RNA–Protein interactions for RNA: ENST00000491544.1

PCYT1A-216, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-216ENST00000491544 RGS12O14924 1447 aa16.8■□□□□ 0.28
PCYT1A-216ENST00000491544 XIRP1Q702N8 1843 aaKnown RBP16.8■□□□□ 0.28
PCYT1A-216ENST00000491544 UBTFP17480 764 aaKnown RBP16.79■□□□□ 0.28
PCYT1A-216ENST00000491544 MEX3CQ5U5Q3 659 aaKnown RBP16.79■□□□□ 0.28
PCYT1A-216ENST00000491544 TNRQ92752 1358 aa16.78■□□□□ 0.28
PCYT1A-216ENST00000491544 LOC105371045A0A1W2PR82 267 aa16.78■□□□□ 0.28
PCYT1A-216ENST00000491544 EP400Q96L91 3159 aa16.77■□□□□ 0.28
PCYT1A-216ENST00000491544 THEMISQ8N1K5 641 aaPredicted RBP16.75■□□□□ 0.27
PCYT1A-216ENST00000491544 KIF14Q15058 1648 aa16.74■□□□□ 0.27
PCYT1A-216ENST00000491544 PHLPP1O60346 1717 aa16.74■□□□□ 0.27
PCYT1A-216ENST00000491544 LRP5O75197 1615 aa16.74■□□□□ 0.27
PCYT1A-216ENST00000491544 SPATA31A6Q5VVP1 1343 aa16.73■□□□□ 0.27
PCYT1A-216ENST00000491544 PLXNC1O60486 1568 aa16.73■□□□□ 0.27
PCYT1A-216ENST00000491544 KDM5DQ9BY66 1539 aa16.73■□□□□ 0.27
PCYT1A-216ENST00000491544 FAM135AQ9P2D6 1515 aa16.73■□□□□ 0.27
PCYT1A-216ENST00000491544 UGGT1Q9NYU2 1555 aa16.72■□□□□ 0.27
PCYT1A-216ENST00000491544 NUTM2BA6NNL0 878 aaPredicted RBP16.72■□□□□ 0.27
PCYT1A-216ENST00000491544 NUTM2EB1AL46 878 aaPredicted RBP16.72■□□□□ 0.27
PCYT1A-216ENST00000491544 RANGAP1P46060 587 aaPredicted RBP16.72■□□□□ 0.27
PCYT1A-216ENST00000491544 NUTM2DQ5VT03 806 aaPredicted RBP16.72■□□□□ 0.27
PCYT1A-216ENST00000491544 GGT6Q6P531 493 aa16.72■□□□□ 0.27
PCYT1A-216ENST00000491544 NUTM2AQ8IVF1 878 aaPredicted RBP16.72■□□□□ 0.27
PCYT1A-216ENST00000491544 ZC3H13Q5T200 1668 aaKnown RBP16.72■□□□□ 0.27
PCYT1A-216ENST00000491544 FBXO31Q5XUX0 539 aaPredicted RBP16.71■□□□□ 0.27
PCYT1A-216ENST00000491544 LRRC9Q6ZRR7 1453 aa16.71■□□□□ 0.27
PCYT1A-216ENST00000491544 ATAD2Q6PL18 1390 aa16.7■□□□□ 0.26
PCYT1A-216ENST00000491544 COL16A1Q07092 1604 aaPredicted RBP16.7■□□□□ 0.26
PCYT1A-216ENST00000491544 SAMD9LQ8IVG5 1584 aa16.68■□□□□ 0.26
PCYT1A-216ENST00000491544 NLRP1Q9C000 1473 aa16.67■□□□□ 0.26
PCYT1A-216ENST00000491544 ATP7AQ04656 1500 aa16.67■□□□□ 0.26
PCYT1A-216ENST00000491544 FGD6Q6ZV73 1430 aa16.67■□□□□ 0.26
PCYT1A-216ENST00000491544 TMEM94Q12767 1356 aa16.66■□□□□ 0.26
PCYT1A-216ENST00000491544 CDC42BPBQ9Y5S2 1711 aa16.65■□□□□ 0.26
PCYT1A-216ENST00000491544 A2MP01023 1474 aa16.65■□□□□ 0.26
PCYT1A-216ENST00000491544 PZPP20742 1482 aa16.65■□□□□ 0.26
PCYT1A-216ENST00000491544 AFF2P51816 1311 aa16.65■□□□□ 0.26
PCYT1A-216ENST00000491544 MAP3K1Q13233 1512 aa16.65■□□□□ 0.26
PCYT1A-216ENST00000491544 YY1P25490 414 aa16.63■□□□□ 0.25
PCYT1A-216ENST00000491544 MIA2Q96PC5 1412 aa16.62■□□□□ 0.25
PCYT1A-216ENST00000491544 RBM6P78332 1123 aaKnown RBP16.61■□□□□ 0.25
PCYT1A-216ENST00000491544 SPAG9O60271 1321 aaKnown RBP16.6■□□□□ 0.25
PCYT1A-216ENST00000491544 CEP162Q5TB80 1403 aa16.6■□□□□ 0.25
PCYT1A-216ENST00000491544 PREX2Q70Z35 1606 aa16.59■□□□□ 0.25
PCYT1A-216ENST00000491544 SHPRHQ149N8 1683 aa16.59■□□□□ 0.25
PCYT1A-216ENST00000491544 TROQ12816 1431 aaPredicted RBP16.59■□□□□ 0.25
PCYT1A-216ENST00000491544 CLIP1P30622 1438 aa16.58■□□□□ 0.24
PCYT1A-216ENST00000491544 SCAF11Q99590 1463 aaKnown RBP16.56■□□□□ 0.24
PCYT1A-216ENST00000491544 ARHGAP35Q9NRY4 1499 aa16.56■□□□□ 0.24
PCYT1A-216ENST00000491544 SLAIN2Q9P270 581 aa16.56■□□□□ 0.24
PCYT1A-216ENST00000491544 INO80Q9ULG1 1556 aaPredicted RBP16.55■□□□□ 0.24
PCYT1A-216ENST00000491544 QTRT2Q9H974 415 aaKnown RBP16.55■□□□□ 0.24
PCYT1A-216ENST00000491544 CDK11AQ9UQ88 783 aaPredicted RBP16.54■□□□□ 0.24
PCYT1A-216ENST00000491544 NHSL1Q5SYE7 1610 aa16.54■□□□□ 0.24
PCYT1A-216ENST00000491544 TIAM1Q13009 1591 aa16.52■□□□□ 0.24
PCYT1A-216ENST00000491544 SYCP2Q9BX26 1530 aa16.52■□□□□ 0.24
PCYT1A-216ENST00000491544 CCDC125Q86Z20 511 aa16.52■□□□□ 0.24
PCYT1A-216ENST00000491544 NWD1Q149M9 1564 aa16.51■□□□□ 0.23
PCYT1A-216ENST00000491544 SENP3-EIF4A1A0A087X0R7 540 aa16.5■□□□□ 0.23
PCYT1A-216ENST00000491544 MSH6P52701 1360 aa16.5■□□□□ 0.23
PCYT1A-216ENST00000491544 AHDC1Q5TGY3 1603 aaPredicted RBP16.49■□□□□ 0.23
PCYT1A-216ENST00000491544 PRDM15P57071 1507 aaPredicted RBP16.49■□□□□ 0.23
PCYT1A-216ENST00000491544 LTKP29376 864 aa16.48■□□□□ 0.23
PCYT1A-216ENST00000491544 PROSER2Q86WR7 435 aaPredicted RBP16.48■□□□□ 0.23
PCYT1A-216ENST00000491544 NGLY1Q96IV0 654 aa16.48■□□□□ 0.23
PCYT1A-216ENST00000491544 CEP350Q5VT06 3117 aa16.48■□□□□ 0.23
PCYT1A-216ENST00000491544 DIP2AQ14689 1571 aa16.47■□□□□ 0.23
PCYT1A-216ENST00000491544 KCNA6P17658 529 aa16.45■□□□□ 0.22
PCYT1A-216ENST00000491544 C8orf37Q96NL8 207 aa16.45■□□□□ 0.22
PCYT1A-216ENST00000491544 ATP1B4Q9UN42 357 aaPredicted RBP16.45■□□□□ 0.22
PCYT1A-216ENST00000491544 NCOA2Q15596 1464 aa16.45■□□□□ 0.22
PCYT1A-216ENST00000491544 ABCC3O15438 1527 aa16.45■□□□□ 0.22
PCYT1A-216ENST00000491544 ADGBQ8N7X0 1667 aa16.44■□□□□ 0.22
PCYT1A-216ENST00000491544 ARHGAP23Q9P227 1491 aa16.44■□□□□ 0.22
PCYT1A-216ENST00000491544 HRCP23327 699 aa16.43■□□□□ 0.22
PCYT1A-216ENST00000491544 HNRNPMP52272 730 aaKnown RBP eCLIP16.43■□□□□ 0.22
PCYT1A-216ENST00000491544 TXNDC2Q86VQ3 553 aa16.43■□□□□ 0.22
PCYT1A-216ENST00000491544 SLIT1O75093 1534 aa16.43■□□□□ 0.22
PCYT1A-216ENST00000491544 NKTRP30414 1462 aaKnown RBP16.42■□□□□ 0.22
PCYT1A-216ENST00000491544 WASHC2CQ9Y4E1 1318 aa16.42■□□□□ 0.22
PCYT1A-216ENST00000491544 ZNF777Q9ULD5 760 aaPredicted RBP16.41■□□□□ 0.22
PCYT1A-216ENST00000491544 UBR1Q8IWV7 1749 aa16.41■□□□□ 0.22
PCYT1A-216ENST00000491544 BCL9LQ86UU0 1499 aa16.41■□□□□ 0.22
PCYT1A-216ENST00000491544 FMN1Q68DA7 1419 aa16.4■□□□□ 0.22
PCYT1A-216ENST00000491544 CDC42BPAQ5VT25 1732 aa16.39■□□□□ 0.21
PCYT1A-216ENST00000491544 PSDA5PKW4 1024 aaPredicted RBP16.39■□□□□ 0.21
PCYT1A-216ENST00000491544 KDM5AP29375 1690 aaKnown RBP16.39■□□□□ 0.21
PCYT1A-216ENST00000491544 LRRIQ1Q96JM4 1722 aa16.39■□□□□ 0.21
PCYT1A-216ENST00000491544 BLMP54132 1417 aaPredicted RBP16.38■□□□□ 0.21
PCYT1A-216ENST00000491544 DEFB132Q7Z7B7 95 aa16.38■□□□□ 0.21
PCYT1A-216ENST00000491544 KIAA1107Q9UPP5 1409 aa16.36■□□□□ 0.21
PCYT1A-216ENST00000491544 DHX29Q7Z478 1369 aaKnown RBP16.36■□□□□ 0.21
PCYT1A-216ENST00000491544 VPS8Q8N3P4 1428 aa16.36■□□□□ 0.21
PCYT1A-216ENST00000491544 KIF3BO15066 747 aa16.35■□□□□ 0.21
PCYT1A-216ENST00000491544 ERVK-7P63135 1459 aa16.35■□□□□ 0.21
PCYT1A-216ENST00000491544 EID1Q9Y6B2 187 aa16.33■□□□□ 0.2
PCYT1A-216ENST00000491544 FYCO1Q9BQS8 1478 aa16.33■□□□□ 0.2
PCYT1A-216ENST00000491544 CASKIN1Q8WXD9 1431 aa16.32■□□□□ 0.2
PCYT1A-216ENST00000491544 MAST1Q9Y2H9 1570 aa16.32■□□□□ 0.2
PCYT1A-216ENST00000491544 SETD5Q9C0A6 1442 aa16.31■□□□□ 0.2
PCYT1A-216ENST00000491544 PLEKHH2Q8IVE3 1493 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms