RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 PTPRTO14522 1441 aa17.87■□□□□ 0.45
LRTM1-202ENST00000493075 TCOF1Q13428 1488 aaKnown RBP17.86■□□□□ 0.45
LRTM1-202ENST00000493075 NCOA1Q15788 1441 aa17.85■□□□□ 0.45
LRTM1-202ENST00000493075 KDM5DQ9BY66 1539 aa17.84■□□□□ 0.45
LRTM1-202ENST00000493075 SHANK2Q9UPX8 1470 aa17.84■□□□□ 0.45
LRTM1-202ENST00000493075 FBXO31Q5XUX0 539 aaPredicted RBP17.84■□□□□ 0.45
LRTM1-202ENST00000493075 CERKQ8TCT0 537 aa17.84■□□□□ 0.45
LRTM1-202ENST00000493075 PTPN23Q9H3S7 1636 aa17.83■□□□□ 0.44
LRTM1-202ENST00000493075 PZPP20742 1482 aa17.83■□□□□ 0.44
LRTM1-202ENST00000493075 DAPK1P53355 1430 aa17.82■□□□□ 0.44
LRTM1-202ENST00000493075 PKD2Q13563 968 aa17.82■□□□□ 0.44
LRTM1-202ENST00000493075 FOXD1Q16676 465 aa17.82■□□□□ 0.44
LRTM1-202ENST00000493075 RRP7BPQ9NSQ0 103 aa17.82■□□□□ 0.44
LRTM1-202ENST00000493075 DUOX2Q9NRD8 1548 aa17.82■□□□□ 0.44
LRTM1-202ENST00000493075 STRCQ7RTU9 1775 aa17.81■□□□□ 0.44
LRTM1-202ENST00000493075 TNRQ92752 1358 aa17.81■□□□□ 0.44
LRTM1-202ENST00000493075 KIF15Q9NS87 1388 aa17.81■□□□□ 0.44
LRTM1-202ENST00000493075 A2ML1A8K2U0 1454 aa17.78■□□□□ 0.44
LRTM1-202ENST00000493075 PLA2R1Q13018 1463 aa17.78■□□□□ 0.44
LRTM1-202ENST00000493075 ANKRD30AQ9BXX3 1397 aa17.78■□□□□ 0.44
LRTM1-202ENST00000493075 CAMSAP1Q5T5Y3 1602 aa17.78■□□□□ 0.44
LRTM1-202ENST00000493075 ERBINQ96RT1 1412 aa17.78■□□□□ 0.44
LRTM1-202ENST00000493075 NCKAP5LQ9HCH0 1330 aa17.78■□□□□ 0.44
LRTM1-202ENST00000493075 RNF17Q9BXT8 1623 aaKnown RBP17.77■□□□□ 0.44
LRTM1-202ENST00000493075 EIF2AK4Q9P2K8 1649 aaKnown RBP17.77■□□□□ 0.44
LRTM1-202ENST00000493075 CEP170BQ9Y4F5 1589 aaPredicted RBP17.77■□□□□ 0.43
LRTM1-202ENST00000493075 CHIC2Q9UKJ5 165 aa17.76■□□□□ 0.43
LRTM1-202ENST00000493075 DNMT1P26358 1616 aaKnown RBP17.76■□□□□ 0.43
LRTM1-202ENST00000493075 MYO3AQ8NEV4 1616 aa17.76■□□□□ 0.43
LRTM1-202ENST00000493075 FAM50AQ14320 339 aaKnown RBP17.75■□□□□ 0.43
LRTM1-202ENST00000493075 ABCC3O15438 1527 aa17.75■□□□□ 0.43
LRTM1-202ENST00000493075 THEMISQ8N1K5 641 aaPredicted RBP17.74■□□□□ 0.43
LRTM1-202ENST00000493075 ZNF142P52746 1687 aaPredicted RBP17.74■□□□□ 0.43
LRTM1-202ENST00000493075 NLRP1Q9C000 1473 aa17.73■□□□□ 0.43
LRTM1-202ENST00000493075 MROH1Q8NDA8 1641 aa17.71■□□□□ 0.43
LRTM1-202ENST00000493075 ARHGAP31Q2M1Z3 1444 aa17.71■□□□□ 0.43
LRTM1-202ENST00000493075 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.71■□□□□ 0.42
LRTM1-202ENST00000493075 KANK1Q14678 1352 aa17.7■□□□□ 0.42
LRTM1-202ENST00000493075 ADGRL2O95490 1459 aa17.7■□□□□ 0.42
LRTM1-202ENST00000493075 CROCC2H7BZ55 1655 aa17.7■□□□□ 0.42
LRTM1-202ENST00000493075 ZC3H13Q5T200 1668 aaKnown RBP17.7■□□□□ 0.42
LRTM1-202ENST00000493075 ANKLE2Q86XL3 938 aa17.7■□□□□ 0.42
LRTM1-202ENST00000493075 SPATA31D1Q6ZQQ2 1576 aa17.68■□□□□ 0.42
LRTM1-202ENST00000493075 ERVK-7P63135 1459 aa17.68■□□□□ 0.42
LRTM1-202ENST00000493075 PRDM15P57071 1507 aaPredicted RBP17.68■□□□□ 0.42
LRTM1-202ENST00000493075 LTBP4Q8N2S1 1624 aa17.66■□□□□ 0.42
LRTM1-202ENST00000493075 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.66■□□□□ 0.42
LRTM1-202ENST00000493075 UGGT1Q9NYU2 1555 aa17.65■□□□□ 0.42
LRTM1-202ENST00000493075 ANKRD50Q9ULJ7 1429 aa17.64■□□□□ 0.41
LRTM1-202ENST00000493075 ZNF335Q9H4Z2 1342 aaPredicted RBP17.64■□□□□ 0.41
LRTM1-202ENST00000493075 LMTK2Q8IWU2 1503 aa17.64■□□□□ 0.41
LRTM1-202ENST00000493075 IQSEC2Q5JU85 1478 aa17.63■□□□□ 0.41
LRTM1-202ENST00000493075 ROCK1Q13464 1354 aa17.62■□□□□ 0.41
LRTM1-202ENST00000493075 DEPDC5O75140 1603 aa17.62■□□□□ 0.41
LRTM1-202ENST00000493075 VWDEQ8N2E2 1590 aa17.6■□□□□ 0.41
LRTM1-202ENST00000493075 MED14O60244 1454 aa17.6■□□□□ 0.41
LRTM1-202ENST00000493075 PPARGC1BQ86YN6 1023 aaKnown RBP17.6■□□□□ 0.41
LRTM1-202ENST00000493075 CEP152O94986 1710 aa17.57■□□□□ 0.4
LRTM1-202ENST00000493075 NPHP4O75161 1426 aaPredicted RBP17.57■□□□□ 0.4
LRTM1-202ENST00000493075 NEURL4Q96JN8 1562 aa17.57■□□□□ 0.4
LRTM1-202ENST00000493075 IDI1Q13907 227 aa17.56■□□□□ 0.4
LRTM1-202ENST00000493075 SLC52A1Q9NWF4 448 aa17.56■□□□□ 0.4
LRTM1-202ENST00000493075 NOS1P29475 1434 aa17.55■□□□□ 0.4
LRTM1-202ENST00000493075 TXNDC2Q86VQ3 553 aa17.54■□□□□ 0.4
LRTM1-202ENST00000493075 STAG3Q9UJ98 1225 aa17.54■□□□□ 0.4
LRTM1-202ENST00000493075 LTKP29376 864 aa17.53■□□□□ 0.4
LRTM1-202ENST00000493075 EID1Q9Y6B2 187 aa17.53■□□□□ 0.4
LRTM1-202ENST00000493075 RPRD2Q5VT52 1461 aaKnown RBP17.53■□□□□ 0.4
LRTM1-202ENST00000493075 ARHGAP23Q9P227 1491 aa17.53■□□□□ 0.4
LRTM1-202ENST00000493075 ITGAEP38570 1179 aa17.52■□□□□ 0.4
LRTM1-202ENST00000493075 TMEM2Q9UHN6 1383 aa17.52■□□□□ 0.39
LRTM1-202ENST00000493075 SLIT1O75093 1534 aa17.51■□□□□ 0.39
LRTM1-202ENST00000493075 CPS1P31327 1500 aa17.51■□□□□ 0.39
LRTM1-202ENST00000493075 EFCAB6Q5THR3 1501 aa17.51■□□□□ 0.39
LRTM1-202ENST00000493075 POLR1AO95602 1720 aaPredicted RBP17.5■□□□□ 0.39
LRTM1-202ENST00000493075 RRBP1Q9P2E9 1410 aaKnown RBP17.5■□□□□ 0.39
LRTM1-202ENST00000493075 SCAF11Q99590 1463 aaKnown RBP17.5■□□□□ 0.39
LRTM1-202ENST00000493075 UBAP1LF5GYI3 381 aa17.49■□□□□ 0.39
LRTM1-202ENST00000493075 UBR1Q8IWV7 1749 aa17.49■□□□□ 0.39
LRTM1-202ENST00000493075 NUP155O75694 1391 aa17.46■□□□□ 0.39
LRTM1-202ENST00000493075 CFAP65Q6ZU64 1925 aaKnown RBP17.45■□□□□ 0.38
LRTM1-202ENST00000493075 UNC13BO14795 1591 aa17.45■□□□□ 0.38
LRTM1-202ENST00000493075 SYNMO15061 1565 aa17.45■□□□□ 0.38
LRTM1-202ENST00000493075 PIK3C2BO00750 1634 aa17.44■□□□□ 0.38
LRTM1-202ENST00000493075 IQGAP1P46940 1657 aa17.44■□□□□ 0.38
LRTM1-202ENST00000493075 TOM1O60784 492 aa17.44■□□□□ 0.38
LRTM1-202ENST00000493075 HDGFP51858 240 aaKnown RBP17.44■□□□□ 0.38
LRTM1-202ENST00000493075 KDM5AP29375 1690 aaKnown RBP17.43■□□□□ 0.38
LRTM1-202ENST00000493075 TET3O43151 1660 aa17.43■□□□□ 0.38
LRTM1-202ENST00000493075 ADGRB3O60242 1522 aa17.39■□□□□ 0.37
LRTM1-202ENST00000493075 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
LRTM1-202ENST00000493075 IQGAP3Q86VI3 1631 aa17.38■□□□□ 0.37
LRTM1-202ENST00000493075 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.38■□□□□ 0.37
LRTM1-202ENST00000493075 LRRC7Q96NW7 1537 aa17.38■□□□□ 0.37
LRTM1-202ENST00000493075 NAIPQ13075 1403 aa17.37■□□□□ 0.37
LRTM1-202ENST00000493075 KCNA6P17658 529 aa17.37■□□□□ 0.37
LRTM1-202ENST00000493075 GCC2Q8IWJ2 1684 aa17.36■□□□□ 0.37
LRTM1-202ENST00000493075 SLC26A8Q96RN1 970 aa17.36■□□□□ 0.37
LRTM1-202ENST00000493075 ZFYVE9O95405 1425 aa17.36■□□□□ 0.37
LRTM1-202ENST00000493075 CHGAP10645 457 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms