RNA–Protein interactions for RNA: ENST00000491553.1

TBC1D1-212, Transcript of TBC1 domain family member 1, humanhuman

TSL 2

Gene TBC1D1, Length 455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-212ENST00000491553 CLIP1P30622 1438 aa11.18□□□□□ -0.62
TBC1D1-212ENST00000491553 CDK11AQ9UQ88 783 aaPredicted RBP11.17□□□□□ -0.62
TBC1D1-212ENST00000491553 SYCP2Q9BX26 1530 aa11.17□□□□□ -0.62
TBC1D1-212ENST00000491553 GGT6Q6P531 493 aa11.16□□□□□ -0.62
TBC1D1-212ENST00000491553 RNF17Q9BXT8 1623 aaKnown RBP11.15□□□□□ -0.62
TBC1D1-212ENST00000491553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.15□□□□□ -0.63
TBC1D1-212ENST00000491553 ATP7AQ04656 1500 aa11.14□□□□□ -0.63
TBC1D1-212ENST00000491553 LRRC7Q96NW7 1537 aa11.14□□□□□ -0.63
TBC1D1-212ENST00000491553 SPAG9O60271 1321 aaKnown RBP11.14□□□□□ -0.63
TBC1D1-212ENST00000491553 A2MP01023 1474 aa11.14□□□□□ -0.63
TBC1D1-212ENST00000491553 FBXO31Q5XUX0 539 aaPredicted RBP11.14□□□□□ -0.63
TBC1D1-212ENST00000491553 FMN1Q68DA7 1419 aa11.14□□□□□ -0.63
TBC1D1-212ENST00000491553 INO80Q9ULG1 1556 aaPredicted RBP11.14□□□□□ -0.63
TBC1D1-212ENST00000491553 ARHGAP35Q9NRY4 1499 aa11.13□□□□□ -0.63
TBC1D1-212ENST00000491553 NPHP4O75161 1426 aaPredicted RBP11.12□□□□□ -0.63
TBC1D1-212ENST00000491553 HNRNPMP52272 730 aaKnown RBP eCLIP11.12□□□□□ -0.63
TBC1D1-212ENST00000491553 EHMT2Q96KQ7 1210 aa11.12□□□□□ -0.63
TBC1D1-212ENST00000491553 ZNF777Q9ULD5 760 aaPredicted RBP11.12□□□□□ -0.63
TBC1D1-212ENST00000491553 TNRQ92752 1358 aa11.12□□□□□ -0.63
TBC1D1-212ENST00000491553 IQGAP1P46940 1657 aa11.11□□□□□ -0.63
TBC1D1-212ENST00000491553 MED14O60244 1454 aa11.11□□□□□ -0.63
TBC1D1-212ENST00000491553 DEPDC5O75140 1603 aa11.1□□□□□ -0.63
TBC1D1-212ENST00000491553 ANKLE2Q86XL3 938 aa11.1□□□□□ -0.63
TBC1D1-212ENST00000491553 SYNMO15061 1565 aa11.1□□□□□ -0.63
TBC1D1-212ENST00000491553 XIRP1Q702N8 1843 aaKnown RBP11.09□□□□□ -0.63
TBC1D1-212ENST00000491553 EEA1Q15075 1411 aa11.07□□□□□ -0.64
TBC1D1-212ENST00000491553 ADGBQ8N7X0 1667 aa11.07□□□□□ -0.64
TBC1D1-212ENST00000491553 UGGT1Q9NYU2 1555 aa11.07□□□□□ -0.64
TBC1D1-212ENST00000491553 PZPP20742 1482 aa11.06□□□□□ -0.64
TBC1D1-212ENST00000491553 GPATCH8Q9UKJ3 1502 aaKnown RBP11.06□□□□□ -0.64
TBC1D1-212ENST00000491553 ZC3H13Q5T200 1668 aaKnown RBP11.05□□□□□ -0.64
TBC1D1-212ENST00000491553 THEMISQ8N1K5 641 aaPredicted RBP11.04□□□□□ -0.64
TBC1D1-212ENST00000491553 FAM135AQ9P2D6 1515 aa11.04□□□□□ -0.64
TBC1D1-212ENST00000491553 MIA2Q96PC5 1412 aa11.03□□□□□ -0.64
TBC1D1-212ENST00000491553 KIAA1107Q9UPP5 1409 aa11.03□□□□□ -0.64
TBC1D1-212ENST00000491553 UPF1Q92900 1129 aaKnown RBP eCLIP11.03□□□□□ -0.64
TBC1D1-212ENST00000491553 KDM5DQ9BY66 1539 aa11.03□□□□□ -0.64
TBC1D1-212ENST00000491553 NLRP1Q9C000 1473 aa11.02□□□□□ -0.65
TBC1D1-212ENST00000491553 ROBO1Q9Y6N7 1651 aa11.01□□□□□ -0.65
TBC1D1-212ENST00000491553 CCDC18Q5T9S5 1454 aa11.01□□□□□ -0.65
TBC1D1-212ENST00000491553 UBTFP17480 764 aaKnown RBP11.01□□□□□ -0.65
TBC1D1-212ENST00000491553 ZNF644Q9H582 1327 aaPredicted RBP11.01□□□□□ -0.65
TBC1D1-212ENST00000491553 FAM135BQ49AJ0 1406 aa11.01□□□□□ -0.65
TBC1D1-212ENST00000491553 KIF3BO15066 747 aa11□□□□□ -0.65
TBC1D1-212ENST00000491553 NPM3O75607 178 aaKnown RBP11□□□□□ -0.65
TBC1D1-212ENST00000491553 NCBP3Q53F19 620 aaKnown RBP11□□□□□ -0.65
TBC1D1-212ENST00000491553 CASKIN1Q8WXD9 1431 aa11□□□□□ -0.65
TBC1D1-212ENST00000491553 PLEKHH2Q8IVE3 1493 aa11□□□□□ -0.65
TBC1D1-212ENST00000491553 CFDP1Q9UEE9 299 aaPredicted RBP10.99□□□□□ -0.65
TBC1D1-212ENST00000491553 DHX29Q7Z478 1369 aaKnown RBP10.99□□□□□ -0.65
TBC1D1-212ENST00000491553 TRIM52Q96A61 297 aa10.98□□□□□ -0.65
TBC1D1-212ENST00000491553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.97□□□□□ -0.65
TBC1D1-212ENST00000491553 WASHC2CQ9Y4E1 1318 aa10.97□□□□□ -0.65
TBC1D1-212ENST00000491553 MBD5Q9P267 1494 aa10.97□□□□□ -0.65
TBC1D1-212ENST00000491553 UBR1Q8IWV7 1749 aa10.96□□□□□ -0.65
TBC1D1-212ENST00000491553 RBM33Q96EV2 1170 aaKnown RBP10.96□□□□□ -0.65
TBC1D1-212ENST00000491553 CFAP65Q6ZU64 1925 aaKnown RBP10.96□□□□□ -0.66
TBC1D1-212ENST00000491553 LRP6O75581 1613 aa10.95□□□□□ -0.66
TBC1D1-212ENST00000491553 SCAF11Q99590 1463 aaKnown RBP10.95□□□□□ -0.66
TBC1D1-212ENST00000491553 CCNB3Q8WWL7 1395 aa10.95□□□□□ -0.66
TBC1D1-212ENST00000491553 LTKP29376 864 aa10.95□□□□□ -0.66
TBC1D1-212ENST00000491553 PHLPP1O60346 1717 aa10.95□□□□□ -0.66
TBC1D1-212ENST00000491553 MAP3K1Q13233 1512 aa10.94□□□□□ -0.66
TBC1D1-212ENST00000491553 NCOA2Q15596 1464 aa10.94□□□□□ -0.66
TBC1D1-212ENST00000491553 TMEM94Q12767 1356 aa10.94□□□□□ -0.66
TBC1D1-212ENST00000491553 ERVK-7P63135 1459 aa10.93□□□□□ -0.66
TBC1D1-212ENST00000491553 RTEL1-TNFRSF6BF6WH68 1400 aa10.93□□□□□ -0.66
TBC1D1-212ENST00000491553 TIAM1Q13009 1591 aa10.93□□□□□ -0.66
TBC1D1-212ENST00000491553 FYCO1Q9BQS8 1478 aa10.93□□□□□ -0.66
TBC1D1-212ENST00000491553 ABCC3O15438 1527 aa10.92□□□□□ -0.66
TBC1D1-212ENST00000491553 ARHGAP23Q9P227 1491 aa10.92□□□□□ -0.66
TBC1D1-212ENST00000491553 JCADQ9P266 1359 aa10.91□□□□□ -0.66
TBC1D1-212ENST00000491553 COL16A1Q07092 1604 aaPredicted RBP10.91□□□□□ -0.66
TBC1D1-212ENST00000491553 SLIT1O75093 1534 aa10.9□□□□□ -0.66
TBC1D1-212ENST00000491553 TXNDC2Q86VQ3 553 aa10.9□□□□□ -0.66
TBC1D1-212ENST00000491553 CEP152O94986 1710 aa10.89□□□□□ -0.67
TBC1D1-212ENST00000491553 LRRC9Q6ZRR7 1453 aa10.88□□□□□ -0.67
TBC1D1-212ENST00000491553 CCDC141Q6ZP82 1450 aa10.87□□□□□ -0.67
TBC1D1-212ENST00000491553 MEX3CQ5U5Q3 659 aaKnown RBP10.87□□□□□ -0.67
TBC1D1-212ENST00000491553 PROSER2Q86WR7 435 aaPredicted RBP10.87□□□□□ -0.67
TBC1D1-212ENST00000491553 MROH1Q8NDA8 1641 aa10.87□□□□□ -0.67
TBC1D1-212ENST00000491553 ZNF772Q68DY9 489 aaPredicted RBP10.86□□□□□ -0.67
TBC1D1-212ENST00000491553 PRDM15P57071 1507 aaPredicted RBP10.85□□□□□ -0.67
TBC1D1-212ENST00000491553 KCNA6P17658 529 aa10.85□□□□□ -0.67
TBC1D1-212ENST00000491553 RXRBP28702 533 aa10.85□□□□□ -0.67
TBC1D1-212ENST00000491553 SLC26A8Q96RN1 970 aa10.85□□□□□ -0.67
TBC1D1-212ENST00000491553 SLAIN2Q9P270 581 aa10.85□□□□□ -0.67
TBC1D1-212ENST00000491553 MTUS2Q5JR59 1369 aa10.85□□□□□ -0.67
TBC1D1-212ENST00000491553 PIK3C2BO00750 1634 aa10.84□□□□□ -0.67
TBC1D1-212ENST00000491553 CAMSAP2Q08AD1 1489 aa10.84□□□□□ -0.67
TBC1D1-212ENST00000491553 TET3O43151 1660 aa10.83□□□□□ -0.68
TBC1D1-212ENST00000491553 SHPRHQ149N8 1683 aa10.83□□□□□ -0.68
TBC1D1-212ENST00000491553 NWD1Q149M9 1564 aa10.83□□□□□ -0.68
TBC1D1-212ENST00000491553 SETBP1Q9Y6X0 1596 aa10.83□□□□□ -0.68
TBC1D1-212ENST00000491553 CDK12Q9NYV4 1490 aaPredicted RBP10.83□□□□□ -0.68
TBC1D1-212ENST00000491553 EID1Q9Y6B2 187 aa10.83□□□□□ -0.68
TBC1D1-212ENST00000491553 RGS12O14924 1447 aa10.83□□□□□ -0.68
TBC1D1-212ENST00000491553 SPATA31A6Q5VVP1 1343 aa10.83□□□□□ -0.68
TBC1D1-212ENST00000491553 MSH6P52701 1360 aa10.82□□□□□ -0.68
TBC1D1-212ENST00000491553 TMEM2Q9UHN6 1383 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms