RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 DUOX2Q9NRD8 1548 aa9.66□□□□□ -0.86
FNDC3B-212ENST00000494000 KIF15Q9NS87 1388 aa9.66□□□□□ -0.86
FNDC3B-212ENST00000494000 KDM5DQ9BY66 1539 aa9.66□□□□□ -0.86
FNDC3B-212ENST00000494000 CYB5RLQ6IPT4 315 aa9.66□□□□□ -0.86
FNDC3B-212ENST00000494000 ERBINQ96RT1 1412 aa9.65□□□□□ -0.86
FNDC3B-212ENST00000494000 TRIM52Q96A61 297 aa9.65□□□□□ -0.87
FNDC3B-212ENST00000494000 ADGRL1O94910 1474 aa9.64□□□□□ -0.87
FNDC3B-212ENST00000494000 MAP3K4Q9Y6R4 1608 aa9.64□□□□□ -0.87
FNDC3B-212ENST00000494000 KDM6BO15054 1643 aa9.64□□□□□ -0.87
FNDC3B-212ENST00000494000 ARHGEF12Q9NZN5 1544 aa9.64□□□□□ -0.87
FNDC3B-212ENST00000494000 ZNF518AQ6AHZ1 1483 aa9.63□□□□□ -0.87
FNDC3B-212ENST00000494000 SPAG9O60271 1321 aaKnown RBP9.63□□□□□ -0.87
FNDC3B-212ENST00000494000 MPHOSPH9Q99550 1183 aa9.63□□□□□ -0.87
FNDC3B-212ENST00000494000 INO80Q9ULG1 1556 aaPredicted RBP9.62□□□□□ -0.87
FNDC3B-212ENST00000494000 UNC13BO14795 1591 aa9.62□□□□□ -0.87
FNDC3B-212ENST00000494000 SCAPERQ9BY12 1400 aa9.62□□□□□ -0.87
FNDC3B-212ENST00000494000 TRAPPC8Q9Y2L5 1435 aa9.61□□□□□ -0.87
FNDC3B-212ENST00000494000 ZFYVE16Q7Z3T8 1539 aa9.61□□□□□ -0.87
FNDC3B-212ENST00000494000 ATP7AQ04656 1500 aa9.61□□□□□ -0.87
FNDC3B-212ENST00000494000 TRHP20396 242 aaPredicted RBP9.61□□□□□ -0.87
FNDC3B-212ENST00000494000 FKBP8Q14318 412 aa9.61□□□□□ -0.87
FNDC3B-212ENST00000494000 BCL11BQ9C0K0 894 aaPredicted RBP9.61□□□□□ -0.87
FNDC3B-212ENST00000494000 TEX14Q8IWB6 1497 aa9.61□□□□□ -0.87
FNDC3B-212ENST00000494000 EIF2AK4Q9P2K8 1649 aaKnown RBP9.6□□□□□ -0.87
FNDC3B-212ENST00000494000 FBXO3Q9UK99 471 aa9.6□□□□□ -0.87
FNDC3B-212ENST00000494000 DIP2BQ9P265 1576 aa9.6□□□□□ -0.87
FNDC3B-212ENST00000494000 KDM5CP41229 1560 aa9.6□□□□□ -0.87
FNDC3B-212ENST00000494000 PZPP20742 1482 aa9.59□□□□□ -0.87
FNDC3B-212ENST00000494000 MLH3Q9UHC1 1453 aa9.59□□□□□ -0.87
FNDC3B-212ENST00000494000 POGZQ7Z3K3 1410 aa9.59□□□□□ -0.87
FNDC3B-212ENST00000494000 MAGI2Q86UL8 1455 aa9.59□□□□□ -0.87
FNDC3B-212ENST00000494000 DENND4BO75064 1496 aaPredicted RBP9.58□□□□□ -0.88
FNDC3B-212ENST00000494000 NUP155O75694 1391 aa9.58□□□□□ -0.88
FNDC3B-212ENST00000494000 TONSLQ96HA7 1378 aa9.58□□□□□ -0.88
FNDC3B-212ENST00000494000 IQGAP3Q86VI3 1631 aa9.58□□□□□ -0.88
FNDC3B-212ENST00000494000 SCAF1Q9H7N4 1312 aaKnown RBP9.57□□□□□ -0.88
FNDC3B-212ENST00000494000 HECW2Q9P2P5 1572 aa9.57□□□□□ -0.88
FNDC3B-212ENST00000494000 ANKRD30BQ9BXX2 1392 aa9.57□□□□□ -0.88
FNDC3B-212ENST00000494000 DHX29Q7Z478 1369 aaKnown RBP9.56□□□□□ -0.88
FNDC3B-212ENST00000494000 FAM135AQ9P2D6 1515 aa9.56□□□□□ -0.88
FNDC3B-212ENST00000494000 DEPDC5O75140 1603 aa9.55□□□□□ -0.88
FNDC3B-212ENST00000494000 IRX6P78412 446 aaPredicted RBP9.55□□□□□ -0.88
FNDC3B-212ENST00000494000 AFAP1Q8N556 730 aa9.55□□□□□ -0.88
FNDC3B-212ENST00000494000 RPRD2Q5VT52 1461 aaKnown RBP9.55□□□□□ -0.88
FNDC3B-212ENST00000494000 BCORL1Q5H9F3 1711 aa9.55□□□□□ -0.88
FNDC3B-212ENST00000494000 KIDINS220Q9ULH0 1771 aa9.55□□□□□ -0.88
FNDC3B-212ENST00000494000 FAM69CQ0P6D2 419 aa9.54□□□□□ -0.88
FNDC3B-212ENST00000494000 KANK1Q14678 1352 aa9.54□□□□□ -0.88
FNDC3B-212ENST00000494000 ZNF316A6NFI3 1004 aaPredicted RBP9.53□□□□□ -0.88
FNDC3B-212ENST00000494000 NEUROD1Q13562 356 aa9.53□□□□□ -0.88
FNDC3B-212ENST00000494000 SIN3AQ96ST3 1273 aa9.53□□□□□ -0.88
FNDC3B-212ENST00000494000 RICTORQ6R327 1708 aa9.53□□□□□ -0.88
FNDC3B-212ENST00000494000 ZMYM4Q5VZL5 1548 aa9.53□□□□□ -0.88
FNDC3B-212ENST00000494000 PPP1R15AO75807 674 aaPredicted RBP9.53□□□□□ -0.88
FNDC3B-212ENST00000494000 A2MP01023 1474 aa9.53□□□□□ -0.88
FNDC3B-212ENST00000494000 PKD2Q13563 968 aa9.52□□□□□ -0.88
FNDC3B-212ENST00000494000 MYT1LQ9UL68 1186 aa9.52□□□□□ -0.89
FNDC3B-212ENST00000494000 ATP10AO60312 1499 aa9.52□□□□□ -0.89
FNDC3B-212ENST00000494000 RNF17Q9BXT8 1623 aaKnown RBP9.52□□□□□ -0.89
FNDC3B-212ENST00000494000 KIF13AQ9H1H9 1805 aa9.51□□□□□ -0.89
FNDC3B-212ENST00000494000 VWDEQ8N2E2 1590 aa9.51□□□□□ -0.89
FNDC3B-212ENST00000494000 PRDM15P57071 1507 aaPredicted RBP9.51□□□□□ -0.89
FNDC3B-212ENST00000494000 PPRC1Q5VV67 1664 aaKnown RBP9.51□□□□□ -0.89
FNDC3B-212ENST00000494000 TET3O43151 1660 aa9.51□□□□□ -0.89
FNDC3B-212ENST00000494000 LMTK2Q8IWU2 1503 aa9.49□□□□□ -0.89
FNDC3B-212ENST00000494000 REREQ9P2R6 1566 aa9.49□□□□□ -0.89
FNDC3B-212ENST00000494000 CCDC136Q96JN2 1154 aa9.49□□□□□ -0.89
FNDC3B-212ENST00000494000 VSIG10Q8N0Z9 540 aa9.48□□□□□ -0.89
FNDC3B-212ENST00000494000 ABCA6Q8N139 1617 aa9.48□□□□□ -0.89
FNDC3B-212ENST00000494000 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.48□□□□□ -0.89
FNDC3B-212ENST00000494000 DIP2CQ9Y2E4 1556 aa9.48□□□□□ -0.89
FNDC3B-212ENST00000494000 PKNOX2Q96KN3 472 aa9.47□□□□□ -0.89
FNDC3B-212ENST00000494000 FRMPD1Q5SYB0 1578 aa9.47□□□□□ -0.89
FNDC3B-212ENST00000494000 STAC3Q96MF2 364 aa9.47□□□□□ -0.89
FNDC3B-212ENST00000494000 CCDC144AA2RUR9 1427 aa9.47□□□□□ -0.89
FNDC3B-212ENST00000494000 TSPOAP1O95153 1857 aa9.46□□□□□ -0.89
FNDC3B-212ENST00000494000 KIF3BO15066 747 aa9.46□□□□□ -0.89
FNDC3B-212ENST00000494000 CNKSR2Q8WXI2 1034 aa9.46□□□□□ -0.89
FNDC3B-212ENST00000494000 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.46□□□□□ -0.893e-8■□□□□ 8.6
FNDC3B-212ENST00000494000 ZC3H13Q5T200 1668 aaKnown RBP9.46□□□□□ -0.89
FNDC3B-212ENST00000494000 NEURL4Q96JN8 1562 aa9.46□□□□□ -0.89
FNDC3B-212ENST00000494000 MROH1Q8NDA8 1641 aa9.46□□□□□ -0.9
FNDC3B-212ENST00000494000 AGLP35573 1532 aa9.45□□□□□ -0.9
FNDC3B-212ENST00000494000 TRPM2O94759 1503 aa9.45□□□□□ -0.9
FNDC3B-212ENST00000494000 PTPRTO14522 1441 aa9.44□□□□□ -0.9
FNDC3B-212ENST00000494000 E9PCH4 1651 aa9.44□□□□□ -0.9
FNDC3B-212ENST00000494000 NPM3O75607 178 aaKnown RBP9.44□□□□□ -0.9
FNDC3B-212ENST00000494000 SPHKAPQ2M3C7 1700 aa9.44□□□□□ -0.9
FNDC3B-212ENST00000494000 EFCAB6Q5THR3 1501 aa9.44□□□□□ -0.9
FNDC3B-212ENST00000494000 RAPGEF3O95398 923 aa9.44□□□□□ -0.9
FNDC3B-212ENST00000494000 L3MBTL2Q969R5 705 aa9.44□□□□□ -0.9
FNDC3B-212ENST00000494000 UHRF1BP1Q6BDS2 1440 aa9.43□□□□□ -0.9
FNDC3B-212ENST00000494000 ANO8Q9HCE9 1232 aaPredicted RBP9.43□□□□□ -0.9
FNDC3B-212ENST00000494000 MSH5O43196 834 aa9.43□□□□□ -0.9
FNDC3B-212ENST00000494000 CDK11BP21127 795 aaKnown RBP9.43□□□□□ -0.9
FNDC3B-212ENST00000494000 ZNF428Q96B54 188 aa9.43□□□□□ -0.9
FNDC3B-212ENST00000494000 ARID3AQ99856 593 aa9.43□□□□□ -0.9
FNDC3B-212ENST00000494000 BRD2P25440 801 aaKnown RBP9.42□□□□□ -0.9
FNDC3B-212ENST00000494000 PLA2R1Q13018 1463 aa9.41□□□□□ -0.9
FNDC3B-212ENST00000494000 ARHGAP31Q2M1Z3 1444 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms