RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 ARHGAP33O14559 1287 aa13.15□□□□□ -0.3
SMG7-208ENST00000493609 GPIHBP1Q8IV16 184 aa13.15□□□□□ -0.3
SMG7-208ENST00000493609 PRIM1P49642 420 aaKnown RBP13.14□□□□□ -0.31
SMG7-208ENST00000493609 PSEN2P49810 448 aa13.11□□□□□ -0.31
SMG7-208ENST00000493609 NUTM2FA1L443 756 aa13.1□□□□□ -0.31
SMG7-208ENST00000493609 ZMYND10O75800 440 aa13.1□□□□□ -0.31
SMG7-208ENST00000493609 DMRTA1Q5VZB9 504 aa13.1□□□□□ -0.31
SMG7-208ENST00000493609 PHF14O94880 888 aa13.09□□□□□ -0.31
SMG7-208ENST00000493609 PPP4R3BQ5MIZ7 849 aa13.09□□□□□ -0.31
SMG7-208ENST00000493609 ADGRD1Q6QNK2 874 aa13.09□□□□□ -0.31
SMG7-208ENST00000493609 PCDHGA10Q9Y5H3 936 aa13.09□□□□□ -0.31
SMG7-208ENST00000493609 SLC24A3Q9HC58 644 aa13.06□□□□□ -0.32
SMG7-208ENST00000493609 GPR37O15354 613 aa13.05□□□□□ -0.32
SMG7-208ENST00000493609 RBM33Q96EV2 1170 aaKnown RBP13.05□□□□□ -0.32
SMG7-208ENST00000493609 EPAS1Q99814 870 aa13.05□□□□□ -0.32
SMG7-208ENST00000493609 BARGINQ6ZT62 677 aa13.04□□□□□ -0.32
SMG7-208ENST00000493609 FOSBP53539 338 aa13.03□□□□□ -0.32
SMG7-208ENST00000493609 EN1Q05925 392 aaPredicted RBP13.03□□□□□ -0.32
SMG7-208ENST00000493609 TYW1BQ6NUM6 668 aa13.03□□□□□ -0.32
SMG7-208ENST00000493609 JPH4Q96JJ6 628 aa13.03□□□□□ -0.32
SMG7-208ENST00000493609 TK2O00142 265 aa13.02□□□□□ -0.33
SMG7-208ENST00000493609 HRO43593 1189 aa13.02□□□□□ -0.33
SMG7-208ENST00000493609 ZNF454Q8N9F8 522 aa13.02□□□□□ -0.33
SMG7-208ENST00000493609 MAP3K7O43318 606 aa13.01□□□□□ -0.33
SMG7-208ENST00000493609 KCNK17Q96T54 332 aa13.01□□□□□ -0.33
SMG7-208ENST00000493609 CDHR5Q9HBB8 845 aa13□□□□□ -0.33
SMG7-208ENST00000493609 TSR1Q2NL82 804 aaKnown RBP12.99□□□□□ -0.33
SMG7-208ENST00000493609 KRI1Q8N9T8 703 aaKnown RBP12.99□□□□□ -0.33
SMG7-208ENST00000493609 FBXW7Q969H0 707 aa12.98□□□□□ -0.33
SMG7-208ENST00000493609 FCHSD2O94868 740 aa12.97□□□□□ -0.33
SMG7-208ENST00000493609 PTGDRQ13258 359 aa12.97□□□□□ -0.33
SMG7-208ENST00000493609 ZDHHC16Q969W1 377 aa12.97□□□□□ -0.33
SMG7-208ENST00000493609 FECHP22830 423 aa12.95□□□□□ -0.34
SMG7-208ENST00000493609 ADAM33Q9BZ11 813 aa12.95□□□□□ -0.34
SMG7-208ENST00000493609 NPDC1Q9NQX5 325 aaPredicted RBP12.95□□□□□ -0.34
SMG7-208ENST00000493609 GNPATO15228 680 aa12.94□□□□□ -0.34
SMG7-208ENST00000493609 HIC1Q14526 733 aa12.94□□□□□ -0.34
SMG7-208ENST00000493609 C6orf132Q5T0Z8 1188 aa12.93□□□□□ -0.34
SMG7-208ENST00000493609 KCNH8Q96L42 1107 aa12.93□□□□□ -0.34
SMG7-208ENST00000493609 BCL2L12Q9HB09 334 aa12.93□□□□□ -0.34
SMG7-208ENST00000493609 HCSTQ9UBK5 93 aa12.93□□□□□ -0.34
SMG7-208ENST00000493609 VPS9D1Q9Y2B5 631 aa12.92□□□□□ -0.34
SMG7-208ENST00000493609 AK7Q96M32 723 aa12.9□□□□□ -0.34
SMG7-208ENST00000493609 STAC3Q96MF2 364 aa12.89□□□□□ -0.35
SMG7-208ENST00000493609 MAP2K5Q13163 448 aa12.88□□□□□ -0.35
SMG7-208ENST00000493609 KCTD12Q96CX2 325 aaKnown RBP12.88□□□□□ -0.35
SMG7-208ENST00000493609 MINK1Q8N4C8 1332 aaPredicted RBP12.87□□□□□ -0.35
SMG7-208ENST00000493609 IRF6O14896 467 aa12.86□□□□□ -0.35
SMG7-208ENST00000493609 PTPREP23469 700 aa12.86□□□□□ -0.35
SMG7-208ENST00000493609 BRPF1P55201 1214 aaPredicted RBP12.85□□□□□ -0.35
SMG7-208ENST00000493609 SLC4A5Q9BY07 1137 aa12.85□□□□□ -0.35
SMG7-208ENST00000493609 CCDC102AQ96A19 550 aa12.84□□□□□ -0.35
SMG7-208ENST00000493609 PLA2G2EQ9NZK7 142 aa12.84□□□□□ -0.35
SMG7-208ENST00000493609 TRIM66O15016 1216 aa12.83□□□□□ -0.36
SMG7-208ENST00000493609 ZBED2Q9BTP6 218 aa12.83□□□□□ -0.36
SMG7-208ENST00000493609 COL9A1P20849 921 aa12.82□□□□□ -0.36
SMG7-208ENST00000493609 NEUROD2Q15784 382 aa12.82□□□□□ -0.36
SMG7-208ENST00000493609 BHMG1C9JSJ3 638 aaPredicted RBP12.81□□□□□ -0.36
SMG7-208ENST00000493609 CERKQ8TCT0 537 aa12.81□□□□□ -0.36
SMG7-208ENST00000493609 PADI6Q6TGC4 694 aa12.8□□□□□ -0.36
SMG7-208ENST00000493609 FAM161AQ3B820 660 aa12.78□□□□□ -0.36
SMG7-208ENST00000493609 PRSS12P56730 875 aa12.77□□□□□ -0.37
SMG7-208ENST00000493609 PDE4DQ08499 809 aa12.77□□□□□ -0.37
SMG7-208ENST00000493609 PTPN5P54829 565 aa12.76□□□□□ -0.37
SMG7-208ENST00000493609 CDCA7LQ96GN5 454 aa12.76□□□□□ -0.37
SMG7-208ENST00000493609 PPP1R3GB7ZBB8 358 aa12.75□□□□□ -0.37
SMG7-208ENST00000493609 GPBP1L1Q9HC44 474 aaPredicted RBP12.75□□□□□ -0.37
SMG7-208ENST00000493609 TTC13Q8NBP0 860 aa12.74□□□□□ -0.37
SMG7-208ENST00000493609 FAM198AQ9UFP1 575 aa12.73□□□□□ -0.37
SMG7-208ENST00000493609 MRPL50Q8N5N7 158 aaKnown RBP12.72□□□□□ -0.37
SMG7-208ENST00000493609 RBM27Q9P2N5 1060 aaKnown RBP12.72□□□□□ -0.37
SMG7-208ENST00000493609 ADGRG1Q9Y653 693 aa12.71□□□□□ -0.37
SMG7-208ENST00000493609 GOLGA8CPA6NN73 597 aa12.7□□□□□ -0.38
SMG7-208ENST00000493609 AMHR2Q16671 573 aa12.7□□□□□ -0.38
SMG7-208ENST00000493609 PROX2Q3B8N5 592 aa12.7□□□□□ -0.38
SMG7-208ENST00000493609 THSD4Q6ZMP0 1018 aa12.7□□□□□ -0.38
SMG7-208ENST00000493609 PHOX2BQ99453 314 aa12.7□□□□□ -0.38
SMG7-208ENST00000493609 TSKSQ9UJT2 592 aa12.7□□□□□ -0.38
SMG7-208ENST00000493609 WNT2BQ93097 391 aa12.69□□□□□ -0.38
SMG7-208ENST00000493609 KDM4CQ9H3R0 1056 aa12.68□□□□□ -0.38
SMG7-208ENST00000493609 OATP04181 439 aa12.67□□□□□ -0.38
SMG7-208ENST00000493609 METTL3Q86U44 580 aaKnown RBP12.67□□□□□ -0.38
SMG7-208ENST00000493609 NBPF3Q9H094 633 aa12.67□□□□□ -0.38
SMG7-208ENST00000493609 TRIM6-TRIM34B2RNG4 842 aa12.66□□□□□ -0.38
SMG7-208ENST00000493609 C3orf80F5H4A9 247 aa12.66□□□□□ -0.38
SMG7-208ENST00000493609 TTLL12Q14166 644 aaPredicted RBP12.66□□□□□ -0.38
SMG7-208ENST00000493609 PARP9Q8IXQ6 854 aa12.66□□□□□ -0.38
SMG7-208ENST00000493609 NLRP7Q8WX94 980 aa12.66□□□□□ -0.38
SMG7-208ENST00000493609 PXYLP1Q8TE99 480 aa12.65□□□□□ -0.38
SMG7-208ENST00000493609 RABGEF1Q9UJ41 708 aa12.65□□□□□ -0.38
SMG7-208ENST00000493609 REPIN1Q9BWE0 567 aaKnown RBP12.64□□□□□ -0.39
SMG7-208ENST00000493609 MDM2Q00987 491 aaPredicted RBP12.63□□□□□ -0.39
SMG7-208ENST00000493609 TMEM132AQ24JP5 1023 aa12.62□□□□□ -0.39
SMG7-208ENST00000493609 NUDT18Q6ZVK8 323 aa12.62□□□□□ -0.39
SMG7-208ENST00000493609 PACS2Q86VP3 889 aa12.62□□□□□ -0.39
SMG7-208ENST00000493609 RBM46Q8TBY0 533 aaKnown RBP12.62□□□□□ -0.39
SMG7-208ENST00000493609 TATDN2Q93075 761 aa12.61□□□□□ -0.39
SMG7-208ENST00000493609 SMAPO00193 183 aa12.6□□□□□ -0.39
SMG7-208ENST00000493609 IL27Q8NEV9 243 aa12.6□□□□□ -0.39
SMG7-208ENST00000493609 EYA1Q99502 592 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms