RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 FAM135AQ9P2D6 1515 aa23.36■■□□□ 1.33
TOM1-215ENST00000491987 SHANK2Q9UPX8 1470 aa23.36■■□□□ 1.33
TOM1-215ENST00000491987 DAPK1P53355 1430 aa23.34■■□□□ 1.33
TOM1-215ENST00000491987 DNMT1P26358 1616 aaKnown RBP23.34■■□□□ 1.33
TOM1-215ENST00000491987 WASHC2CQ9Y4E1 1318 aa23.33■■□□□ 1.33
TOM1-215ENST00000491987 RNF17Q9BXT8 1623 aaKnown RBP23.33■■□□□ 1.33
TOM1-215ENST00000491987 EIF2AK4Q9P2K8 1649 aaKnown RBP23.33■■□□□ 1.33
TOM1-215ENST00000491987 DUOX2Q9NRD8 1548 aa23.33■■□□□ 1.32
TOM1-215ENST00000491987 ZNF142P52746 1687 aaPredicted RBP23.32■■□□□ 1.32
TOM1-215ENST00000491987 CEP170BQ9Y4F5 1589 aaPredicted RBP23.31■■□□□ 1.32
TOM1-215ENST00000491987 CAMSAP1Q5T5Y3 1602 aa23.3■■□□□ 1.32
TOM1-215ENST00000491987 KIF15Q9NS87 1388 aa23.3■■□□□ 1.32
TOM1-215ENST00000491987 NCOA1Q15788 1441 aa23.29■■□□□ 1.32
TOM1-215ENST00000491987 DMRT2Q9Y5R5 561 aa23.29■■□□□ 1.32
TOM1-215ENST00000491987 PZPP20742 1482 aa23.29■■□□□ 1.32
TOM1-215ENST00000491987 MROH1Q8NDA8 1641 aa23.28■■□□□ 1.32
TOM1-215ENST00000491987 FBXO31Q5XUX0 539 aaPredicted RBP23.27■■□□□ 1.32
TOM1-215ENST00000491987 RRP7BPQ9NSQ0 103 aa23.27■■□□□ 1.32
TOM1-215ENST00000491987 ABCC3O15438 1527 aa23.27■■□□□ 1.32
TOM1-215ENST00000491987 ZC3H13Q5T200 1668 aaKnown RBP23.26■■□□□ 1.31
TOM1-215ENST00000491987 TNRQ92752 1358 aa23.26■■□□□ 1.31
TOM1-215ENST00000491987 PTPRTO14522 1441 aa23.25■■□□□ 1.31
TOM1-215ENST00000491987 ERBINQ96RT1 1412 aa23.25■■□□□ 1.31
TOM1-215ENST00000491987 FAM50AQ14320 339 aaKnown RBP23.24■■□□□ 1.31
TOM1-215ENST00000491987 FBXO41Q8TF61 875 aa23.24■■□□□ 1.31
TOM1-215ENST00000491987 CHIC2Q9UKJ5 165 aa23.24■■□□□ 1.31
TOM1-215ENST00000491987 A2ML1A8K2U0 1454 aa23.23■■□□□ 1.31
TOM1-215ENST00000491987 CEP152O94986 1710 aa23.22■■□□□ 1.31
TOM1-215ENST00000491987 ANKRD30AQ9BXX3 1397 aa23.21■■□□□ 1.31
TOM1-215ENST00000491987 PLA2R1Q13018 1463 aa23.2■■□□□ 1.3
TOM1-215ENST00000491987 NCKAP5LQ9HCH0 1330 aa23.2■■□□□ 1.3
TOM1-215ENST00000491987 PRDM15P57071 1507 aaPredicted RBP23.19■■□□□ 1.3
TOM1-215ENST00000491987 CERKQ8TCT0 537 aa23.19■■□□□ 1.3
TOM1-215ENST00000491987 DEPDC5O75140 1603 aa23.16■■□□□ 1.3
TOM1-215ENST00000491987 ADGRL2O95490 1459 aa23.16■■□□□ 1.3
TOM1-215ENST00000491987 SPATA31D1Q6ZQQ2 1576 aa23.15■■□□□ 1.3
TOM1-215ENST00000491987 PPARGC1BQ86YN6 1023 aaKnown RBP23.15■■□□□ 1.3
TOM1-215ENST00000491987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.15■■□□□ 1.3
TOM1-215ENST00000491987 ERVK-7P63135 1459 aa23.14■■□□□ 1.29
TOM1-215ENST00000491987 NLRP1Q9C000 1473 aa23.14■■□□□ 1.29
TOM1-215ENST00000491987 PKD2Q13563 968 aa23.13■■□□□ 1.29
TOM1-215ENST00000491987 UGGT1Q9NYU2 1555 aa23.1■■□□□ 1.29
TOM1-215ENST00000491987 KANK1Q14678 1352 aa23.1■■□□□ 1.29
TOM1-215ENST00000491987 LTBP4Q8N2S1 1624 aa23.08■■□□□ 1.29
TOM1-215ENST00000491987 POLR1AO95602 1720 aaPredicted RBP23.08■■□□□ 1.28
TOM1-215ENST00000491987 ARHGAP31Q2M1Z3 1444 aa23.08■■□□□ 1.28
TOM1-215ENST00000491987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.07■■□□□ 1.28
TOM1-215ENST00000491987 VWDEQ8N2E2 1590 aa23.06■■□□□ 1.28
TOM1-215ENST00000491987 THEMISQ8N1K5 641 aaPredicted RBP23.05■■□□□ 1.28
TOM1-215ENST00000491987 ANKRD50Q9ULJ7 1429 aa23.05■■□□□ 1.28
TOM1-215ENST00000491987 NEURL4Q96JN8 1562 aa23.05■■□□□ 1.28
TOM1-215ENST00000491987 LMTK2Q8IWU2 1503 aa23.04■■□□□ 1.28
TOM1-215ENST00000491987 CFAP65Q6ZU64 1925 aaKnown RBP23.04■■□□□ 1.28
TOM1-215ENST00000491987 ZNF335Q9H4Z2 1342 aaPredicted RBP23.03■■□□□ 1.28
TOM1-215ENST00000491987 ITGAEP38570 1179 aa23■■□□□ 1.27
TOM1-215ENST00000491987 ANKLE2Q86XL3 938 aa23■■□□□ 1.27
TOM1-215ENST00000491987 EFCAB6Q5THR3 1501 aa22.99■■□□□ 1.27
TOM1-215ENST00000491987 UBR1Q8IWV7 1749 aa22.99■■□□□ 1.27
TOM1-215ENST00000491987 ROCK1Q13464 1354 aa22.98■■□□□ 1.27
TOM1-215ENST00000491987 NPHP4O75161 1426 aaPredicted RBP22.95■■□□□ 1.26
TOM1-215ENST00000491987 IQSEC2Q5JU85 1478 aa22.95■■□□□ 1.26
TOM1-215ENST00000491987 PIK3C2BO00750 1634 aa22.94■■□□□ 1.26
TOM1-215ENST00000491987 UNC13BO14795 1591 aa22.94■■□□□ 1.26
TOM1-215ENST00000491987 MED14O60244 1454 aa22.94■■□□□ 1.26
TOM1-215ENST00000491987 SYNMO15061 1565 aa22.93■■□□□ 1.26
TOM1-215ENST00000491987 IQGAP1P46940 1657 aa22.91■■□□□ 1.26
TOM1-215ENST00000491987 NOS1P29475 1434 aa22.91■■□□□ 1.26
TOM1-215ENST00000491987 TET3O43151 1660 aa22.9■■□□□ 1.26
TOM1-215ENST00000491987 RRBP1Q9P2E9 1410 aaKnown RBP22.9■■□□□ 1.26
TOM1-215ENST00000491987 SLIT1O75093 1534 aa22.88■■□□□ 1.25
TOM1-215ENST00000491987 RPRD2Q5VT52 1461 aaKnown RBP22.88■■□□□ 1.25
TOM1-215ENST00000491987 SCAF11Q99590 1463 aaKnown RBP22.88■■□□□ 1.25
TOM1-215ENST00000491987 ARHGAP23Q9P227 1491 aa22.88■■□□□ 1.25
TOM1-215ENST00000491987 IDI1Q13907 227 aa22.87■■□□□ 1.25
TOM1-215ENST00000491987 STAG3Q9UJ98 1225 aa22.87■■□□□ 1.25
TOM1-215ENST00000491987 GCC2Q8IWJ2 1684 aa22.87■■□□□ 1.25
TOM1-215ENST00000491987 CPS1P31327 1500 aa22.85■■□□□ 1.25
TOM1-215ENST00000491987 IQGAP3Q86VI3 1631 aa22.85■■□□□ 1.25
TOM1-215ENST00000491987 KDM5AP29375 1690 aaKnown RBP22.84■■□□□ 1.25
TOM1-215ENST00000491987 ADGRB3O60242 1522 aa22.84■■□□□ 1.25
TOM1-215ENST00000491987 LTKP29376 864 aa22.84■■□□□ 1.25
TOM1-215ENST00000491987 TXNDC2Q86VQ3 553 aa22.84■■□□□ 1.25
TOM1-215ENST00000491987 TMEM2Q9UHN6 1383 aa22.83■■□□□ 1.25
TOM1-215ENST00000491987 NUP155O75694 1391 aa22.81■■□□□ 1.24
TOM1-215ENST00000491987 EID1Q9Y6B2 187 aa22.81■■□□□ 1.24
TOM1-215ENST00000491987 E9PCH4 1651 aa22.81■■□□□ 1.24
TOM1-215ENST00000491987 SLC52A1Q9NWF4 448 aa22.8■■□□□ 1.24
TOM1-215ENST00000491987 UBAP1LF5GYI3 381 aa22.79■■□□□ 1.24
TOM1-215ENST00000491987 STRCP1A6NGW2 1772 aa22.76■■□□□ 1.23
TOM1-215ENST00000491987 NAIPQ13075 1403 aa22.74■■□□□ 1.23
TOM1-215ENST00000491987 TMEM131LA2VDJ0 1609 aa22.71■■□□□ 1.23
TOM1-215ENST00000491987 MYO5BQ9ULV0 1848 aa22.71■■□□□ 1.23
TOM1-215ENST00000491987 LRRC7Q96NW7 1537 aa22.7■■□□□ 1.22
TOM1-215ENST00000491987 CHGAP10645 457 aaKnown RBP22.69■■□□□ 1.22
TOM1-215ENST00000491987 ZFYVE9O95405 1425 aa22.68■■□□□ 1.22
TOM1-215ENST00000491987 RIMS2Q9UQ26 1411 aa22.67■■□□□ 1.22
TOM1-215ENST00000491987 HFM1A2PYH4 1435 aa22.66■■□□□ 1.22
TOM1-215ENST00000491987 SLC26A8Q96RN1 970 aa22.66■■□□□ 1.22
TOM1-215ENST00000491987 SCAF1Q9H7N4 1312 aaKnown RBP22.65■■□□□ 1.22
TOM1-215ENST00000491987 TOM1O60784 492 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms