RNA–Protein interactions for RNA: ENST00000493403.1

ARPC1B-221, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-221ENST00000493403 CEP162Q5TB80 1403 aa26.67■■□□□ 1.86
ARPC1B-221ENST00000493403 KDM5DQ9BY66 1539 aa26.65■■□□□ 1.86
ARPC1B-221ENST00000493403 POLR1AO95602 1720 aaPredicted RBP26.65■■□□□ 1.86
ARPC1B-221ENST00000493403 TOM1O60784 492 aa26.65■■□□□ 1.86
ARPC1B-221ENST00000493403 TNRQ92752 1358 aa26.65■■□□□ 1.86
ARPC1B-221ENST00000493403 PZPP20742 1482 aa26.65■■□□□ 1.86
ARPC1B-221ENST00000493403 ZNF644Q9H582 1327 aaPredicted RBP26.62■■□□□ 1.85
ARPC1B-221ENST00000493403 CCDC141Q6ZP82 1450 aa26.62■■□□□ 1.85
ARPC1B-221ENST00000493403 NLRP1Q9C000 1473 aa26.6■■□□□ 1.85
ARPC1B-221ENST00000493403 SHANK2Q9UPX8 1470 aa26.6■■□□□ 1.85
ARPC1B-221ENST00000493403 KIF3BO15066 747 aa26.59■■□□□ 1.85
ARPC1B-221ENST00000493403 ANKLE2Q86XL3 938 aa26.59■■□□□ 1.85
ARPC1B-221ENST00000493403 THEMISQ8N1K5 641 aaPredicted RBP26.59■■□□□ 1.85
ARPC1B-221ENST00000493403 WASHC2CQ9Y4E1 1318 aa26.58■■□□□ 1.85
ARPC1B-221ENST00000493403 NEURL4Q96JN8 1562 aa26.57■■□□□ 1.84
ARPC1B-221ENST00000493403 DEPDC5O75140 1603 aa26.54■■□□□ 1.84
ARPC1B-221ENST00000493403 MIA2Q96PC5 1412 aa26.54■■□□□ 1.84
ARPC1B-221ENST00000493403 MED14O60244 1454 aa26.54■■□□□ 1.84
ARPC1B-221ENST00000493403 CAMSAP2Q08AD1 1489 aa26.52■■□□□ 1.84
ARPC1B-221ENST00000493403 FBXO31Q5XUX0 539 aaPredicted RBP26.52■■□□□ 1.84
ARPC1B-221ENST00000493403 SCAF1Q9H7N4 1312 aaKnown RBP26.52■■□□□ 1.84
ARPC1B-221ENST00000493403 UGGT1Q9NYU2 1555 aa26.51■■□□□ 1.83
ARPC1B-221ENST00000493403 TSPY4P0CV99 314 aa26.5■■□□□ 1.83
ARPC1B-221ENST00000493403 TSPY10P0CW01 314 aa26.5■■□□□ 1.83
ARPC1B-221ENST00000493403 HSPA1LP34931 641 aa26.5■■□□□ 1.83
ARPC1B-221ENST00000493403 ARHGEF5Q12774 1597 aa26.5■■□□□ 1.83
ARPC1B-221ENST00000493403 PIP4K2BP78356 416 aa26.49■■□□□ 1.83
ARPC1B-221ENST00000493403 MED1Q15648 1581 aaPredicted RBP26.49■■□□□ 1.83
ARPC1B-221ENST00000493403 NCOA2Q15596 1464 aa26.49■■□□□ 1.83
ARPC1B-221ENST00000493403 NPHP4O75161 1426 aaPredicted RBP26.48■■□□□ 1.83
ARPC1B-221ENST00000493403 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.48■■□□□ 1.83
ARPC1B-221ENST00000493403 VWDEQ8N2E2 1590 aa26.46■■□□□ 1.83
ARPC1B-221ENST00000493403 ZC3H13Q5T200 1668 aaKnown RBP26.45■■□□□ 1.82
ARPC1B-221ENST00000493403 IQGAP1P46940 1657 aa26.41■■□□□ 1.82
ARPC1B-221ENST00000493403 RNF17Q9BXT8 1623 aaKnown RBP26.41■■□□□ 1.82
ARPC1B-221ENST00000493403 EIF2AK4Q9P2K8 1649 aaKnown RBP26.39■■□□□ 1.81
ARPC1B-221ENST00000493403 SYNMO15061 1565 aa26.38■■□□□ 1.81
ARPC1B-221ENST00000493403 MAST1Q9Y2H9 1570 aa26.38■■□□□ 1.81
ARPC1B-221ENST00000493403 ABCC3O15438 1527 aa26.36■■□□□ 1.81
ARPC1B-221ENST00000493403 PHF23Q9BUL5 403 aaPredicted RBP26.36■■□□□ 1.81
ARPC1B-221ENST00000493403 ERVK-7P63135 1459 aa26.32■■□□□ 1.8
ARPC1B-221ENST00000493403 LRRC7Q96NW7 1537 aa26.31■■□□□ 1.8
ARPC1B-221ENST00000493403 ALKQ9UM73 1620 aa26.3■■□□□ 1.8
ARPC1B-221ENST00000493403 LRRC9Q6ZRR7 1453 aa26.27■■□□□ 1.8
ARPC1B-221ENST00000493403 SCAF11Q99590 1463 aaKnown RBP26.26■■□□□ 1.79
ARPC1B-221ENST00000493403 DUOX2Q9NRD8 1548 aa26.24■■□□□ 1.79
ARPC1B-221ENST00000493403 UBR1Q8IWV7 1749 aa26.24■■□□□ 1.79
ARPC1B-221ENST00000493403 ARHGAP31Q2M1Z3 1444 aa26.23■■□□□ 1.79
ARPC1B-221ENST00000493403 SLIT1O75093 1534 aa26.23■■□□□ 1.79
ARPC1B-221ENST00000493403 MAP3K1Q13233 1512 aa26.23■■□□□ 1.79
ARPC1B-221ENST00000493403 STRCP1A6NGW2 1772 aa26.23■■□□□ 1.79
ARPC1B-221ENST00000493403 MYOM3Q5VTT5 1437 aa26.22■■□□□ 1.79
ARPC1B-221ENST00000493403 MROH1Q8NDA8 1641 aa26.22■■□□□ 1.79
ARPC1B-221ENST00000493403 VPS8Q8N3P4 1428 aa26.22■■□□□ 1.79
ARPC1B-221ENST00000493403 ARHGAP23Q9P227 1491 aa26.21■■□□□ 1.79
ARPC1B-221ENST00000493403 EID1Q9Y6B2 187 aa26.2■■□□□ 1.78
ARPC1B-221ENST00000493403 PRDM15P57071 1507 aaPredicted RBP26.18■■□□□ 1.78
ARPC1B-221ENST00000493403 CEP152O94986 1710 aa26.17■■□□□ 1.78
ARPC1B-221ENST00000493403 ERBINQ96RT1 1412 aa26.17■■□□□ 1.78
ARPC1B-221ENST00000493403 TXNDC2Q86VQ3 553 aa26.16■■□□□ 1.78
ARPC1B-221ENST00000493403 KDM5AP29375 1690 aaKnown RBP26.12■■□□□ 1.77
ARPC1B-221ENST00000493403 KIF15Q9NS87 1388 aa26.11■■□□□ 1.77
ARPC1B-221ENST00000493403 LTKP29376 864 aa26.11■■□□□ 1.77
ARPC1B-221ENST00000493403 KANK1Q14678 1352 aa26.1■■□□□ 1.77
ARPC1B-221ENST00000493403 FAM135BQ49AJ0 1406 aa26.1■■□□□ 1.77
ARPC1B-221ENST00000493403 CFAP65Q6ZU64 1925 aaKnown RBP26.09■■□□□ 1.77
ARPC1B-221ENST00000493403 TMEM2Q9UHN6 1383 aa26.08■■□□□ 1.77
ARPC1B-221ENST00000493403 STAG3Q9UJ98 1225 aa26.07■■□□□ 1.76
ARPC1B-221ENST00000493403 CROCC2H7BZ55 1655 aa26.04■■□□□ 1.76
ARPC1B-221ENST00000493403 XIRP1Q702N8 1843 aaKnown RBP26.04■■□□□ 1.76
ARPC1B-221ENST00000493403 PIK3C2BO00750 1634 aa26.03■■□□□ 1.76
ARPC1B-221ENST00000493403 EFCAB6Q5THR3 1501 aa26.03■■□□□ 1.76
ARPC1B-221ENST00000493403 LMTK2Q8IWU2 1503 aa26.03■■□□□ 1.76
ARPC1B-221ENST00000493403 KANK4Q5T7N3 995 aaPredicted RBP26.02■■□□□ 1.76
ARPC1B-221ENST00000493403 SENP3Q9H4L4 574 aaPredicted RBP26.02■■□□□ 1.76
ARPC1B-221ENST00000493403 ABCC5O15440 1437 aa26.01■■□□□ 1.75
ARPC1B-221ENST00000493403 KCNA6P17658 529 aa26.01■■□□□ 1.75
ARPC1B-221ENST00000493403 RRP7BPQ9NSQ0 103 aa26■■□□□ 1.75
ARPC1B-221ENST00000493403 TMEM94Q12767 1356 aa25.98■■□□□ 1.75
ARPC1B-221ENST00000493403 PTPN23Q9H3S7 1636 aa25.97■■□□□ 1.75
ARPC1B-221ENST00000493403 RGS17Q9UGC6 210 aaPredicted RBP25.97■■□□□ 1.75
ARPC1B-221ENST00000493403 NKTRP30414 1462 aaKnown RBP25.97■■□□□ 1.75
ARPC1B-221ENST00000493403 DAPK1P53355 1430 aa25.97■■□□□ 1.75
ARPC1B-221ENST00000493403 ANKRD30AQ9BXX3 1397 aa25.96■■□□□ 1.75
ARPC1B-221ENST00000493403 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.96■■□□□ 1.75
ARPC1B-221ENST00000493403 TET3O43151 1660 aa25.94■■□□□ 1.74
ARPC1B-221ENST00000493403 APLP2Q06481 763 aa25.94■■□□□ 1.74
ARPC1B-221ENST00000493403 IDI1Q13907 227 aa25.94■■□□□ 1.74
ARPC1B-221ENST00000493403 SLC52A1Q9NWF4 448 aa25.94■■□□□ 1.74
ARPC1B-221ENST00000493403 PROSER2Q86WR7 435 aaPredicted RBP25.92■■□□□ 1.74
ARPC1B-221ENST00000493403 NOS1P29475 1434 aa25.91■■□□□ 1.74
ARPC1B-221ENST00000493403 ADGRB3O60242 1522 aa25.91■■□□□ 1.74
ARPC1B-221ENST00000493403 NWD1Q149M9 1564 aa25.9■■□□□ 1.74
ARPC1B-221ENST00000493403 ROBO1Q9Y6N7 1651 aa25.9■■□□□ 1.74
ARPC1B-221ENST00000493403 MSH6P52701 1360 aa25.9■■□□□ 1.74
ARPC1B-221ENST00000493403 HDGFP51858 240 aaKnown RBP25.89■■□□□ 1.74
ARPC1B-221ENST00000493403 RPRD2Q5VT52 1461 aaKnown RBP25.89■■□□□ 1.73
ARPC1B-221ENST00000493403 FGD6Q6ZV73 1430 aa25.88■■□□□ 1.73
ARPC1B-221ENST00000493403 SLC26A8Q96RN1 970 aa25.86■■□□□ 1.73
ARPC1B-221ENST00000493403 NCOA3Q9Y6Q9 1424 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms