RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 CAMSAP2Q08AD1 1489 aa13.55□□□□□ -0.24
APOBEC3F-204ENST00000491387 ARHGEF5Q12774 1597 aa13.55□□□□□ -0.24
APOBEC3F-204ENST00000491387 ILDR2Q71H61 639 aa13.55□□□□□ -0.24
APOBEC3F-204ENST00000491387 KDM5DQ9BY66 1539 aa13.54□□□□□ -0.24
APOBEC3F-204ENST00000491387 KIF3BO15066 747 aa13.53□□□□□ -0.24
APOBEC3F-204ENST00000491387 TNRQ92752 1358 aa13.53□□□□□ -0.24
APOBEC3F-204ENST00000491387 SOCS7O14512 581 aa13.52□□□□□ -0.25
APOBEC3F-204ENST00000491387 FBXO31Q5XUX0 539 aaPredicted RBP13.52□□□□□ -0.25
APOBEC3F-204ENST00000491387 SPATA31D1Q6ZQQ2 1576 aa13.52□□□□□ -0.25
APOBEC3F-204ENST00000491387 NLRP1Q9C000 1473 aa13.51□□□□□ -0.25
APOBEC3F-204ENST00000491387 WASHC2CQ9Y4E1 1318 aa13.51□□□□□ -0.25
APOBEC3F-204ENST00000491387 NEURL4Q96JN8 1562 aa13.5□□□□□ -0.25
APOBEC3F-204ENST00000491387 MIA2Q96PC5 1412 aa13.5□□□□□ -0.25
APOBEC3F-204ENST00000491387 LOC105371045A0A1W2PR82 267 aa13.5□□□□□ -0.25
APOBEC3F-204ENST00000491387 UBAP1LF5GYI3 381 aa13.5□□□□□ -0.25
APOBEC3F-204ENST00000491387 TSPY4P0CV99 314 aa13.5□□□□□ -0.25
APOBEC3F-204ENST00000491387 TSPY10P0CW01 314 aa13.5□□□□□ -0.25
APOBEC3F-204ENST00000491387 POLR1AO95602 1720 aaPredicted RBP13.49□□□□□ -0.25
APOBEC3F-204ENST00000491387 MAST1Q9Y2H9 1570 aa13.49□□□□□ -0.25
APOBEC3F-204ENST00000491387 CPS1P31327 1500 aa13.49□□□□□ -0.25
APOBEC3F-204ENST00000491387 MAP3K1Q13233 1512 aa13.49□□□□□ -0.25
APOBEC3F-204ENST00000491387 MED14O60244 1454 aa13.48□□□□□ -0.25
APOBEC3F-204ENST00000491387 LRRC9Q6ZRR7 1453 aa13.48□□□□□ -0.25
APOBEC3F-204ENST00000491387 VPS8Q8N3P4 1428 aa13.48□□□□□ -0.25
APOBEC3F-204ENST00000491387 THEMISQ8N1K5 641 aaPredicted RBP13.48□□□□□ -0.25
APOBEC3F-204ENST00000491387 RNF17Q9BXT8 1623 aaKnown RBP13.48□□□□□ -0.25
APOBEC3F-204ENST00000491387 ANKLE2Q86XL3 938 aa13.47□□□□□ -0.25
APOBEC3F-204ENST00000491387 SHANK2Q9UPX8 1470 aa13.47□□□□□ -0.25
APOBEC3F-204ENST00000491387 DEPDC5O75140 1603 aa13.46□□□□□ -0.25
APOBEC3F-204ENST00000491387 EIF2AK4Q9P2K8 1649 aaKnown RBP13.45□□□□□ -0.26
APOBEC3F-204ENST00000491387 VWDEQ8N2E2 1590 aa13.45□□□□□ -0.26
APOBEC3F-204ENST00000491387 UGGT1Q9NYU2 1555 aa13.45□□□□□ -0.26
APOBEC3F-204ENST00000491387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.45□□□□□ -0.26
APOBEC3F-204ENST00000491387 ABCC3O15438 1527 aa13.44□□□□□ -0.26
APOBEC3F-204ENST00000491387 ZC3H13Q5T200 1668 aaKnown RBP13.44□□□□□ -0.26
APOBEC3F-204ENST00000491387 NPHP4O75161 1426 aaPredicted RBP13.42□□□□□ -0.26
APOBEC3F-204ENST00000491387 MYOM3Q5VTT5 1437 aa13.42□□□□□ -0.26
APOBEC3F-204ENST00000491387 TOM1O60784 492 aa13.42□□□□□ -0.26
APOBEC3F-204ENST00000491387 MROH1Q8NDA8 1641 aa13.42□□□□□ -0.26
APOBEC3F-204ENST00000491387 ERVK-7P63135 1459 aa13.41□□□□□ -0.26
APOBEC3F-204ENST00000491387 KANK4Q5T7N3 995 aaPredicted RBP13.4□□□□□ -0.26
APOBEC3F-204ENST00000491387 ARHGAP31Q2M1Z3 1444 aa13.39□□□□□ -0.27
APOBEC3F-204ENST00000491387 DUOX2Q9NRD8 1548 aa13.39□□□□□ -0.27
APOBEC3F-204ENST00000491387 IQGAP1P46940 1657 aa13.38□□□□□ -0.27
APOBEC3F-204ENST00000491387 ALKQ9UM73 1620 aa13.38□□□□□ -0.27
APOBEC3F-204ENST00000491387 HSPA1LP34931 641 aa13.37□□□□□ -0.27
APOBEC3F-204ENST00000491387 PRDM15P57071 1507 aaPredicted RBP13.36□□□□□ -0.27
APOBEC3F-204ENST00000491387 ERBINQ96RT1 1412 aa13.36□□□□□ -0.27
APOBEC3F-204ENST00000491387 ARHGAP23Q9P227 1491 aa13.36□□□□□ -0.27
APOBEC3F-204ENST00000491387 UBR1Q8IWV7 1749 aa13.35□□□□□ -0.27
APOBEC3F-204ENST00000491387 SLIT1O75093 1534 aa13.34□□□□□ -0.27
APOBEC3F-204ENST00000491387 LRRC7Q96NW7 1537 aa13.34□□□□□ -0.27
APOBEC3F-204ENST00000491387 KIF15Q9NS87 1388 aa13.34□□□□□ -0.27
APOBEC3F-204ENST00000491387 ABCC5O15440 1437 aa13.34□□□□□ -0.27
APOBEC3F-204ENST00000491387 PIP4K2BP78356 416 aa13.34□□□□□ -0.27
APOBEC3F-204ENST00000491387 STRCP1A6NGW2 1772 aa13.34□□□□□ -0.27
APOBEC3F-204ENST00000491387 CROCC2H7BZ55 1655 aa13.34□□□□□ -0.27
APOBEC3F-204ENST00000491387 CEP152O94986 1710 aa13.33□□□□□ -0.27
APOBEC3F-204ENST00000491387 SYNMO15061 1565 aa13.33□□□□□ -0.28
APOBEC3F-204ENST00000491387 SCAF11Q99590 1463 aaKnown RBP13.33□□□□□ -0.28
APOBEC3F-204ENST00000491387 MED1Q15648 1581 aaPredicted RBP13.32□□□□□ -0.28
APOBEC3F-204ENST00000491387 CFAP65Q6ZU64 1925 aaKnown RBP13.32□□□□□ -0.28
APOBEC3F-204ENST00000491387 LTKP29376 864 aa13.31□□□□□ -0.28
APOBEC3F-204ENST00000491387 SCAF1Q9H7N4 1312 aaKnown RBP13.31□□□□□ -0.28
APOBEC3F-204ENST00000491387 LMTK2Q8IWU2 1503 aa13.3□□□□□ -0.28
APOBEC3F-204ENST00000491387 PTPN23Q9H3S7 1636 aa13.3□□□□□ -0.28
APOBEC3F-204ENST00000491387 KDM5AP29375 1690 aaKnown RBP13.3□□□□□ -0.28
APOBEC3F-204ENST00000491387 DAPK1P53355 1430 aa13.3□□□□□ -0.28
APOBEC3F-204ENST00000491387 TXNDC2Q86VQ3 553 aa13.28□□□□□ -0.28
APOBEC3F-204ENST00000491387 RRP7BPQ9NSQ0 103 aa13.28□□□□□ -0.28
APOBEC3F-204ENST00000491387 TMEM2Q9UHN6 1383 aa13.28□□□□□ -0.28
APOBEC3F-204ENST00000491387 FGD6Q6ZV73 1430 aa13.28□□□□□ -0.28
APOBEC3F-204ENST00000491387 EID1Q9Y6B2 187 aa13.27□□□□□ -0.29
APOBEC3F-204ENST00000491387 KANK1Q14678 1352 aa13.27□□□□□ -0.29
APOBEC3F-204ENST00000491387 ANKRD30AQ9BXX3 1397 aa13.26□□□□□ -0.29
APOBEC3F-204ENST00000491387 PIK3C2BO00750 1634 aa13.25□□□□□ -0.29
APOBEC3F-204ENST00000491387 NOS1P29475 1434 aa13.25□□□□□ -0.29
APOBEC3F-204ENST00000491387 APLP2Q06481 763 aa13.25□□□□□ -0.29
APOBEC3F-204ENST00000491387 IDI1Q13907 227 aa13.24□□□□□ -0.29
APOBEC3F-204ENST00000491387 XIRP1Q702N8 1843 aaKnown RBP13.24□□□□□ -0.29
APOBEC3F-204ENST00000491387 EFCAB6Q5THR3 1501 aa13.23□□□□□ -0.29
APOBEC3F-204ENST00000491387 ADGRL2O95490 1459 aa13.23□□□□□ -0.29
APOBEC3F-204ENST00000491387 TET3O43151 1660 aa13.23□□□□□ -0.29
APOBEC3F-204ENST00000491387 FAM135BQ49AJ0 1406 aa13.22□□□□□ -0.29
APOBEC3F-204ENST00000491387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.22□□□□□ -0.29
APOBEC3F-204ENST00000491387 SLC52A1Q9NWF4 448 aa13.22□□□□□ -0.29
APOBEC3F-204ENST00000491387 KCNA6P17658 529 aa13.21□□□□□ -0.29
APOBEC3F-204ENST00000491387 RPRD2Q5VT52 1461 aaKnown RBP13.2□□□□□ -0.3
APOBEC3F-204ENST00000491387 STAG3Q9UJ98 1225 aa13.19□□□□□ -0.3
APOBEC3F-204ENST00000491387 CHIC2Q9UKJ5 165 aa13.19□□□□□ -0.3
APOBEC3F-204ENST00000491387 PHF23Q9BUL5 403 aaPredicted RBP13.18□□□□□ -0.3
APOBEC3F-204ENST00000491387 TMEM94Q12767 1356 aa13.18□□□□□ -0.3
APOBEC3F-204ENST00000491387 ADGRB3O60242 1522 aa13.18□□□□□ -0.3
APOBEC3F-204ENST00000491387 NKTRP30414 1462 aaKnown RBP13.17□□□□□ -0.3
APOBEC3F-204ENST00000491387 NWD1Q149M9 1564 aa13.17□□□□□ -0.3
APOBEC3F-204ENST00000491387 ANKRD50Q9ULJ7 1429 aa13.16□□□□□ -0.3
APOBEC3F-204ENST00000491387 ZFYVE9O95405 1425 aa13.15□□□□□ -0.3
APOBEC3F-204ENST00000491387 RGS17Q9UGC6 210 aaPredicted RBP13.15□□□□□ -0.3
APOBEC3F-204ENST00000491387 SLC26A8Q96RN1 970 aa13.14□□□□□ -0.31
APOBEC3F-204ENST00000491387 PLEKHG1Q9ULL1 1385 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms