RNA–Protein interactions for RNA: ENST00000492331.1

MCF2L2-213, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 661 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-213ENST00000492331 DAPK1P53355 1430 aa15□□□□□ -0.01
MCF2L2-213ENST00000492331 PTPRKQ15262 1439 aa15□□□□□ -0.01
MCF2L2-213ENST00000492331 TCOF1Q13428 1488 aaKnown RBP15□□□□□ -0.01
MCF2L2-213ENST00000492331 CROCC2H7BZ55 1655 aa15□□□□□ -0.01
MCF2L2-213ENST00000492331 DNMT1P26358 1616 aaKnown RBP14.99□□□□□ -0.01
MCF2L2-213ENST00000492331 KIF15Q9NS87 1388 aa14.99□□□□□ -0.01
MCF2L2-213ENST00000492331 KDM5DQ9BY66 1539 aa14.99□□□□□ -0.01
MCF2L2-213ENST00000492331 FBXO31Q5XUX0 539 aaPredicted RBP14.99□□□□□ -0.01
MCF2L2-213ENST00000492331 DUOX2Q9NRD8 1548 aa14.98□□□□□ -0.01
MCF2L2-213ENST00000492331 SHANK2Q9UPX8 1470 aa14.98□□□□□ -0.01
MCF2L2-213ENST00000492331 STRCQ7RTU9 1775 aa14.98□□□□□ -0.01
MCF2L2-213ENST00000492331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.97□□□□□ -0.01
MCF2L2-213ENST00000492331 MYO3AQ8NEV4 1616 aa14.96□□□□□ -0.01
MCF2L2-213ENST00000492331 EIF2AK4Q9P2K8 1649 aaKnown RBP14.96□□□□□ -0.01
MCF2L2-213ENST00000492331 FAM135AQ9P2D6 1515 aa14.96□□□□□ -0.02
MCF2L2-213ENST00000492331 ANKRD30AQ9BXX3 1397 aa14.96□□□□□ -0.02
MCF2L2-213ENST00000492331 RNF17Q9BXT8 1623 aaKnown RBP14.95□□□□□ -0.02
MCF2L2-213ENST00000492331 TNRQ92752 1358 aa14.95□□□□□ -0.02
MCF2L2-213ENST00000492331 CAMSAP1Q5T5Y3 1602 aa14.95□□□□□ -0.02
MCF2L2-213ENST00000492331 PZPP20742 1482 aa14.94□□□□□ -0.02
MCF2L2-213ENST00000492331 CEP170BQ9Y4F5 1589 aaPredicted RBP14.94□□□□□ -0.02
MCF2L2-213ENST00000492331 NCKAP5LQ9HCH0 1330 aa14.93□□□□□ -0.02
MCF2L2-213ENST00000492331 NCOA1Q15788 1441 aa14.92□□□□□ -0.02
MCF2L2-213ENST00000492331 ERBINQ96RT1 1412 aa14.92□□□□□ -0.02
MCF2L2-213ENST00000492331 ABCC3O15438 1527 aa14.92□□□□□ -0.02
MCF2L2-213ENST00000492331 ZNF142P52746 1687 aaPredicted RBP14.91□□□□□ -0.02
MCF2L2-213ENST00000492331 ZC3H13Q5T200 1668 aaKnown RBP14.91□□□□□ -0.02
MCF2L2-213ENST00000492331 A2ML1A8K2U0 1454 aa14.91□□□□□ -0.02
MCF2L2-213ENST00000492331 KANK1Q14678 1352 aa14.91□□□□□ -0.02
MCF2L2-213ENST00000492331 ITGAEP38570 1179 aa14.91□□□□□ -0.02
MCF2L2-213ENST00000492331 CERKQ8TCT0 537 aa14.91□□□□□ -0.02
MCF2L2-213ENST00000492331 FBXO41Q8TF61 875 aa14.91□□□□□ -0.02
MCF2L2-213ENST00000492331 CEP152O94986 1710 aa14.91□□□□□ -0.02
MCF2L2-213ENST00000492331 MROH1Q8NDA8 1641 aa14.9□□□□□ -0.02
MCF2L2-213ENST00000492331 PTPRTO14522 1441 aa14.9□□□□□ -0.02
MCF2L2-213ENST00000492331 CFAP65Q6ZU64 1925 aaKnown RBP14.9□□□□□ -0.02
MCF2L2-213ENST00000492331 PKD2Q13563 968 aa14.89□□□□□ -0.03
MCF2L2-213ENST00000492331 THEMISQ8N1K5 641 aaPredicted RBP14.87□□□□□ -0.03
MCF2L2-213ENST00000492331 ADGRL2O95490 1459 aa14.86□□□□□ -0.03
MCF2L2-213ENST00000492331 PLA2R1Q13018 1463 aa14.86□□□□□ -0.03
MCF2L2-213ENST00000492331 PRDM15P57071 1507 aaPredicted RBP14.86□□□□□ -0.03
MCF2L2-213ENST00000492331 NLRP1Q9C000 1473 aa14.85□□□□□ -0.03
MCF2L2-213ENST00000492331 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.85□□□□□ -0.03
MCF2L2-213ENST00000492331 ERVK-7P63135 1459 aa14.84□□□□□ -0.03
MCF2L2-213ENST00000492331 ANKLE2Q86XL3 938 aa14.84□□□□□ -0.03
MCF2L2-213ENST00000492331 UGGT1Q9NYU2 1555 aa14.84□□□□□ -0.03
MCF2L2-213ENST00000492331 DEPDC5O75140 1603 aa14.84□□□□□ -0.03
MCF2L2-213ENST00000492331 ANKRD50Q9ULJ7 1429 aa14.83□□□□□ -0.03
MCF2L2-213ENST00000492331 SPATA31D1Q6ZQQ2 1576 aa14.83□□□□□ -0.04
MCF2L2-213ENST00000492331 ARHGAP31Q2M1Z3 1444 aa14.81□□□□□ -0.04
MCF2L2-213ENST00000492331 STAG3Q9UJ98 1225 aa14.8□□□□□ -0.04
MCF2L2-213ENST00000492331 ZNF335Q9H4Z2 1342 aaPredicted RBP14.8□□□□□ -0.04
MCF2L2-213ENST00000492331 POLR1AO95602 1720 aaPredicted RBP14.79□□□□□ -0.04
MCF2L2-213ENST00000492331 ROCK1Q13464 1354 aa14.78□□□□□ -0.04
MCF2L2-213ENST00000492331 LTBP4Q8N2S1 1624 aa14.77□□□□□ -0.05
MCF2L2-213ENST00000492331 VWDEQ8N2E2 1590 aa14.77□□□□□ -0.05
MCF2L2-213ENST00000492331 LMTK2Q8IWU2 1503 aa14.76□□□□□ -0.05
MCF2L2-213ENST00000492331 UBR1Q8IWV7 1749 aa14.75□□□□□ -0.05
MCF2L2-213ENST00000492331 NEURL4Q96JN8 1562 aa14.74□□□□□ -0.05
MCF2L2-213ENST00000492331 IDI1Q13907 227 aa14.74□□□□□ -0.05
MCF2L2-213ENST00000492331 EFCAB6Q5THR3 1501 aa14.74□□□□□ -0.05
MCF2L2-213ENST00000492331 NPHP4O75161 1426 aaPredicted RBP14.74□□□□□ -0.05
MCF2L2-213ENST00000492331 TXNDC2Q86VQ3 553 aa14.73□□□□□ -0.05
MCF2L2-213ENST00000492331 EID1Q9Y6B2 187 aa14.73□□□□□ -0.05
MCF2L2-213ENST00000492331 RRBP1Q9P2E9 1410 aaKnown RBP14.73□□□□□ -0.05
MCF2L2-213ENST00000492331 PIK3C2BO00750 1634 aa14.73□□□□□ -0.05
MCF2L2-213ENST00000492331 UNC13BO14795 1591 aa14.72□□□□□ -0.05
MCF2L2-213ENST00000492331 NUP155O75694 1391 aa14.72□□□□□ -0.05
MCF2L2-213ENST00000492331 TET3O43151 1660 aa14.71□□□□□ -0.06
MCF2L2-213ENST00000492331 MED14O60244 1454 aa14.7□□□□□ -0.06
MCF2L2-213ENST00000492331 SYNMO15061 1565 aa14.7□□□□□ -0.06
MCF2L2-213ENST00000492331 LTKP29376 864 aa14.7□□□□□ -0.06
MCF2L2-213ENST00000492331 SLC52A1Q9NWF4 448 aa14.7□□□□□ -0.06
MCF2L2-213ENST00000492331 IQGAP1P46940 1657 aa14.7□□□□□ -0.06
MCF2L2-213ENST00000492331 SCAF11Q99590 1463 aaKnown RBP14.69□□□□□ -0.06
MCF2L2-213ENST00000492331 NOS1P29475 1434 aa14.69□□□□□ -0.06
MCF2L2-213ENST00000492331 GCC2Q8IWJ2 1684 aa14.69□□□□□ -0.06
MCF2L2-213ENST00000492331 CHGAP10645 457 aaKnown RBP14.69□□□□□ -0.06
MCF2L2-213ENST00000492331 RPRD2Q5VT52 1461 aaKnown RBP14.69□□□□□ -0.06
MCF2L2-213ENST00000492331 UBAP1LF5GYI3 381 aa14.68□□□□□ -0.06
MCF2L2-213ENST00000492331 IQSEC2Q5JU85 1478 aa14.68□□□□□ -0.06
MCF2L2-213ENST00000492331 BCANQ96GW7 911 aa14.67□□□□□ -0.06
MCF2L2-213ENST00000492331 TMEM2Q9UHN6 1383 aa14.67□□□□□ -0.06
MCF2L2-213ENST00000492331 SLIT1O75093 1534 aa14.66□□□□□ -0.06
MCF2L2-213ENST00000492331 IQGAP3Q86VI3 1631 aa14.66□□□□□ -0.06
MCF2L2-213ENST00000492331 ARHGAP23Q9P227 1491 aa14.66□□□□□ -0.06
MCF2L2-213ENST00000492331 SENP3Q9H4L4 574 aaPredicted RBP14.66□□□□□ -0.06
MCF2L2-213ENST00000492331 E9PCH4 1651 aa14.65□□□□□ -0.06
MCF2L2-213ENST00000492331 CPS1P31327 1500 aa14.65□□□□□ -0.06
MCF2L2-213ENST00000492331 KDM5AP29375 1690 aaKnown RBP14.65□□□□□ -0.06
MCF2L2-213ENST00000492331 TRIM52Q96A61 297 aa14.64□□□□□ -0.07
MCF2L2-213ENST00000492331 ADGRB3O60242 1522 aa14.64□□□□□ -0.07
MCF2L2-213ENST00000492331 SCAF1Q9H7N4 1312 aaKnown RBP14.64□□□□□ -0.07
MCF2L2-213ENST00000492331 PPP1R15AO75807 674 aaPredicted RBP14.63□□□□□ -0.07
MCF2L2-213ENST00000492331 NAIPQ13075 1403 aa14.63□□□□□ -0.07
MCF2L2-213ENST00000492331 HDGFP51858 240 aaKnown RBP14.62□□□□□ -0.07
MCF2L2-213ENST00000492331 SLC26A8Q96RN1 970 aa14.62□□□□□ -0.07
MCF2L2-213ENST00000492331 MYO5BQ9ULV0 1848 aa14.61□□□□□ -0.07
MCF2L2-213ENST00000492331 TOM1O60784 492 aa14.6□□□□□ -0.07
MCF2L2-213ENST00000492331 PIP4K2BP78356 416 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms