RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 ZNF644Q9H582 1327 aaPredicted RBP23.37■■□□□ 1.33
SSR4-212ENST00000491833 DHX29Q7Z478 1369 aaKnown RBP23.37■■□□□ 1.33
SSR4-212ENST00000491833 CCDC141Q6ZP82 1450 aa23.36■■□□□ 1.33
SSR4-212ENST00000491833 NEURL4Q96JN8 1562 aa23.35■■□□□ 1.33
SSR4-212ENST00000491833 TNRQ92752 1358 aa23.34■■□□□ 1.33
SSR4-212ENST00000491833 PZPP20742 1482 aa23.34■■□□□ 1.33
SSR4-212ENST00000491833 CPS1P31327 1500 aa23.33■■□□□ 1.33
SSR4-212ENST00000491833 CAMSAP2Q08AD1 1489 aa23.31■■□□□ 1.32
SSR4-212ENST00000491833 KIF3BO15066 747 aa23.28■■□□□ 1.32
SSR4-212ENST00000491833 NCOA2Q15596 1464 aa23.27■■□□□ 1.32
SSR4-212ENST00000491833 SHANK2Q9UPX8 1470 aa23.27■■□□□ 1.32
SSR4-212ENST00000491833 SCAF1Q9H7N4 1312 aaKnown RBP23.26■■□□□ 1.31
SSR4-212ENST00000491833 NLRP1Q9C000 1473 aa23.25■■□□□ 1.31
SSR4-212ENST00000491833 FBXO31Q5XUX0 539 aaPredicted RBP23.25■■□□□ 1.31
SSR4-212ENST00000491833 ARHGEF5Q12774 1597 aa23.24■■□□□ 1.31
SSR4-212ENST00000491833 MED1Q15648 1581 aaPredicted RBP23.24■■□□□ 1.31
SSR4-212ENST00000491833 UGGT1Q9NYU2 1555 aa23.24■■□□□ 1.31
SSR4-212ENST00000491833 WASHC2CQ9Y4E1 1318 aa23.24■■□□□ 1.31
SSR4-212ENST00000491833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.23■■□□□ 1.316e-8■■□□□ 11.8
SSR4-212ENST00000491833 VWDEQ8N2E2 1590 aa23.23■■□□□ 1.31
SSR4-212ENST00000491833 DEPDC5O75140 1603 aa23.22■■□□□ 1.31
SSR4-212ENST00000491833 TOM1O60784 492 aa23.22■■□□□ 1.31
SSR4-212ENST00000491833 RSPH4AQ5TD94 716 aa23.22■■□□□ 1.31
SSR4-212ENST00000491833 PIP4K2BP78356 416 aa23.21■■□□□ 1.31
SSR4-212ENST00000491833 MIA2Q96PC5 1412 aa23.21■■□□□ 1.31
SSR4-212ENST00000491833 ZC3H13Q5T200 1668 aaKnown RBP23.21■■□□□ 1.31
SSR4-212ENST00000491833 HSPA1LP34931 641 aa23.2■■□□□ 1.3
SSR4-212ENST00000491833 ANKLE2Q86XL3 938 aa23.2■■□□□ 1.3
SSR4-212ENST00000491833 RNF17Q9BXT8 1623 aaKnown RBP23.19■■□□□ 1.3
SSR4-212ENST00000491833 MED14O60244 1454 aa23.19■■□□□ 1.3
SSR4-212ENST00000491833 NPHP4O75161 1426 aaPredicted RBP23.19■■□□□ 1.3
SSR4-212ENST00000491833 THEMISQ8N1K5 641 aaPredicted RBP23.18■■□□□ 1.3
SSR4-212ENST00000491833 IQGAP1P46940 1657 aa23.18■■□□□ 1.3
SSR4-212ENST00000491833 EIF2AK4Q9P2K8 1649 aaKnown RBP23.15■■□□□ 1.3
SSR4-212ENST00000491833 MAST1Q9Y2H9 1570 aa23.14■■□□□ 1.3
SSR4-212ENST00000491833 ABCC3O15438 1527 aa23.14■■□□□ 1.3
SSR4-212ENST00000491833 TSPY4P0CV99 314 aa23.14■■□□□ 1.29
SSR4-212ENST00000491833 TSPY10P0CW01 314 aa23.14■■□□□ 1.29
SSR4-212ENST00000491833 SYNMO15061 1565 aa23.14■■□□□ 1.29
SSR4-212ENST00000491833 ALKQ9UM73 1620 aa23.12■■□□□ 1.29
SSR4-212ENST00000491833 ERVK-7P63135 1459 aa23.1■■□□□ 1.29
SSR4-212ENST00000491833 MROH1Q8NDA8 1641 aa23.08■■□□□ 1.28
SSR4-212ENST00000491833 STRCP1A6NGW2 1772 aa23.07■■□□□ 1.28
SSR4-212ENST00000491833 LRRC9Q6ZRR7 1453 aa23.07■■□□□ 1.28
SSR4-212ENST00000491833 CEP152O94986 1710 aa23.07■■□□□ 1.28
SSR4-212ENST00000491833 LRRC7Q96NW7 1537 aa23.06■■□□□ 1.28
SSR4-212ENST00000491833 UBR1Q8IWV7 1749 aa23.05■■□□□ 1.28
SSR4-212ENST00000491833 PHF23Q9BUL5 403 aaPredicted RBP23.04■■□□□ 1.28
SSR4-212ENST00000491833 VPS8Q8N3P4 1428 aa23.02■■□□□ 1.28
SSR4-212ENST00000491833 SCAF11Q99590 1463 aaKnown RBP23■■□□□ 1.27
SSR4-212ENST00000491833 DUOX2Q9NRD8 1548 aa23■■□□□ 1.27
SSR4-212ENST00000491833 PRDM15P57071 1507 aaPredicted RBP22.98■■□□□ 1.27
SSR4-212ENST00000491833 MYOM3Q5VTT5 1437 aa22.98■■□□□ 1.27
SSR4-212ENST00000491833 SLIT1O75093 1534 aa22.97■■□□□ 1.27
SSR4-212ENST00000491833 ARHGAP23Q9P227 1491 aa22.96■■□□□ 1.27
SSR4-212ENST00000491833 CROCC2H7BZ55 1655 aa22.95■■□□□ 1.26
SSR4-212ENST00000491833 MAP3K1Q13233 1512 aa22.95■■□□□ 1.26
SSR4-212ENST00000491833 SENP3Q9H4L4 574 aaPredicted RBP22.94■■□□□ 1.26
SSR4-212ENST00000491833 CFAP65Q6ZU64 1925 aaKnown RBP22.94■■□□□ 1.26
SSR4-212ENST00000491833 ARHGAP31Q2M1Z3 1444 aa22.93■■□□□ 1.26
SSR4-212ENST00000491833 ERBINQ96RT1 1412 aa22.92■■□□□ 1.26
SSR4-212ENST00000491833 KIF15Q9NS87 1388 aa22.9■■□□□ 1.26
SSR4-212ENST00000491833 PIK3C2BO00750 1634 aa22.9■■□□□ 1.26
SSR4-212ENST00000491833 XIRP1Q702N8 1843 aaKnown RBP22.89■■□□□ 1.26
SSR4-212ENST00000491833 KANK4Q5T7N3 995 aaPredicted RBP22.87■■□□□ 1.25
SSR4-212ENST00000491833 TXNDC2Q86VQ3 553 aa22.87■■□□□ 1.25
SSR4-212ENST00000491833 LTKP29376 864 aa22.86■■□□□ 1.25
SSR4-212ENST00000491833 KDM5AP29375 1690 aaKnown RBP22.85■■□□□ 1.25
SSR4-212ENST00000491833 EID1Q9Y6B2 187 aa22.85■■□□□ 1.25
SSR4-212ENST00000491833 PTPN23Q9H3S7 1636 aa22.85■■□□□ 1.25
SSR4-212ENST00000491833 TMEM2Q9UHN6 1383 aa22.83■■□□□ 1.25
SSR4-212ENST00000491833 ABCC5O15440 1437 aa22.82■■□□□ 1.24
SSR4-212ENST00000491833 EFCAB6Q5THR3 1501 aa22.82■■□□□ 1.24
SSR4-212ENST00000491833 KANK1Q14678 1352 aa22.82■■□□□ 1.24
SSR4-212ENST00000491833 DAPK1P53355 1430 aa22.81■■□□□ 1.24
SSR4-212ENST00000491833 STAG3Q9UJ98 1225 aa22.8■■□□□ 1.24
SSR4-212ENST00000491833 LMTK2Q8IWU2 1503 aa22.8■■□□□ 1.24
SSR4-212ENST00000491833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.79■■□□□ 1.24
SSR4-212ENST00000491833 RRP7BPQ9NSQ0 103 aa22.79■■□□□ 1.24
SSR4-212ENST00000491833 FAM135BQ49AJ0 1406 aa22.78■■□□□ 1.24
SSR4-212ENST00000491833 ADGRB3O60242 1522 aa22.76■■□□□ 1.23
SSR4-212ENST00000491833 TMEM94Q12767 1356 aa22.76■■□□□ 1.23
SSR4-212ENST00000491833 ROBO1Q9Y6N7 1651 aa22.74■■□□□ 1.23
SSR4-212ENST00000491833 NWD1Q149M9 1564 aa22.74■■□□□ 1.23
SSR4-212ENST00000491833 NKTRP30414 1462 aaKnown RBP22.73■■□□□ 1.23
SSR4-212ENST00000491833 RGS17Q9UGC6 210 aaPredicted RBP22.73■■□□□ 1.23
SSR4-212ENST00000491833 TET3O43151 1660 aa22.73■■□□□ 1.23
SSR4-212ENST00000491833 ANKRD30AQ9BXX3 1397 aa22.73■■□□□ 1.23
SSR4-212ENST00000491833 FGD6Q6ZV73 1430 aa22.73■■□□□ 1.23
SSR4-212ENST00000491833 LOC105371045A0A1W2PR82 267 aa22.71■■□□□ 1.23
SSR4-212ENST00000491833 KCNA6P17658 529 aa22.71■■□□□ 1.23
SSR4-212ENST00000491833 NOS1P29475 1434 aa22.7■■□□□ 1.22
SSR4-212ENST00000491833 IDI1Q13907 227 aa22.69■■□□□ 1.22
SSR4-212ENST00000491833 APLP2Q06481 763 aa22.68■■□□□ 1.22
SSR4-212ENST00000491833 SLC26A8Q96RN1 970 aa22.67■■□□□ 1.22
SSR4-212ENST00000491833 PROSER2Q86WR7 435 aaPredicted RBP22.66■■□□□ 1.22
SSR4-212ENST00000491833 CHIC2Q9UKJ5 165 aa22.65■■□□□ 1.22
SSR4-212ENST00000491833 ADGRL2O95490 1459 aa22.64■■□□□ 1.21
SSR4-212ENST00000491833 MSH6P52701 1360 aa22.63■■□□□ 1.21
SSR4-212ENST00000491833 RPRD2Q5VT52 1461 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms