RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 DNMT1P26358 1616 aaKnown RBP10.69□□□□□ -0.7
TOP3A-207ENST00000493648 SHANK2Q9UPX8 1470 aa10.69□□□□□ -0.7
TOP3A-207ENST00000493648 ANKRD30AQ9BXX3 1397 aa10.69□□□□□ -0.7
TOP3A-207ENST00000493648 DUOX2Q9NRD8 1548 aa10.68□□□□□ -0.7
TOP3A-207ENST00000493648 MROH2AA6NES4 1674 aa10.68□□□□□ -0.7
TOP3A-207ENST00000493648 CLTCQ00610 1675 aaKnown RBP10.68□□□□□ -0.7
TOP3A-207ENST00000493648 LMTK3Q96Q04 1460 aa10.68□□□□□ -0.7
TOP3A-207ENST00000493648 KIF15Q9NS87 1388 aa10.67□□□□□ -0.7
TOP3A-207ENST00000493648 CROCC2H7BZ55 1655 aa10.67□□□□□ -0.7
TOP3A-207ENST00000493648 HSPA2P54652 639 aa10.67□□□□□ -0.7
TOP3A-207ENST00000493648 PREX1Q8TCU6 1659 aa10.66□□□□□ -0.7
TOP3A-207ENST00000493648 NPATQ14207 1427 aa10.66□□□□□ -0.7
TOP3A-207ENST00000493648 UHRF1BP1Q6BDS2 1440 aa10.66□□□□□ -0.7
TOP3A-207ENST00000493648 NCOA1Q15788 1441 aa10.65□□□□□ -0.7
TOP3A-207ENST00000493648 EIF2AK4Q9P2K8 1649 aaKnown RBP10.65□□□□□ -0.7
TOP3A-207ENST00000493648 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.65□□□□□ -0.71
TOP3A-207ENST00000493648 FAM135AQ9P2D6 1515 aa10.64□□□□□ -0.71
TOP3A-207ENST00000493648 ITGAEP38570 1179 aa10.64□□□□□ -0.71
TOP3A-207ENST00000493648 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.64□□□□□ -0.71
TOP3A-207ENST00000493648 PTPRKQ15262 1439 aa10.64□□□□□ -0.71
TOP3A-207ENST00000493648 ERBINQ96RT1 1412 aa10.64□□□□□ -0.71
TOP3A-207ENST00000493648 KDM5DQ9BY66 1539 aa10.63□□□□□ -0.71
TOP3A-207ENST00000493648 RNF17Q9BXT8 1623 aaKnown RBP10.62□□□□□ -0.71
TOP3A-207ENST00000493648 ADGRL2O95490 1459 aa10.62□□□□□ -0.71
TOP3A-207ENST00000493648 FBXO31Q5XUX0 539 aaPredicted RBP10.62□□□□□ -0.71
TOP3A-207ENST00000493648 DMRT2Q9Y5R5 561 aa10.62□□□□□ -0.71
TOP3A-207ENST00000493648 KANK1Q14678 1352 aa10.62□□□□□ -0.71
TOP3A-207ENST00000493648 PZPP20742 1482 aa10.6□□□□□ -0.71
TOP3A-207ENST00000493648 ANKRD50Q9ULJ7 1429 aa10.59□□□□□ -0.71
TOP3A-207ENST00000493648 ROCK1Q13464 1354 aa10.59□□□□□ -0.71
TOP3A-207ENST00000493648 TNRQ92752 1358 aa10.59□□□□□ -0.71
TOP3A-207ENST00000493648 ZC3H13Q5T200 1668 aaKnown RBP10.59□□□□□ -0.71
TOP3A-207ENST00000493648 RRBP1Q9P2E9 1410 aaKnown RBP10.58□□□□□ -0.72
TOP3A-207ENST00000493648 ABCC3O15438 1527 aa10.58□□□□□ -0.72
TOP3A-207ENST00000493648 CFAP65Q6ZU64 1925 aaKnown RBP10.57□□□□□ -0.72
TOP3A-207ENST00000493648 MROH1Q8NDA8 1641 aa10.57□□□□□ -0.72
TOP3A-207ENST00000493648 CEP152O94986 1710 aa10.56□□□□□ -0.72
TOP3A-207ENST00000493648 DEPDC5O75140 1603 aa10.56□□□□□ -0.72
TOP3A-207ENST00000493648 THEMISQ8N1K5 641 aaPredicted RBP10.56□□□□□ -0.72
TOP3A-207ENST00000493648 PRDM15P57071 1507 aaPredicted RBP10.56□□□□□ -0.72
TOP3A-207ENST00000493648 ARHGAP31Q2M1Z3 1444 aa10.56□□□□□ -0.72
TOP3A-207ENST00000493648 A2ML1A8K2U0 1454 aa10.55□□□□□ -0.72
TOP3A-207ENST00000493648 MYO3AQ8NEV4 1616 aa10.55□□□□□ -0.72
TOP3A-207ENST00000493648 CEP170BQ9Y4F5 1589 aaPredicted RBP10.55□□□□□ -0.72
TOP3A-207ENST00000493648 CAMSAP1Q5T5Y3 1602 aa10.55□□□□□ -0.72
TOP3A-207ENST00000493648 PKD2Q13563 968 aa10.54□□□□□ -0.72
TOP3A-207ENST00000493648 STRCQ7RTU9 1775 aa10.54□□□□□ -0.72
TOP3A-207ENST00000493648 NLRP1Q9C000 1473 aa10.54□□□□□ -0.72
TOP3A-207ENST00000493648 NCKAP5LQ9HCH0 1330 aa10.54□□□□□ -0.72
TOP3A-207ENST00000493648 ZNF142P52746 1687 aaPredicted RBP10.53□□□□□ -0.72
TOP3A-207ENST00000493648 ERVK-7P63135 1459 aa10.53□□□□□ -0.72
TOP3A-207ENST00000493648 LMTK2Q8IWU2 1503 aa10.53□□□□□ -0.72
TOP3A-207ENST00000493648 PTPRTO14522 1441 aa10.52□□□□□ -0.73
TOP3A-207ENST00000493648 ANKLE2Q86XL3 938 aa10.52□□□□□ -0.73
TOP3A-207ENST00000493648 SPATA31D1Q6ZQQ2 1576 aa10.52□□□□□ -0.73
TOP3A-207ENST00000493648 VWDEQ8N2E2 1590 aa10.52□□□□□ -0.73
TOP3A-207ENST00000493648 PLA2R1Q13018 1463 aa10.51□□□□□ -0.73
TOP3A-207ENST00000493648 STAG3Q9UJ98 1225 aa10.51□□□□□ -0.73
TOP3A-207ENST00000493648 NUP155O75694 1391 aa10.51□□□□□ -0.73
TOP3A-207ENST00000493648 UGGT1Q9NYU2 1555 aa10.5□□□□□ -0.73
TOP3A-207ENST00000493648 SLC52A1Q9NWF4 448 aa10.49□□□□□ -0.73
TOP3A-207ENST00000493648 UNC13BO14795 1591 aa10.48□□□□□ -0.73
TOP3A-207ENST00000493648 IDI1Q13907 227 aa10.48□□□□□ -0.73
TOP3A-207ENST00000493648 NAIPQ13075 1403 aa10.48□□□□□ -0.73
TOP3A-207ENST00000493648 RPRD2Q5VT52 1461 aaKnown RBP10.48□□□□□ -0.73
TOP3A-207ENST00000493648 EFCAB6Q5THR3 1501 aa10.48□□□□□ -0.73
TOP3A-207ENST00000493648 TET3O43151 1660 aa10.47□□□□□ -0.73
TOP3A-207ENST00000493648 CERKQ8TCT0 537 aa10.47□□□□□ -0.73
TOP3A-207ENST00000493648 TRIM52Q96A61 297 aa10.47□□□□□ -0.73
TOP3A-207ENST00000493648 EID1Q9Y6B2 187 aa10.47□□□□□ -0.73
TOP3A-207ENST00000493648 HFM1A2PYH4 1435 aa10.46□□□□□ -0.74
TOP3A-207ENST00000493648 NOS1P29475 1434 aa10.46□□□□□ -0.74
TOP3A-207ENST00000493648 GCC2Q8IWJ2 1684 aa10.46□□□□□ -0.74
TOP3A-207ENST00000493648 IQGAP3Q86VI3 1631 aa10.45□□□□□ -0.74
TOP3A-207ENST00000493648 TXNDC2Q86VQ3 553 aa10.45□□□□□ -0.74
TOP3A-207ENST00000493648 UBR1Q8IWV7 1749 aa10.44□□□□□ -0.74
TOP3A-207ENST00000493648 ACIN1Q9UKV3 1341 aaKnown RBP10.44□□□□□ -0.74
TOP3A-207ENST00000493648 HDGFP51858 240 aaKnown RBP10.44□□□□□ -0.74
TOP3A-207ENST00000493648 ILDR1Q86SU0 546 aaPredicted RBP10.44□□□□□ -0.74
TOP3A-207ENST00000493648 FBXO41Q8TF61 875 aa10.44□□□□□ -0.74
TOP3A-207ENST00000493648 POLR1AO95602 1720 aaPredicted RBP10.44□□□□□ -0.74
TOP3A-207ENST00000493648 CHGAP10645 457 aaKnown RBP10.43□□□□□ -0.74
TOP3A-207ENST00000493648 E9PCH4 1651 aa10.43□□□□□ -0.74
TOP3A-207ENST00000493648 PIK3C2BO00750 1634 aa10.43□□□□□ -0.74
TOP3A-207ENST00000493648 SYNMO15061 1565 aa10.43□□□□□ -0.74
TOP3A-207ENST00000493648 NPHP4O75161 1426 aaPredicted RBP10.42□□□□□ -0.74
TOP3A-207ENST00000493648 LTKP29376 864 aa10.42□□□□□ -0.74
TOP3A-207ENST00000493648 MED14O60244 1454 aa10.42□□□□□ -0.74
TOP3A-207ENST00000493648 TMEM2Q9UHN6 1383 aa10.41□□□□□ -0.74
TOP3A-207ENST00000493648 KDM5AP29375 1690 aaKnown RBP10.41□□□□□ -0.74
TOP3A-207ENST00000493648 ZNF335Q9H4Z2 1342 aaPredicted RBP10.41□□□□□ -0.74
TOP3A-207ENST00000493648 SLC4A1APQ9BWU0 796 aaKnown RBP10.41□□□□□ -0.74
TOP3A-207ENST00000493648 SLIT1O75093 1534 aa10.41□□□□□ -0.74
TOP3A-207ENST00000493648 NEURL4Q96JN8 1562 aa10.4□□□□□ -0.74
TOP3A-207ENST00000493648 BCANQ96GW7 911 aa10.4□□□□□ -0.74
TOP3A-207ENST00000493648 SCAF11Q99590 1463 aaKnown RBP10.4□□□□□ -0.74
TOP3A-207ENST00000493648 ARHGAP23Q9P227 1491 aa10.4□□□□□ -0.74
TOP3A-207ENST00000493648 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.39□□□□□ -0.75
TOP3A-207ENST00000493648 LTBP4Q8N2S1 1624 aa10.39□□□□□ -0.75
TOP3A-207ENST00000493648 ADGRB3O60242 1522 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms