RNA–Protein interactions for RNA: ENST00000491407.1

PPP1R35-205, Transcript of protein phosphatase 1 regulatory subunit 35, human

TSL 5

Gene PPP1R35, Length 942 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R35-205	ENST00000491407	POLR1A	O95602	1720 aa	Predicted RBP	43.18	■■■■■ 4.5
PPP1R35-205	ENST00000491407	KIF3B	O15066	747 aa		43.17	■■■■■ 4.5
PPP1R35-205	ENST00000491407	TNR	Q92752	1358 aa		43.15	■■■■■ 4.5
PPP1R35-205	ENST00000491407	FBXO31	Q5XUX0	539 aa	Predicted RBP	43.14	■■■■■ 4.5
PPP1R35-205	ENST00000491407	CCDC141	Q6ZP82	1450 aa		43.11	■■■■■ 4.49
PPP1R35-205	ENST00000491407	KDM5D	Q9BY66	1539 aa		43.1	■■■■■ 4.49
PPP1R35-205	ENST00000491407	PZP	P20742	1482 aa		43.09	■■■■■ 4.49
PPP1R35-205	ENST00000491407	NEURL4	Q96JN8	1562 aa		43.07	■■■■■ 4.49
PPP1R35-205	ENST00000491407	FAM135A	Q9P2D6	1515 aa		43.07	■■■■■ 4.48
PPP1R35-205	ENST00000491407	SCAF1	Q9H7N4	1312 aa	Known RBP	43.06	■■■■■ 4.48
PPP1R35-205	ENST00000491407	CAMSAP2	Q08AD1	1489 aa		43.06	■■■■■ 4.48
PPP1R35-205	ENST00000491407	WASHC2C	Q9Y4E1	1318 aa		43.05	■■■■■ 4.48
PPP1R35-205	ENST00000491407	CPS1	P31327	1500 aa		43.03	■■■■■ 4.48
PPP1R35-205	ENST00000491407	RSPH4A	Q5TD94	716 aa		43.03	■■■■■ 4.48
PPP1R35-205	ENST00000491407	NCOA2	Q15596	1464 aa		43.02	■■■■■ 4.48
PPP1R35-205	ENST00000491407	SHANK2	Q9UPX8	1470 aa		43	■■■■■ 4.47
PPP1R35-205	ENST00000491407	PIP4K2B	P78356	416 aa		43	■■■■■ 4.47
PPP1R35-205	ENST00000491407	TOM1	O60784	492 aa		42.98	■■■■■ 4.47
PPP1R35-205	ENST00000491407	ANKLE2	Q86XL3	938 aa		42.98	■■■■■ 4.47
PPP1R35-205	ENST00000491407	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	42.98	■■■■■ 4.47
PPP1R35-205	ENST00000491407	HSPA1L	P34931	641 aa		42.96	■■■■■ 4.47
PPP1R35-205	ENST00000491407	THEMIS	Q8N1K5	641 aa	Predicted RBP	42.95	■■■■■ 4.47
PPP1R35-205	ENST00000491407	MIA2	Q96PC5	1412 aa		42.95	■■■■■ 4.47
PPP1R35-205	ENST00000491407	VPS8	Q8N3P4	1428 aa		42.94	■■■■■ 4.46
PPP1R35-205	ENST00000491407	NLRP1	Q9C000	1473 aa		42.93	■■■■■ 4.46
PPP1R35-205	ENST00000491407	UGGT1	Q9NYU2	1555 aa		42.91	■■■■■ 4.46
PPP1R35-205	ENST00000491407	ARHGEF5	Q12774	1597 aa		42.9	■■■■■ 4.46
PPP1R35-205	ENST00000491407	TSPY4	P0CV99	314 aa		42.9	■■■■■ 4.46
PPP1R35-205	ENST00000491407	TSPY10	P0CW01	314 aa		42.9	■■■■■ 4.46
PPP1R35-205	ENST00000491407	VWDE	Q8N2E2	1590 aa		42.87	■■■■■ 4.45
PPP1R35-205	ENST00000491407	NPHP4	O75161	1426 aa	Predicted RBP	42.86	■■■■■ 4.45
PPP1R35-205	ENST00000491407	MED1	Q15648	1581 aa	Predicted RBP	42.86	■■■■■ 4.45
PPP1R35-205	ENST00000491407	DEPDC5	O75140	1603 aa		42.86	■■■■■ 4.45
PPP1R35-205	ENST00000491407	MED14	O60244	1454 aa		42.82	■■■■■ 4.45
PPP1R35-205	ENST00000491407	IQGAP1	P46940	1657 aa		42.79	■■■■■ 4.44
PPP1R35-205	ENST00000491407	RNF17	Q9BXT8	1623 aa	Known RBP	42.78	■■■■■ 4.44
PPP1R35-205	ENST00000491407	ZC3H13	Q5T200	1668 aa	Known RBP	42.75	■■■■■ 4.43
PPP1R35-205	ENST00000491407	ABCC3	O15438	1527 aa		42.73	■■■■■ 4.43
PPP1R35-205	ENST00000491407	MAST1	Q9Y2H9	1570 aa		42.7	■■■■■ 4.43
PPP1R35-205	ENST00000491407	ALK	Q9UM73	1620 aa		42.69	■■■■■ 4.42
PPP1R35-205	ENST00000491407	EIF2AK4	Q9P2K8	1649 aa	Known RBP	42.68	■■■■■ 4.42
PPP1R35-205	ENST00000491407	STRCP1	A6NGW2	1772 aa		42.67	■■■■■ 4.42
PPP1R35-205	ENST00000491407	CFAP65	Q6ZU64	1925 aa	Known RBP	42.67	■■■■■ 4.42
PPP1R35-205	ENST00000491407	LRRC9	Q6ZRR7	1453 aa		42.66	■■■■■ 4.42
PPP1R35-205	ENST00000491407	ERVK-7	P63135	1459 aa		42.65	■■■■■ 4.42
PPP1R35-205	ENST00000491407	CEP152	O94986	1710 aa		42.63	■■■■■ 4.41
PPP1R35-205	ENST00000491407	LRRC7	Q96NW7	1537 aa		42.61	■■■■■ 4.41
PPP1R35-205	ENST00000491407	MROH1	Q8NDA8	1641 aa		42.6	■■■■■ 4.41
PPP1R35-205	ENST00000491407	KANK4	Q5T7N3	995 aa	Predicted RBP	42.59	■■■■■ 4.41
PPP1R35-205	ENST00000491407	PHF23	Q9BUL5	403 aa	Predicted RBP	42.59	■■■■■ 4.41
PPP1R35-205	ENST00000491407	MAP3K1	Q13233	1512 aa		42.58	■■■■■ 4.41
PPP1R35-205	ENST00000491407	SYNM	O15061	1565 aa		42.57	■■■■■ 4.41
PPP1R35-205	ENST00000491407	UBR1	Q8IWV7	1749 aa		42.57	■■■■■ 4.4
PPP1R35-205	ENST00000491407	SENP3	Q9H4L4	574 aa	Predicted RBP	42.56	■■■■■ 4.4
PPP1R35-205	ENST00000491407	DUOX2	Q9NRD8	1548 aa		42.49	■■■■■ 4.39
PPP1R35-205	ENST00000491407	SCAF11	Q99590	1463 aa	Known RBP	42.48	■■■■■ 4.39
PPP1R35-205	ENST00000491407	MYOM3	Q5VTT5	1437 aa		42.47	■■■■■ 4.39
PPP1R35-205	ENST00000491407	APLP2	Q06481	763 aa		42.45	■■■■■ 4.39
PPP1R35-205	ENST00000491407	TXNDC2	Q86VQ3	553 aa		42.41	■■■■■ 4.38
PPP1R35-205	ENST00000491407	LTK	P29376	864 aa		42.4	■■■■■ 4.38
PPP1R35-205	ENST00000491407	ARHGAP23	Q9P227	1491 aa		42.39	■■■■■ 4.38
PPP1R35-205	ENST00000491407	SLIT1	O75093	1534 aa		42.39	■■■■■ 4.38
PPP1R35-205	ENST00000491407	ARHGAP31	Q2M1Z3	1444 aa		42.36	■■■■■ 4.37
PPP1R35-205	ENST00000491407	PRDM15	P57071	1507 aa	Predicted RBP	42.36	■■■■■ 4.37
PPP1R35-205	ENST00000491407	KIF15	Q9NS87	1388 aa		42.35	■■■■■ 4.37
PPP1R35-205	ENST00000491407	XIRP1	Q702N8	1843 aa	Known RBP	42.34	■■■■■ 4.37
PPP1R35-205	ENST00000491407	EID1	Q9Y6B2	187 aa		42.33	■■■■■ 4.37
PPP1R35-205	ENST00000491407	CROCC2	H7BZ55	1655 aa		42.31	■■■■■ 4.36
PPP1R35-205	ENST00000491407	ERBIN	Q96RT1	1412 aa		42.3	■■■■■ 4.36
PPP1R35-205	ENST00000491407	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	42.3	■■■■■ 4.36
PPP1R35-205	ENST00000491407	RRP7BP	Q9NSQ0	103 aa		42.3	■■■■■ 4.36
PPP1R35-205	ENST00000491407	PIK3C2B	O00750	1634 aa		42.3	■■■■■ 4.36
PPP1R35-205	ENST00000491407	ABCC5	O15440	1437 aa		42.26	■■■■■ 4.36
PPP1R35-205	ENST00000491407	STAG3	Q9UJ98	1225 aa		42.25	■■■■■ 4.35
PPP1R35-205	ENST00000491407	PTPN23	Q9H3S7	1636 aa		42.22	■■■■■ 4.35
PPP1R35-205	ENST00000491407	TMEM2	Q9UHN6	1383 aa		42.22	■■■■■ 4.35
PPP1R35-205	ENST00000491407	KANK1	Q14678	1352 aa		42.21	■■■■■ 4.35
PPP1R35-205	ENST00000491407	DAPK1	P53355	1430 aa		42.15	■■■■■ 4.34
PPP1R35-205	ENST00000491407	KDM5A	P29375	1690 aa	Known RBP	42.15	■■■■■ 4.34
PPP1R35-205	ENST00000491407	EFCAB6	Q5THR3	1501 aa		42.14	■■■■■ 4.34
PPP1R35-205	ENST00000491407	RGS17	Q9UGC6	210 aa	Predicted RBP	42.13	■■■■■ 4.33
PPP1R35-205	ENST00000491407	IDI1	Q13907	227 aa		42.11	■■■■■ 4.33
PPP1R35-205	ENST00000491407	FAM135B	Q49AJ0	1406 aa		42.11	■■■■■ 4.33
PPP1R35-205	ENST00000491407	TMEM94	Q12767	1356 aa		42.09	■■■■■ 4.33
PPP1R35-205	ENST00000491407	LMTK2	Q8IWU2	1503 aa		42.06	■■■■■ 4.32
PPP1R35-205	ENST00000491407	KCNA6	P17658	529 aa		42.06	■■■■■ 4.32
PPP1R35-205	ENST00000491407	CHIC2	Q9UKJ5	165 aa		42.06	■■■■■ 4.32
PPP1R35-205	ENST00000491407	ANKRD30A	Q9BXX3	1397 aa		42.04	■■■■■ 4.32
PPP1R35-205	ENST00000491407	SLC26A8	Q96RN1	970 aa		42.04	■■■■■ 4.32
PPP1R35-205	ENST00000491407	PROSER2	Q86WR7	435 aa	Predicted RBP	42.03	■■■■■ 4.32
PPP1R35-205	ENST00000491407	TET3	O43151	1660 aa		42.02	■■■■■ 4.32
PPP1R35-205	ENST00000491407	FGD6	Q6ZV73	1430 aa		42.02	■■■■■ 4.32
PPP1R35-205	ENST00000491407	ROBO1	Q9Y6N7	1651 aa		42	■■■■■ 4.31
PPP1R35-205	ENST00000491407	RBM33	Q96EV2	1170 aa	Known RBP	41.99	■■■■■ 4.31
PPP1R35-205	ENST00000491407	ADGRB3	O60242	1522 aa		41.96	■■■■■ 4.31
PPP1R35-205	ENST00000491407	NOS1	P29475	1434 aa		41.95	■■■■■ 4.31
PPP1R35-205	ENST00000491407	BCAN	Q96GW7	911 aa		41.92	■■■■■ 4.3
PPP1R35-205	ENST00000491407	NKTR	P30414	1462 aa	Known RBP	41.9	■■■■■ 4.3
PPP1R35-205	ENST00000491407	NWD1	Q149M9	1564 aa		41.89	■■■■■ 4.3
PPP1R35-205	ENST00000491407	SLC52A1	Q9NWF4	448 aa		41.89	■■■■■ 4.3

Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms