RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 KIF3BO15066 747 aa19.76■□□□□ 0.75
SAMM50-205ENST00000493621 UBAP1LF5GYI3 381 aa19.75■□□□□ 0.75
SAMM50-205ENST00000493621 POLR1AO95602 1720 aaPredicted RBP19.75■□□□□ 0.75
SAMM50-205ENST00000493621 FBXO31Q5XUX0 539 aaPredicted RBP19.74■□□□□ 0.75
SAMM50-205ENST00000493621 KDM5DQ9BY66 1539 aa19.74■□□□□ 0.75
SAMM50-205ENST00000493621 TNRQ92752 1358 aa19.73■□□□□ 0.75
SAMM50-205ENST00000493621 PZPP20742 1482 aa19.72■□□□□ 0.75
SAMM50-205ENST00000493621 FAM135AQ9P2D6 1515 aa19.71■□□□□ 0.75
SAMM50-205ENST00000493621 SOCS7O14512 581 aa19.71■□□□□ 0.75
SAMM50-205ENST00000493621 RSPH4AQ5TD94 716 aa19.71■□□□□ 0.75
SAMM50-205ENST00000493621 ARHGEF5Q12774 1597 aa19.7■□□□□ 0.74
SAMM50-205ENST00000493621 WASHC2CQ9Y4E1 1318 aa19.7■□□□□ 0.74
SAMM50-205ENST00000493621 NEURL4Q96JN8 1562 aa19.69■□□□□ 0.74
SAMM50-205ENST00000493621 TSPY4P0CV99 314 aa19.66■□□□□ 0.74
SAMM50-205ENST00000493621 TSPY10P0CW01 314 aa19.66■□□□□ 0.74
SAMM50-205ENST00000493621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.64■□□□□ 0.73
SAMM50-205ENST00000493621 MIA2Q96PC5 1412 aa19.64■□□□□ 0.73
SAMM50-205ENST00000493621 LRRC9Q6ZRR7 1453 aa19.63■□□□□ 0.73
SAMM50-205ENST00000493621 NLRP1Q9C000 1473 aa19.63■□□□□ 0.73
SAMM50-205ENST00000493621 RNF17Q9BXT8 1623 aaKnown RBP19.62■□□□□ 0.73
SAMM50-205ENST00000493621 UGGT1Q9NYU2 1555 aa19.62■□□□□ 0.73
SAMM50-205ENST00000493621 CPS1P31327 1500 aa19.62■□□□□ 0.73
SAMM50-205ENST00000493621 SHANK2Q9UPX8 1470 aa19.62■□□□□ 0.73
SAMM50-205ENST00000493621 ANKLE2Q86XL3 938 aa19.62■□□□□ 0.73
SAMM50-205ENST00000493621 MAST1Q9Y2H9 1570 aa19.61■□□□□ 0.73
SAMM50-205ENST00000493621 VPS8Q8N3P4 1428 aa19.61■□□□□ 0.73
SAMM50-205ENST00000493621 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
SAMM50-205ENST00000493621 THEMISQ8N1K5 641 aaPredicted RBP19.61■□□□□ 0.73
SAMM50-205ENST00000493621 ZC3H13Q5T200 1668 aaKnown RBP19.61■□□□□ 0.73
SAMM50-205ENST00000493621 DEPDC5O75140 1603 aa19.59■□□□□ 0.73
SAMM50-205ENST00000493621 VWDEQ8N2E2 1590 aa19.59■□□□□ 0.73
SAMM50-205ENST00000493621 PIP4K2BP78356 416 aa19.59■□□□□ 0.73
SAMM50-205ENST00000493621 ABCC3O15438 1527 aa19.59■□□□□ 0.73
SAMM50-205ENST00000493621 CFAP65Q6ZU64 1925 aaKnown RBP19.59■□□□□ 0.73
SAMM50-205ENST00000493621 EIF2AK4Q9P2K8 1649 aaKnown RBP19.58■□□□□ 0.73
SAMM50-205ENST00000493621 NPHP4O75161 1426 aaPredicted RBP19.58■□□□□ 0.72
SAMM50-205ENST00000493621 CEP152O94986 1710 aa19.57■□□□□ 0.72
SAMM50-205ENST00000493621 IQGAP1P46940 1657 aa19.57■□□□□ 0.72
SAMM50-205ENST00000493621 MED14O60244 1454 aa19.56■□□□□ 0.72
SAMM50-205ENST00000493621 TOM1O60784 492 aa19.56■□□□□ 0.72
SAMM50-205ENST00000493621 LOC105371045A0A1W2PR82 267 aa19.55■□□□□ 0.72
SAMM50-205ENST00000493621 HSPA1LP34931 641 aa19.55■□□□□ 0.72
SAMM50-205ENST00000493621 KANK4Q5T7N3 995 aaPredicted RBP19.55■□□□□ 0.72
SAMM50-205ENST00000493621 MROH1Q8NDA8 1641 aa19.54■□□□□ 0.72
SAMM50-205ENST00000493621 ERVK-7P63135 1459 aa19.54■□□□□ 0.72
SAMM50-205ENST00000493621 MYOM3Q5VTT5 1437 aa19.53■□□□□ 0.72
SAMM50-205ENST00000493621 MAP3K1Q13233 1512 aa19.53■□□□□ 0.72
SAMM50-205ENST00000493621 STRCP1A6NGW2 1772 aa19.52■□□□□ 0.71
SAMM50-205ENST00000493621 UBR1Q8IWV7 1749 aa19.51■□□□□ 0.71
SAMM50-205ENST00000493621 DUOX2Q9NRD8 1548 aa19.51■□□□□ 0.71
SAMM50-205ENST00000493621 MED1Q15648 1581 aaPredicted RBP19.49■□□□□ 0.71
SAMM50-205ENST00000493621 ALKQ9UM73 1620 aa19.48■□□□□ 0.71
SAMM50-205ENST00000493621 CROCC2H7BZ55 1655 aa19.48■□□□□ 0.71
SAMM50-205ENST00000493621 SYNMO15061 1565 aa19.45■□□□□ 0.7
SAMM50-205ENST00000493621 LRRC7Q96NW7 1537 aa19.45■□□□□ 0.7
SAMM50-205ENST00000493621 PRDM15P57071 1507 aaPredicted RBP19.44■□□□□ 0.7
SAMM50-205ENST00000493621 KIF15Q9NS87 1388 aa19.44■□□□□ 0.7
SAMM50-205ENST00000493621 PTPN23Q9H3S7 1636 aa19.43■□□□□ 0.7
SAMM50-205ENST00000493621 SCAF11Q99590 1463 aaKnown RBP19.42■□□□□ 0.7
SAMM50-205ENST00000493621 RRP7BPQ9NSQ0 103 aa19.42■□□□□ 0.7
SAMM50-205ENST00000493621 ABCC5O15440 1437 aa19.42■□□□□ 0.7
SAMM50-205ENST00000493621 ERBINQ96RT1 1412 aa19.42■□□□□ 0.7
SAMM50-205ENST00000493621 ARHGAP31Q2M1Z3 1444 aa19.41■□□□□ 0.7
SAMM50-205ENST00000493621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.4■□□□□ 0.7
SAMM50-205ENST00000493621 SENP3Q9H4L4 574 aaPredicted RBP19.4■□□□□ 0.7
SAMM50-205ENST00000493621 ARHGAP23Q9P227 1491 aa19.4■□□□□ 0.7
SAMM50-205ENST00000493621 SLIT1O75093 1534 aa19.4■□□□□ 0.7
SAMM50-205ENST00000493621 LTKP29376 864 aa19.39■□□□□ 0.69
SAMM50-205ENST00000493621 PIK3C2BO00750 1634 aa19.39■□□□□ 0.69
SAMM50-205ENST00000493621 TXNDC2Q86VQ3 553 aa19.38■□□□□ 0.69
SAMM50-205ENST00000493621 DAPK1P53355 1430 aa19.37■□□□□ 0.69
SAMM50-205ENST00000493621 APLP2Q06481 763 aa19.37■□□□□ 0.69
SAMM50-205ENST00000493621 XIRP1Q702N8 1843 aaKnown RBP19.37■□□□□ 0.69
SAMM50-205ENST00000493621 KANK1Q14678 1352 aa19.35■□□□□ 0.69
SAMM50-205ENST00000493621 PHF23Q9BUL5 403 aaPredicted RBP19.35■□□□□ 0.69
SAMM50-205ENST00000493621 EID1Q9Y6B2 187 aa19.35■□□□□ 0.69
SAMM50-205ENST00000493621 FGD6Q6ZV73 1430 aa19.34■□□□□ 0.69
SAMM50-205ENST00000493621 STAG3Q9UJ98 1225 aa19.33■□□□□ 0.68
SAMM50-205ENST00000493621 CHIC2Q9UKJ5 165 aa19.32■□□□□ 0.68
SAMM50-205ENST00000493621 TMEM2Q9UHN6 1383 aa19.32■□□□□ 0.68
SAMM50-205ENST00000493621 KDM5AP29375 1690 aaKnown RBP19.31■□□□□ 0.68
SAMM50-205ENST00000493621 ANKRD30AQ9BXX3 1397 aa19.31■□□□□ 0.68
SAMM50-205ENST00000493621 EFCAB6Q5THR3 1501 aa19.3■□□□□ 0.68
SAMM50-205ENST00000493621 LMTK2Q8IWU2 1503 aa19.3■□□□□ 0.68
SAMM50-205ENST00000493621 IDI1Q13907 227 aa19.27■□□□□ 0.68
SAMM50-205ENST00000493621 ADGRB3O60242 1522 aa19.24■□□□□ 0.67
SAMM50-205ENST00000493621 TET3O43151 1660 aa19.24■□□□□ 0.67
SAMM50-205ENST00000493621 NOS1P29475 1434 aa19.23■□□□□ 0.67
SAMM50-205ENST00000493621 TMEM94Q12767 1356 aa19.22■□□□□ 0.67
SAMM50-205ENST00000493621 SLC26A8Q96RN1 970 aa19.22■□□□□ 0.67
SAMM50-205ENST00000493621 ADGRL2O95490 1459 aa19.22■□□□□ 0.67
SAMM50-205ENST00000493621 MYO5BQ9ULV0 1848 aa19.21■□□□□ 0.67
SAMM50-205ENST00000493621 KCNA6P17658 529 aa19.21■□□□□ 0.67
SAMM50-205ENST00000493621 FAM135BQ49AJ0 1406 aa19.19■□□□□ 0.66
SAMM50-205ENST00000493621 FAM50AQ14320 339 aaKnown RBP19.19■□□□□ 0.66
SAMM50-205ENST00000493621 PROSER2Q86WR7 435 aaPredicted RBP19.19■□□□□ 0.66
SAMM50-205ENST00000493621 RBM33Q96EV2 1170 aaKnown RBP19.19■□□□□ 0.66
SAMM50-205ENST00000493621 ROBO1Q9Y6N7 1651 aa19.18■□□□□ 0.66
SAMM50-205ENST00000493621 BCANQ96GW7 911 aa19.18■□□□□ 0.66
SAMM50-205ENST00000493621 SLC52A1Q9NWF4 448 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 633.9 ms