RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ADGRL2O95490 1459 aa14.28□□□□□ -0.12
BRCA1-219ENST00000491747 NCOA1Q15788 1441 aa14.28□□□□□ -0.12
BRCA1-219ENST00000491747 MROH1Q8NDA8 1641 aa14.27□□□□□ -0.12
BRCA1-219ENST00000491747 RRBP1Q9P2E9 1410 aaKnown RBP14.27□□□□□ -0.12
BRCA1-219ENST00000491747 ESF1Q9H501 851 aaKnown RBP14.26□□□□□ -0.13
BRCA1-219ENST00000491747 ANKRD30AQ9BXX3 1397 aa14.26□□□□□ -0.13
BRCA1-219ENST00000491747 CNTLNQ9NXG0 1405 aa14.26□□□□□ -0.13
BRCA1-219ENST00000491747 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.26□□□□□ -0.13
BRCA1-219ENST00000491747 ZEB1P37275 1124 aaPredicted RBP14.25□□□□□ -0.13
BRCA1-219ENST00000491747 ZMYM3Q14202 1370 aa14.25□□□□□ -0.13
BRCA1-219ENST00000491747 ITGAEP38570 1179 aa14.24□□□□□ -0.13
BRCA1-219ENST00000491747 LMTK3Q96Q04 1460 aa14.24□□□□□ -0.13
BRCA1-219ENST00000491747 ERBINQ96RT1 1412 aa14.24□□□□□ -0.13
BRCA1-219ENST00000491747 PPP6R1Q9UPN7 881 aa14.24□□□□□ -0.13
BRCA1-219ENST00000491747 CEP152O94986 1710 aa14.23□□□□□ -0.13
BRCA1-219ENST00000491747 PREX1Q8TCU6 1659 aa14.23□□□□□ -0.13
BRCA1-219ENST00000491747 KDM5DQ9BY66 1539 aa14.23□□□□□ -0.13
BRCA1-219ENST00000491747 DEPDC5O75140 1603 aa14.22□□□□□ -0.13
BRCA1-219ENST00000491747 SETD1BQ9UPS6 1966 aaKnown RBP14.21□□□□□ -0.13
BRCA1-219ENST00000491747 ABCC3O15438 1527 aa14.2□□□□□ -0.14
BRCA1-219ENST00000491747 FAM135AQ9P2D6 1515 aa14.2□□□□□ -0.14
BRCA1-219ENST00000491747 WASHC2CQ9Y4E1 1318 aa14.2□□□□□ -0.14
BRCA1-219ENST00000491747 ZC3H13Q5T200 1668 aaKnown RBP14.2□□□□□ -0.14
BRCA1-219ENST00000491747 PRDM15P57071 1507 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-219ENST00000491747 ROCK1Q13464 1354 aa14.19□□□□□ -0.14
BRCA1-219ENST00000491747 ANKRD50Q9ULJ7 1429 aa14.18□□□□□ -0.14
BRCA1-219ENST00000491747 CAMSAP1Q5T5Y3 1602 aa14.18□□□□□ -0.14
BRCA1-219ENST00000491747 HSPA2P54652 639 aa14.17□□□□□ -0.14
BRCA1-219ENST00000491747 NPATQ14207 1427 aa14.17□□□□□ -0.14
BRCA1-219ENST00000491747 CFAP65Q6ZU64 1925 aaKnown RBP14.17□□□□□ -0.14
BRCA1-219ENST00000491747 FBXO31Q5XUX0 539 aaPredicted RBP14.17□□□□□ -0.14
BRCA1-219ENST00000491747 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.141e-6■■■□□ 18.6
BRCA1-219ENST00000491747 VWDEQ8N2E2 1590 aa14.16□□□□□ -0.14
BRCA1-219ENST00000491747 PZPP20742 1482 aa14.16□□□□□ -0.14
BRCA1-219ENST00000491747 MYO3AQ8NEV4 1616 aa14.15□□□□□ -0.14
BRCA1-219ENST00000491747 UHRF1BP1Q6BDS2 1440 aa14.15□□□□□ -0.14
BRCA1-219ENST00000491747 UNC13BO14795 1591 aa14.13□□□□□ -0.15
BRCA1-219ENST00000491747 ZNF142P52746 1687 aaPredicted RBP14.12□□□□□ -0.15
BRCA1-219ENST00000491747 GCC2Q8IWJ2 1684 aa14.12□□□□□ -0.15
BRCA1-219ENST00000491747 LMTK2Q8IWU2 1503 aa14.11□□□□□ -0.15
BRCA1-219ENST00000491747 STRCQ7RTU9 1775 aa14.11□□□□□ -0.15
BRCA1-219ENST00000491747 KANK1Q14678 1352 aa14.1□□□□□ -0.15
BRCA1-219ENST00000491747 SPATA31D1Q6ZQQ2 1576 aa14.1□□□□□ -0.15
BRCA1-219ENST00000491747 CEP170BQ9Y4F5 1589 aaPredicted RBP14.1□□□□□ -0.15
BRCA1-219ENST00000491747 NAIPQ13075 1403 aa14.1□□□□□ -0.15
BRCA1-219ENST00000491747 ERVK-7P63135 1459 aa14.09□□□□□ -0.15
BRCA1-219ENST00000491747 TNRQ92752 1358 aa14.09□□□□□ -0.15
BRCA1-219ENST00000491747 ARHGAP31Q2M1Z3 1444 aa14.09□□□□□ -0.15
BRCA1-219ENST00000491747 EFCAB6Q5THR3 1501 aa14.08□□□□□ -0.16
BRCA1-219ENST00000491747 IQGAP3Q86VI3 1631 aa14.07□□□□□ -0.16
BRCA1-219ENST00000491747 TET3O43151 1660 aa14.07□□□□□ -0.16
BRCA1-219ENST00000491747 A2ML1A8K2U0 1454 aa14.06□□□□□ -0.16
BRCA1-219ENST00000491747 HFM1A2PYH4 1435 aa14.06□□□□□ -0.16
BRCA1-219ENST00000491747 E9PCH4 1651 aa14.05□□□□□ -0.16
BRCA1-219ENST00000491747 SYNMO15061 1565 aa14.04□□□□□ -0.16
BRCA1-219ENST00000491747 NUP155O75694 1391 aa14.03□□□□□ -0.16
BRCA1-219ENST00000491747 NLRP1Q9C000 1473 aa14.03□□□□□ -0.16
BRCA1-219ENST00000491747 UBR1Q8IWV7 1749 aa14.02□□□□□ -0.17
BRCA1-219ENST00000491747 NOS1P29475 1434 aa14.01□□□□□ -0.17
BRCA1-219ENST00000491747 UGGT1Q9NYU2 1555 aa14.01□□□□□ -0.17
BRCA1-219ENST00000491747 PIK3C2BO00750 1634 aa14.01□□□□□ -0.17
BRCA1-219ENST00000491747 RPRD2Q5VT52 1461 aaKnown RBP14□□□□□ -0.17
BRCA1-219ENST00000491747 NCKAP5LQ9HCH0 1330 aa13.99□□□□□ -0.17
BRCA1-219ENST00000491747 PLA2R1Q13018 1463 aa13.99□□□□□ -0.17
BRCA1-219ENST00000491747 POLR1AO95602 1720 aaPredicted RBP13.98□□□□□ -0.17
BRCA1-219ENST00000491747 IDI1Q13907 227 aa13.97□□□□□ -0.17
BRCA1-219ENST00000491747 MYO5BQ9ULV0 1848 aa13.97□□□□□ -0.17
BRCA1-219ENST00000491747 NEURL4Q96JN8 1562 aa13.96□□□□□ -0.17
BRCA1-219ENST00000491747 THEMISQ8N1K5 641 aaPredicted RBP13.95□□□□□ -0.18
BRCA1-219ENST00000491747 TRIM52Q96A61 297 aa13.95□□□□□ -0.18
BRCA1-219ENST00000491747 SPHKAPQ2M3C7 1700 aa13.95□□□□□ -0.18
BRCA1-219ENST00000491747 KDM5AP29375 1690 aaKnown RBP13.95□□□□□ -0.18
BRCA1-219ENST00000491747 PTPRTO14522 1441 aa13.94□□□□□ -0.18
BRCA1-219ENST00000491747 SETD5Q9C0A6 1442 aa13.94□□□□□ -0.18
BRCA1-219ENST00000491747 PELP1Q8IZL8 1130 aaKnown RBP13.94□□□□□ -0.18
BRCA1-219ENST00000491747 PKD2Q13563 968 aa13.93□□□□□ -0.18
BRCA1-219ENST00000491747 DMRT2Q9Y5R5 561 aa13.93□□□□□ -0.18
BRCA1-219ENST00000491747 ADGRB3O60242 1522 aa13.92□□□□□ -0.18
BRCA1-219ENST00000491747 TMEM131LA2VDJ0 1609 aa13.92□□□□□ -0.18
BRCA1-219ENST00000491747 ARHGAP23Q9P227 1491 aa13.92□□□□□ -0.18
BRCA1-219ENST00000491747 SLC52A1Q9NWF4 448 aa13.91□□□□□ -0.18
BRCA1-219ENST00000491747 SLIT1O75093 1534 aa13.91□□□□□ -0.18
BRCA1-219ENST00000491747 ANKLE2Q86XL3 938 aa13.9□□□□□ -0.18
BRCA1-219ENST00000491747 RAB3GAP2Q9H2M9 1393 aa13.9□□□□□ -0.18
BRCA1-219ENST00000491747 LTKP29376 864 aa13.9□□□□□ -0.18
BRCA1-219ENST00000491747 SLC4A1APQ9BWU0 796 aaKnown RBP13.89□□□□□ -0.19
BRCA1-219ENST00000491747 IQGAP1P46940 1657 aa13.89□□□□□ -0.19
BRCA1-219ENST00000491747 MED14O60244 1454 aa13.89□□□□□ -0.19
BRCA1-219ENST00000491747 STAG3Q9UJ98 1225 aa13.89□□□□□ -0.19
BRCA1-219ENST00000491747 CLTCL1P53675 1640 aa13.89□□□□□ -0.19
BRCA1-219ENST00000491747 TMEM2Q9UHN6 1383 aa13.88□□□□□ -0.19
BRCA1-219ENST00000491747 FOXD1Q16676 465 aa13.88□□□□□ -0.19
BRCA1-219ENST00000491747 TRPM2O94759 1503 aa13.87□□□□□ -0.19
BRCA1-219ENST00000491747 NPHP4O75161 1426 aaPredicted RBP13.87□□□□□ -0.19
BRCA1-219ENST00000491747 MPHOSPH9Q99550 1183 aa13.87□□□□□ -0.19
BRCA1-219ENST00000491747 SCAF11Q99590 1463 aaKnown RBP13.87□□□□□ -0.19
BRCA1-219ENST00000491747 LTBP4Q8N2S1 1624 aa13.86□□□□□ -0.19
BRCA1-219ENST00000491747 TXNDC2Q86VQ3 553 aa13.86□□□□□ -0.19
BRCA1-219ENST00000491747 CHGAP10645 457 aaKnown RBP13.85□□□□□ -0.19
BRCA1-219ENST00000491747 ZNF335Q9H4Z2 1342 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms