 1489 aa15.74■□□□□ 0.11
NR1H3-225ENST00000494018 MROH1Q8NDA8 1641 aa15.74■□□□□ 0.11
NR1H3-225ENST00000494018 NKTRP30414 1462 aaKnown RBP15.73■□□□□ 0.11
NR1H3-225ENST00000494018 NWD1Q149M9 1564 aa15.73■□□□□ 0.11
NR1H3-225ENST00000494018 TSPY4P0CV99 314 aa15.72■□□□□ 0.11
NR1H3-225ENST00000494018 TSPY10P0CW01 314 aa15.72■□□□□ 0.11
NR1H3-225ENST00000494018 EP400Q96L91 3159 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms