RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 KDM5DQ9BY66 1539 aa28.89■■■□□ 2.22
SMIM4-205ENST00000491607 ZNF142P52746 1687 aaPredicted RBP28.89■■■□□ 2.21
SMIM4-205ENST00000491607 WASHC2CQ9Y4E1 1318 aa28.89■■■□□ 2.21
SMIM4-205ENST00000491607 MAST1Q9Y2H9 1570 aa28.86■■■□□ 2.21
SMIM4-205ENST00000491607 NCKAP5LQ9HCH0 1330 aa28.86■■■□□ 2.21
SMIM4-205ENST00000491607 FAM135AQ9P2D6 1515 aa28.85■■■□□ 2.21
SMIM4-205ENST00000491607 FBXO31Q5XUX0 539 aaPredicted RBP28.83■■■□□ 2.21
SMIM4-205ENST00000491607 PZPP20742 1482 aa28.81■■■□□ 2.2
SMIM4-205ENST00000491607 PLA2R1Q13018 1463 aa28.81■■■□□ 2.2
SMIM4-205ENST00000491607 A2ML1A8K2U0 1454 aa28.8■■■□□ 2.2
SMIM4-205ENST00000491607 TNRQ92752 1358 aa28.8■■■□□ 2.2
SMIM4-205ENST00000491607 PKD2Q13563 968 aa28.78■■■□□ 2.2
SMIM4-205ENST00000491607 DNMT1P26358 1616 aaKnown RBP28.76■■■□□ 2.19
SMIM4-205ENST00000491607 LTBP4Q8N2S1 1624 aa28.76■■■□□ 2.19
SMIM4-205ENST00000491607 RNF17Q9BXT8 1623 aaKnown RBP28.76■■■□□ 2.19
SMIM4-205ENST00000491607 TCOF1Q13428 1488 aaKnown RBP28.75■■■□□ 2.19
SMIM4-205ENST00000491607 PTPN23Q9H3S7 1636 aa28.75■■■□□ 2.19
SMIM4-205ENST00000491607 EIF2AK4Q9P2K8 1649 aaKnown RBP28.74■■■□□ 2.19
SMIM4-205ENST00000491607 DUOX2Q9NRD8 1548 aa28.71■■■□□ 2.19
SMIM4-205ENST00000491607 ABCC5O15440 1437 aa28.7■■■□□ 2.19
SMIM4-205ENST00000491607 ABCC3O15438 1527 aa28.7■■■□□ 2.19
SMIM4-205ENST00000491607 ZC3H13Q5T200 1668 aaKnown RBP28.7■■■□□ 2.18
SMIM4-205ENST00000491607 ZNF335Q9H4Z2 1342 aaPredicted RBP28.69■■■□□ 2.18
SMIM4-205ENST00000491607 FGD6Q6ZV73 1430 aa28.69■■■□□ 2.18
SMIM4-205ENST00000491607 SHANK2Q9UPX8 1470 aa28.69■■■□□ 2.18
SMIM4-205ENST00000491607 CROCC2H7BZ55 1655 aa28.69■■■□□ 2.18
SMIM4-205ENST00000491607 KIF15Q9NS87 1388 aa28.68■■■□□ 2.18
SMIM4-205ENST00000491607 RRP7BPQ9NSQ0 103 aa28.67■■■□□ 2.18
SMIM4-205ENST00000491607 DAPK1P53355 1430 aa28.67■■■□□ 2.18
SMIM4-205ENST00000491607 MROH1Q8NDA8 1641 aa28.66■■■□□ 2.18
SMIM4-205ENST00000491607 NLRP1Q9C000 1473 aa28.66■■■□□ 2.18
SMIM4-205ENST00000491607 IQSEC2Q5JU85 1478 aa28.63■■■□□ 2.17
SMIM4-205ENST00000491607 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.62■■■□□ 2.17
SMIM4-205ENST00000491607 UGGT1Q9NYU2 1555 aa28.62■■■□□ 2.17
SMIM4-205ENST00000491607 ERBINQ96RT1 1412 aa28.62■■■□□ 2.17
SMIM4-205ENST00000491607 THEMISQ8N1K5 641 aaPredicted RBP28.62■■■□□ 2.17
SMIM4-205ENST00000491607 CEP152O94986 1710 aa28.6■■■□□ 2.17
SMIM4-205ENST00000491607 POLR1AO95602 1720 aaPredicted RBP28.6■■■□□ 2.17
SMIM4-205ENST00000491607 SPATA31D1Q6ZQQ2 1576 aa28.59■■■□□ 2.17
SMIM4-205ENST00000491607 CHIC2Q9UKJ5 165 aa28.59■■■□□ 2.17
SMIM4-205ENST00000491607 ERVK-7P63135 1459 aa28.59■■■□□ 2.17
SMIM4-205ENST00000491607 ANKLE2Q86XL3 938 aa28.58■■■□□ 2.17
SMIM4-205ENST00000491607 NEURL4Q96JN8 1562 aa28.58■■■□□ 2.17
SMIM4-205ENST00000491607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.57■■■□□ 2.16
SMIM4-205ENST00000491607 PRDM15P57071 1507 aaPredicted RBP28.56■■■□□ 2.16
SMIM4-205ENST00000491607 ANKRD30AQ9BXX3 1397 aa28.55■■■□□ 2.16
SMIM4-205ENST00000491607 FAM50AQ14320 339 aaKnown RBP28.53■■■□□ 2.16
SMIM4-205ENST00000491607 KANK1Q14678 1352 aa28.5■■■□□ 2.15
SMIM4-205ENST00000491607 UBAP1LF5GYI3 381 aa28.49■■■□□ 2.15
SMIM4-205ENST00000491607 DEPDC5O75140 1603 aa28.49■■■□□ 2.15
SMIM4-205ENST00000491607 NPHP4O75161 1426 aaPredicted RBP28.48■■■□□ 2.15
SMIM4-205ENST00000491607 ARHGAP31Q2M1Z3 1444 aa28.47■■■□□ 2.15
SMIM4-205ENST00000491607 MED14O60244 1454 aa28.46■■■□□ 2.15
SMIM4-205ENST00000491607 CFAP65Q6ZU64 1925 aaKnown RBP28.44■■■□□ 2.14
SMIM4-205ENST00000491607 CPS1P31327 1500 aa28.43■■■□□ 2.14
SMIM4-205ENST00000491607 ADGRL2O95490 1459 aa28.42■■■□□ 2.14
SMIM4-205ENST00000491607 IQGAP1P46940 1657 aa28.42■■■□□ 2.14
SMIM4-205ENST00000491607 UBR1Q8IWV7 1749 aa28.41■■■□□ 2.14
SMIM4-205ENST00000491607 VWDEQ8N2E2 1590 aa28.39■■■□□ 2.14
SMIM4-205ENST00000491607 LMTK2Q8IWU2 1503 aa28.38■■■□□ 2.13
SMIM4-205ENST00000491607 STAG3Q9UJ98 1225 aa28.35■■■□□ 2.13
SMIM4-205ENST00000491607 DISP3Q9P2K9 1392 aa28.35■■■□□ 2.13
SMIM4-205ENST00000491607 SCAF11Q99590 1463 aaKnown RBP28.34■■■□□ 2.13
SMIM4-205ENST00000491607 ANKRD50Q9ULJ7 1429 aa28.34■■■□□ 2.13
SMIM4-205ENST00000491607 PIK3C2BO00750 1634 aa28.32■■■□□ 2.12
SMIM4-205ENST00000491607 TXNDC2Q86VQ3 553 aa28.32■■■□□ 2.12
SMIM4-205ENST00000491607 SCAF1Q9H7N4 1312 aaKnown RBP28.32■■■□□ 2.12
SMIM4-205ENST00000491607 SLIT1O75093 1534 aa28.31■■■□□ 2.12
SMIM4-205ENST00000491607 EFCAB6Q5THR3 1501 aa28.31■■■□□ 2.12
SMIM4-205ENST00000491607 ARHGAP23Q9P227 1491 aa28.3■■■□□ 2.12
SMIM4-205ENST00000491607 LTKP29376 864 aa28.3■■■□□ 2.12
SMIM4-205ENST00000491607 EID1Q9Y6B2 187 aa28.3■■■□□ 2.12
SMIM4-205ENST00000491607 TOM1O60784 492 aa28.29■■■□□ 2.12
SMIM4-205ENST00000491607 PIP4K2BP78356 416 aa28.29■■■□□ 2.12
SMIM4-205ENST00000491607 IDI1Q13907 227 aa28.27■■■□□ 2.12
SMIM4-205ENST00000491607 PPARGC1BQ86YN6 1023 aaKnown RBP28.27■■■□□ 2.12
SMIM4-205ENST00000491607 SYNMO15061 1565 aa28.26■■■□□ 2.11
SMIM4-205ENST00000491607 TMEM2Q9UHN6 1383 aa28.25■■■□□ 2.11
SMIM4-205ENST00000491607 NOS1P29475 1434 aa28.24■■■□□ 2.11
SMIM4-205ENST00000491607 STRCP1A6NGW2 1772 aa28.22■■■□□ 2.11
SMIM4-205ENST00000491607 ITGAEP38570 1179 aa28.21■■■□□ 2.11
SMIM4-205ENST00000491607 LRRC7Q96NW7 1537 aa28.21■■■□□ 2.11
SMIM4-205ENST00000491607 KDM5AP29375 1690 aaKnown RBP28.2■■■□□ 2.11
SMIM4-205ENST00000491607 RPRD2Q5VT52 1461 aaKnown RBP28.2■■■□□ 2.1
SMIM4-205ENST00000491607 ROCK1Q13464 1354 aa28.19■■■□□ 2.1
SMIM4-205ENST00000491607 SLC52A1Q9NWF4 448 aa28.18■■■□□ 2.1
SMIM4-205ENST00000491607 ADGRB3O60242 1522 aa28.18■■■□□ 2.1
SMIM4-205ENST00000491607 TET3O43151 1660 aa28.16■■■□□ 2.1
SMIM4-205ENST00000491607 UNC13BO14795 1591 aa28.16■■■□□ 2.1
SMIM4-205ENST00000491607 HSPA1LP34931 641 aa28.16■■■□□ 2.1
SMIM4-205ENST00000491607 ILDR2Q71H61 639 aa28.13■■■□□ 2.09
SMIM4-205ENST00000491607 ALKQ9UM73 1620 aa28.11■■■□□ 2.09
SMIM4-205ENST00000491607 GCC2Q8IWJ2 1684 aa28.11■■■□□ 2.09
SMIM4-205ENST00000491607 BCANQ96GW7 911 aa28.09■■■□□ 2.09
SMIM4-205ENST00000491607 SLC26A8Q96RN1 970 aa28.09■■■□□ 2.09
SMIM4-205ENST00000491607 SENP3Q9H4L4 574 aaPredicted RBP28.06■■■□□ 2.08
SMIM4-205ENST00000491607 NUP155O75694 1391 aa28.06■■■□□ 2.08
SMIM4-205ENST00000491607 IQGAP3Q86VI3 1631 aa28.05■■■□□ 2.08
SMIM4-205ENST00000491607 E9PCH4 1651 aa28.04■■■□□ 2.08
SMIM4-205ENST00000491607 CHGAP10645 457 aaKnown RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms