RNA–Protein interactions for RNA: ENST00000492136.1

UBP1-212, Transcript of upstream binding protein 1, humanhuman

TSL 2

Gene UBP1, Length 7,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-212ENST00000492136 HSP90AA2PQ14568 343 aaPredicted RBP8.48□□□□□ -1.05
UBP1-212ENST00000492136 RBM19Q9Y4C8 960 aaKnown RBP8.47□□□□□ -1.05
UBP1-212ENST00000492136 RFX1P22670 979 aa8.47□□□□□ -1.05
UBP1-212ENST00000492136 ITPRIPQ8IWB1 547 aa8.47□□□□□ -1.05
UBP1-212ENST00000492136 USP35Q9P2H5 1018 aa8.47□□□□□ -1.05
UBP1-212ENST00000492136 FYB1O15117 783 aa8.46□□□□□ -1.05
UBP1-212ENST00000492136 BCL11BQ9C0K0 894 aaPredicted RBP8.46□□□□□ -1.05
UBP1-212ENST00000492136 FOXD4L6Q3SYB3 417 aaPredicted RBP8.46□□□□□ -1.05
UBP1-212ENST00000492136 FOXD4L3Q6VB84 417 aaPredicted RBP8.46□□□□□ -1.05
UBP1-212ENST00000492136 ZMYND15Q9H091 742 aa8.46□□□□□ -1.05
UBP1-212ENST00000492136 ATXN8OSP0DMR3 200 aa8.46□□□□□ -1.06
UBP1-212ENST00000492136 CCDC43Q96MW1 224 aaKnown RBP8.46□□□□□ -1.06
UBP1-212ENST00000492136 ZCCHC6Q5VYS8 1495 aaKnown RBP8.46□□□□□ -1.06
UBP1-212ENST00000492136 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.45□□□□□ -1.06
UBP1-212ENST00000492136 CALD1Q05682 793 aaKnown RBP8.45□□□□□ -1.06
UBP1-212ENST00000492136 PSMD1Q99460 953 aa8.45□□□□□ -1.06
UBP1-212ENST00000492136 WWC2Q6AWC2 1192 aa8.45□□□□□ -1.06
UBP1-212ENST00000492136 ZNF592Q92610 1267 aa8.45□□□□□ -1.06
UBP1-212ENST00000492136 GPATCH3Q96I76 525 aa8.45□□□□□ -1.06
UBP1-212ENST00000492136 CSPP1Q1MSJ5 1256 aa8.44□□□□□ -1.06
UBP1-212ENST00000492136 TTLL12Q14166 644 aaPredicted RBP8.44□□□□□ -1.06
UBP1-212ENST00000492136 ZFYVE27Q5T4F4 411 aa8.44□□□□□ -1.06
UBP1-212ENST00000492136 EP400NLQ6ZTU2 488 aa8.44□□□□□ -1.06
UBP1-212ENST00000492136 IKQ13123 557 aaPredicted RBP8.44□□□□□ -1.06
UBP1-212ENST00000492136 TSR1Q2NL82 804 aaKnown RBP8.43□□□□□ -1.06
UBP1-212ENST00000492136 FAM177BA6PVY3 158 aa8.43□□□□□ -1.06
UBP1-212ENST00000492136 PHF14O94880 888 aa8.43□□□□□ -1.06
UBP1-212ENST00000492136 WWC3Q9ULE0 1092 aa8.43□□□□□ -1.06
UBP1-212ENST00000492136 R3HCC1Q9Y3T6 440 aaKnown RBP8.43□□□□□ -1.06
UBP1-212ENST00000492136 SF3A1Q15459 793 aaKnown RBP8.42□□□□□ -1.06
UBP1-212ENST00000492136 KDM4AO75164 1064 aa8.42□□□□□ -1.06
UBP1-212ENST00000492136 NUTM2DQ5VT03 806 aaPredicted RBP8.42□□□□□ -1.06
UBP1-212ENST00000492136 MORC1Q86VD1 984 aa8.42□□□□□ -1.06
UBP1-212ENST00000492136 TIMELESSQ9UNS1 1208 aa8.42□□□□□ -1.06
UBP1-212ENST00000492136 E9PSI1 815 aa8.42□□□□□ -1.06
UBP1-212ENST00000492136 CCDC34Q96HJ3 373 aa8.42□□□□□ -1.06
UBP1-212ENST00000492136 CRBNQ96SW2 442 aa8.42□□□□□ -1.06
UBP1-212ENST00000492136 PCMTD1Q96MG8 357 aaPredicted RBP8.41□□□□□ -1.06
UBP1-212ENST00000492136 H3BQV1 296 aa8.41□□□□□ -1.06
UBP1-212ENST00000492136 IFFO2Q5TF58 517 aa8.41□□□□□ -1.06
UBP1-212ENST00000492136 VPS37DQ86XT2 251 aa8.41□□□□□ -1.06
UBP1-212ENST00000492136 SIN3AQ96ST3 1273 aa8.41□□□□□ -1.06
UBP1-212ENST00000492136 NOL10Q9BSC4 688 aaKnown RBP8.41□□□□□ -1.06
UBP1-212ENST00000492136 SLC4A10Q6U841 1118 aa8.4□□□□□ -1.06
UBP1-212ENST00000492136 GOLGA6L19H0YKK7 550 aa8.4□□□□□ -1.06
UBP1-212ENST00000492136 CCDC70Q6NSX1 233 aa8.4□□□□□ -1.06
UBP1-212ENST00000492136 CIZ1Q9ULV3 898 aaPredicted RBP8.4□□□□□ -1.06
UBP1-212ENST00000492136 TCERG1O14776 1098 aaKnown RBP8.4□□□□□ -1.06
UBP1-212ENST00000492136 TMF1P82094 1093 aa8.4□□□□□ -1.06
UBP1-212ENST00000492136 KIF16BQ96L93 1317 aa8.4□□□□□ -1.07
UBP1-212ENST00000492136 TPM2P07951 284 aa8.4□□□□□ -1.07
UBP1-212ENST00000492136 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.39□□□□□ -1.07
UBP1-212ENST00000492136 RSF1Q96T23 1441 aaPredicted RBP8.39□□□□□ -1.07
UBP1-212ENST00000492136 DCAF11Q8TEB1 546 aa8.39□□□□□ -1.07
UBP1-212ENST00000492136 IPO8O15397 1037 aaKnown RBP8.38□□□□□ -1.07
UBP1-212ENST00000492136 GPS2Q13227 327 aa8.38□□□□□ -1.07
UBP1-212ENST00000492136 APPP05067 770 aa8.38□□□□□ -1.07
UBP1-212ENST00000492136 RBM33Q96EV2 1170 aaKnown RBP8.38□□□□□ -1.07
UBP1-212ENST00000492136 MAP7D2Q96T17 732 aa8.38□□□□□ -1.07
UBP1-212ENST00000492136 CLIP1P30622 1438 aa8.37□□□□□ -1.07
UBP1-212ENST00000492136 PLEKHD1A6NEE1 506 aa8.37□□□□□ -1.07
UBP1-212ENST00000492136 RBM5P52756 815 aaKnown RBP eCLIP8.37□□□□□ -1.07
UBP1-212ENST00000492136 ODF2Q5BJF6 829 aa8.37□□□□□ -1.07
UBP1-212ENST00000492136 TPM1P09493 284 aa8.36□□□□□ -1.07
UBP1-212ENST00000492136 MCTP1Q6DN14 999 aa8.36□□□□□ -1.07
UBP1-212ENST00000492136 FAM184AQ8NB25 1140 aa8.36□□□□□ -1.07
UBP1-212ENST00000492136 RILPL2Q969X0 211 aa8.36□□□□□ -1.07
UBP1-212ENST00000492136 RWDD1Q9H446 243 aaPredicted RBP8.36□□□□□ -1.07
UBP1-212ENST00000492136 SKIDA1Q1XH10 827 aa8.36□□□□□ -1.07
UBP1-212ENST00000492136 TEX35Q5T0J7 233 aa8.36□□□□□ -1.07
UBP1-212ENST00000492136 PMFBP1Q8TBY8 1022 aa8.36□□□□□ -1.07
UBP1-212ENST00000492136 RCAN3Q9UKA8 241 aa8.36□□□□□ -1.07
UBP1-212ENST00000492136 CFDP1Q9UEE9 299 aaPredicted RBP8.36□□□□□ -1.07
UBP1-212ENST00000492136 UQCRHP07919 91 aa8.36□□□□□ -1.07
UBP1-212ENST00000492136 DHX37Q8IY37 1157 aaKnown RBP8.36□□□□□ -1.07
UBP1-212ENST00000492136 ZNF428Q96B54 188 aa8.35□□□□□ -1.07
UBP1-212ENST00000492136 SMC4Q9NTJ3 1288 aa8.35□□□□□ -1.07
UBP1-212ENST00000492136 CCDC146Q8IYE0 955 aa8.35□□□□□ -1.07
UBP1-212ENST00000492136 ZNF219Q9P2Y4 722 aaPredicted RBP8.35□□□□□ -1.07
UBP1-212ENST00000492136 ATP2B2Q01814 1243 aa8.35□□□□□ -1.07
UBP1-212ENST00000492136 UQCRHLA0A096LP55 91 aa8.35□□□□□ -1.07
UBP1-212ENST00000492136 ST18O60284 1047 aa8.35□□□□□ -1.07
UBP1-212ENST00000492136 NAP1L1P55209 391 aaKnown RBP8.35□□□□□ -1.07
UBP1-212ENST00000492136 PLCD4Q9BRC7 762 aa8.35□□□□□ -1.07
UBP1-212ENST00000492136 FOSBP53539 338 aa8.34□□□□□ -1.07
UBP1-212ENST00000492136 VTI1AQ96AJ9 217 aa8.34□□□□□ -1.07
UBP1-212ENST00000492136 KAT6BQ8WYB5 2073 aa8.34□□□□□ -1.07
UBP1-212ENST00000492136 BECN2A8MW95 431 aa8.34□□□□□ -1.07
UBP1-212ENST00000492136 CHMP4CQ96CF2 233 aa8.34□□□□□ -1.07
UBP1-212ENST00000492136 AKAP17AQ02040 695 aaKnown RBP8.34□□□□□ -1.07
UBP1-212ENST00000492136 RUFY1Q96T51 708 aa8.34□□□□□ -1.07
UBP1-212ENST00000492136 SPAG9O60271 1321 aaKnown RBP8.34□□□□□ -1.07
UBP1-212ENST00000492136 EIF4G1Q04637 1599 aaKnown RBP8.34□□□□□ -1.07
UBP1-212ENST00000492136 U2AF1L5P0DN76 240 aaPredicted RBP8.34□□□□□ -1.07
UBP1-212ENST00000492136 U2AF1Q01081 240 aaKnown RBP eCLIP8.34□□□□□ -1.07
UBP1-212ENST00000492136 HOMER1Q86YM7 354 aa8.34□□□□□ -1.07
UBP1-212ENST00000492136 IL27Q8NEV9 243 aa8.34□□□□□ -1.07
UBP1-212ENST00000492136 FAM13BQ9NYF5 915 aa8.33□□□□□ -1.08
UBP1-212ENST00000492136 RSPH6AQ9H0K4 717 aa8.33□□□□□ -1.08
UBP1-212ENST00000492136 GGT6Q6P531 493 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms