RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 TRIM35Q9UPQ4 493 aa5.34□□□□□ -1.56
SNX13-209ENST00000492626 FOXK1P85037 733 aa5.33□□□□□ -1.56
SNX13-209ENST00000492626 SHROOM2Q13796 1616 aa5.33□□□□□ -1.56
SNX13-209ENST00000492626 MICALL2Q8IY33 904 aa5.33□□□□□ -1.56
SNX13-209ENST00000492626 L3MBTL3Q96JM7 780 aaPredicted RBP5.33□□□□□ -1.56
SNX13-209ENST00000492626 TTLL13PA6NNM8 815 aa5.33□□□□□ -1.56
SNX13-209ENST00000492626 PLCG2P16885 1265 aa5.33□□□□□ -1.56
SNX13-209ENST00000492626 MAGI1Q96QZ7 1491 aaPredicted RBP5.33□□□□□ -1.56
SNX13-209ENST00000492626 CCDC102AQ96A19 550 aa5.32□□□□□ -1.56
SNX13-209ENST00000492626 EMILIN3Q9NT22 766 aa5.31□□□□□ -1.56
SNX13-209ENST00000492626 BOLA1Q9Y3E2 137 aa5.31□□□□□ -1.56
SNX13-209ENST00000492626 IRF6O14896 467 aa5.31□□□□□ -1.56
SNX13-209ENST00000492626 RAD21O60216 631 aa5.31□□□□□ -1.56
SNX13-209ENST00000492626 CLCN6P51797 869 aa5.31□□□□□ -1.56
SNX13-209ENST00000492626 ABCC10Q5T3U5 1492 aa5.3□□□□□ -1.56
SNX13-209ENST00000492626 FAM117AQ9C073 453 aa5.3□□□□□ -1.56
SNX13-209ENST00000492626 DIP2BQ9P265 1576 aa5.3□□□□□ -1.56
SNX13-209ENST00000492626 UBTFP17480 764 aaKnown RBP5.29□□□□□ -1.56
SNX13-209ENST00000492626 OCEL1Q9H607 264 aa5.29□□□□□ -1.56
SNX13-209ENST00000492626 C2orf72A6NCS6 295 aa5.29□□□□□ -1.56
SNX13-209ENST00000492626 DDX12PQ92771 950 aa5.29□□□□□ -1.56
SNX13-209ENST00000492626 BMP2KQ9NSY1 1161 aaPredicted RBP5.29□□□□□ -1.56
SNX13-209ENST00000492626 TRPC6Q9Y210 931 aa5.28□□□□□ -1.56
SNX13-209ENST00000492626 APBB1O00213 710 aa5.28□□□□□ -1.56
SNX13-209ENST00000492626 SEC24BO95487 1268 aa5.28□□□□□ -1.56
SNX13-209ENST00000492626 AMHR2Q16671 573 aa5.28□□□□□ -1.56
SNX13-209ENST00000492626 ADGRL1O94910 1474 aa5.28□□□□□ -1.56
SNX13-209ENST00000492626 ZNF608Q9ULD9 1512 aaPredicted RBP5.27□□□□□ -1.57
SNX13-209ENST00000492626 CFTRP13569 1480 aa5.27□□□□□ -1.57
SNX13-209ENST00000492626 FANCD2Q9BXW9 1451 aa5.27□□□□□ -1.57
SNX13-209ENST00000492626 CLCN1P35523 988 aa5.27□□□□□ -1.57
SNX13-209ENST00000492626 ZBTB7CA1YPR0 619 aa5.27□□□□□ -1.57
SNX13-209ENST00000492626 TARBP1Q13395 1621 aaKnown RBP5.27□□□□□ -1.57
SNX13-209ENST00000492626 PARP9Q8IXQ6 854 aa5.27□□□□□ -1.57
SNX13-209ENST00000492626 DPY19L2Q6NUT2 758 aa5.26□□□□□ -1.57
SNX13-209ENST00000492626 PDIA4P13667 645 aaKnown RBP5.26□□□□□ -1.57
SNX13-209ENST00000492626 IER5LQ5T953 404 aa5.26□□□□□ -1.57
SNX13-209ENST00000492626 WWC1Q8IX03 1113 aa5.26□□□□□ -1.57
SNX13-209ENST00000492626 SYNJ2O15056 1496 aa5.26□□□□□ -1.57
SNX13-209ENST00000492626 DNMBPQ6XZF7 1577 aa5.26□□□□□ -1.57
SNX13-209ENST00000492626 CCDC97Q96F63 343 aaPredicted RBP5.25□□□□□ -1.57
SNX13-209ENST00000492626 MAP3K7O43318 606 aa5.25□□□□□ -1.57
SNX13-209ENST00000492626 C3orf67Q6ZVT6 689 aa5.25□□□□□ -1.57
SNX13-209ENST00000492626 GOPCQ9HD26 462 aa5.25□□□□□ -1.57
SNX13-209ENST00000492626 GAPVD1Q14C86 1478 aa5.25□□□□□ -1.57
SNX13-209ENST00000492626 C19orf67A6NJJ6 358 aa5.24□□□□□ -1.57
SNX13-209ENST00000492626 EVI5O60447 810 aa5.24□□□□□ -1.57
SNX13-209ENST00000492626 GIGYF2Q6Y7W6 1299 aaKnown RBP5.24□□□□□ -1.57
SNX13-209ENST00000492626 URB2Q14146 1524 aaKnown RBP5.24□□□□□ -1.57
SNX13-209ENST00000492626 HAX1O00165 279 aa5.24□□□□□ -1.57
SNX13-209ENST00000492626 EPAS1Q99814 870 aa5.23□□□□□ -1.57
SNX13-209ENST00000492626 PRM3Q9NNZ6 103 aa5.23□□□□□ -1.57
SNX13-209ENST00000492626 KDM4FA0A1W2PPD8 638 aa5.23□□□□□ -1.57
SNX13-209ENST00000492626 OSBPP22059 807 aa5.22□□□□□ -1.57
SNX13-209ENST00000492626 DIXDC1Q155Q3 683 aa5.22□□□□□ -1.57
SNX13-209ENST00000492626 TEX14Q8IWB6 1497 aa5.22□□□□□ -1.57
SNX13-209ENST00000492626 GPR37O15354 613 aa5.22□□□□□ -1.57
SNX13-209ENST00000492626 PTGER2P43116 358 aa5.22□□□□□ -1.57
SNX13-209ENST00000492626 OXER1Q8TDS5 423 aa5.22□□□□□ -1.57
SNX13-209ENST00000492626 GPCPD1Q9NPB8 672 aa5.22□□□□□ -1.57
SNX13-209ENST00000492626 MDM2Q00987 491 aaPredicted RBP5.22□□□□□ -1.57
SNX13-209ENST00000492626 ARID3CA6NKF2 412 aa5.21□□□□□ -1.58
SNX13-209ENST00000492626 GALR2O43603 387 aaPredicted RBP5.21□□□□□ -1.58
SNX13-209ENST00000492626 PBRM1Q86U86 1689 aa5.21□□□□□ -1.58
SNX13-209ENST00000492626 PLEKHG3A1L390 1219 aa5.21□□□□□ -1.58
SNX13-209ENST00000492626 SH3D19Q5HYK7 790 aa5.21□□□□□ -1.58
SNX13-209ENST00000492626 ADAMTSL3P82987 1691 aa5.21□□□□□ -1.58
SNX13-209ENST00000492626 A6NJR5 290 aa5.2□□□□□ -1.58
SNX13-209ENST00000492626 PDCD7Q8N8D1 485 aaKnown RBP5.2□□□□□ -1.58
SNX13-209ENST00000492626 RBM33Q96EV2 1170 aaKnown RBP5.2□□□□□ -1.58
SNX13-209ENST00000492626 OATP04181 439 aa5.2□□□□□ -1.58
SNX13-209ENST00000492626 DCBLD2Q96PD2 775 aa5.2□□□□□ -1.58
SNX13-209ENST00000492626 PCF11O94913 1555 aaKnown RBP5.2□□□□□ -1.58
SNX13-209ENST00000492626 PTGDRQ13258 359 aa5.2□□□□□ -1.58
SNX13-209ENST00000492626 ATN1P54259 1190 aaPredicted RBP5.19□□□□□ -1.58
SNX13-209ENST00000492626 CCDC9Q9Y3X0 531 aaKnown RBP5.19□□□□□ -1.58
SNX13-209ENST00000492626 SSTR3P32745 418 aaPredicted RBP5.19□□□□□ -1.58
SNX13-209ENST00000492626 CYB5RLQ6IPT4 315 aa5.19□□□□□ -1.58
SNX13-209ENST00000492626 TYW1BQ6NUM6 668 aa5.19□□□□□ -1.58
SNX13-209ENST00000492626 TMEM121BQ9BXQ6 578 aaPredicted RBP5.19□□□□□ -1.58
SNX13-209ENST00000492626 IRX5P78411 483 aaPredicted RBP5.18□□□□□ -1.58
SNX13-209ENST00000492626 SKIV2LQ15477 1246 aaKnown RBP5.18□□□□□ -1.58
SNX13-209ENST00000492626 CERKQ8TCT0 537 aa5.18□□□□□ -1.58
SNX13-209ENST00000492626 FBXW7Q969H0 707 aa5.18□□□□□ -1.58
SNX13-209ENST00000492626 BEGAINQ9BUH8 593 aa5.18□□□□□ -1.58
SNX13-209ENST00000492626 DISP3Q9P2K9 1392 aa5.18□□□□□ -1.58
SNX13-209ENST00000492626 PHF14O94880 888 aa5.18□□□□□ -1.58
SNX13-209ENST00000492626 FECHP22830 423 aa5.18□□□□□ -1.58
SNX13-209ENST00000492626 SNAPC4Q5SXM2 1469 aa5.18□□□□□ -1.58
SNX13-209ENST00000492626 PPRC1Q5VV67 1664 aaKnown RBP5.18□□□□□ -1.58
SNX13-209ENST00000492626 TRAK2O60296 914 aa5.17□□□□□ -1.58
SNX13-209ENST00000492626 SLAIN1Q8ND83 568 aa5.17□□□□□ -1.58
SNX13-209ENST00000492626 SERPINA10Q9UK55 444 aa5.17□□□□□ -1.58
SNX13-209ENST00000492626 KIF3CO14782 793 aa5.17□□□□□ -1.58
SNX13-209ENST00000492626 POLR3EQ9NVU0 708 aa5.17□□□□□ -1.58
SNX13-209ENST00000492626 EN1Q05925 392 aaPredicted RBP5.16□□□□□ -1.58
SNX13-209ENST00000492626 PROSER2Q86WR7 435 aaPredicted RBP5.16□□□□□ -1.58
SNX13-209ENST00000492626 CCDC82Q8N4S0 544 aa5.16□□□□□ -1.58
SNX13-209ENST00000492626 MAP3K4Q9Y6R4 1608 aa5.16□□□□□ -1.58
SNX13-209ENST00000492626 ATMINO43313 823 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms