RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 MAST1Q9Y2H9 1570 aa12.5□□□□□ -0.41
RNF38-209ENST00000491349 ARID4BQ4LE39 1312 aaPredicted RBP12.49□□□□□ -0.41
RNF38-209ENST00000491349 KIDINS220Q9ULH0 1771 aa12.48□□□□□ -0.41
RNF38-209ENST00000491349 ATP10AO60312 1499 aa12.48□□□□□ -0.41
RNF38-209ENST00000491349 ABCC5O15440 1437 aa12.47□□□□□ -0.41
RNF38-209ENST00000491349 PLXNC1O60486 1568 aa12.47□□□□□ -0.41
RNF38-209ENST00000491349 ESF1Q9H501 851 aaKnown RBP12.46□□□□□ -0.41
RNF38-209ENST00000491349 CHIC2Q9UKJ5 165 aa12.46□□□□□ -0.41
RNF38-209ENST00000491349 ABCA6Q8N139 1617 aa12.45□□□□□ -0.42
RNF38-209ENST00000491349 DIP2CQ9Y2E4 1556 aa12.45□□□□□ -0.42
RNF38-209ENST00000491349 REREQ9P2R6 1566 aa12.44□□□□□ -0.42
RNF38-209ENST00000491349 DUOX2Q9NRD8 1548 aa12.44□□□□□ -0.42
RNF38-209ENST00000491349 A2MP01023 1474 aa12.44□□□□□ -0.42
RNF38-209ENST00000491349 YEATS2Q9ULM3 1422 aa12.44□□□□□ -0.42
RNF38-209ENST00000491349 KIF15Q9NS87 1388 aa12.43□□□□□ -0.42
RNF38-209ENST00000491349 RRP7BPQ9NSQ0 103 aa12.43□□□□□ -0.42
RNF38-209ENST00000491349 ROCK1Q13464 1354 aa12.43□□□□□ -0.42
RNF38-209ENST00000491349 ACIN1Q9UKV3 1341 aaKnown RBP12.42□□□□□ -0.42
RNF38-209ENST00000491349 ADGRL2O95490 1459 aa12.42□□□□□ -0.42
RNF38-209ENST00000491349 TRIM26Q12899 539 aaPredicted RBP12.41□□□□□ -0.42
RNF38-209ENST00000491349 DHX29Q7Z478 1369 aaKnown RBP12.41□□□□□ -0.42
RNF38-209ENST00000491349 EIF2AK4Q9P2K8 1649 aaKnown RBP12.4□□□□□ -0.42
RNF38-209ENST00000491349 NCOA1Q15788 1441 aa12.4□□□□□ -0.42
RNF38-209ENST00000491349 ERBINQ96RT1 1412 aa12.4□□□□□ -0.42
RNF38-209ENST00000491349 AGLP35573 1532 aa12.39□□□□□ -0.43
RNF38-209ENST00000491349 KANK1Q14678 1352 aa12.39□□□□□ -0.43
RNF38-209ENST00000491349 KIF3BO15066 747 aa12.38□□□□□ -0.43
RNF38-209ENST00000491349 ZBTB22O15209 634 aa12.38□□□□□ -0.43
RNF38-209ENST00000491349 POLA2Q14181 598 aa12.38□□□□□ -0.43
RNF38-209ENST00000491349 MLECQ14165 292 aa12.37□□□□□ -0.43
RNF38-209ENST00000491349 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
RNF38-209ENST00000491349 GCC2Q8IWJ2 1684 aa12.37□□□□□ -0.43
RNF38-209ENST00000491349 ANKRD50Q9ULJ7 1429 aa12.37□□□□□ -0.43
RNF38-209ENST00000491349 GGT6Q6P531 493 aa12.36□□□□□ -0.43
RNF38-209ENST00000491349 BCORL1Q5H9F3 1711 aa12.36□□□□□ -0.43
RNF38-209ENST00000491349 FER1L4A9Z1Z3 1794 aa12.34□□□□□ -0.43
RNF38-209ENST00000491349 FAM135AQ9P2D6 1515 aa12.34□□□□□ -0.43
RNF38-209ENST00000491349 HFM1A2PYH4 1435 aa12.34□□□□□ -0.43
RNF38-209ENST00000491349 PTPRKQ15262 1439 aa12.34□□□□□ -0.43
RNF38-209ENST00000491349 CNTLNQ9NXG0 1405 aa12.33□□□□□ -0.44
RNF38-209ENST00000491349 ZC3H13Q5T200 1668 aaKnown RBP12.32□□□□□ -0.44
RNF38-209ENST00000491349 RNF17Q9BXT8 1623 aaKnown RBP12.32□□□□□ -0.44
RNF38-209ENST00000491349 WASHC2CQ9Y4E1 1318 aa12.32□□□□□ -0.44
RNF38-209ENST00000491349 SETD5Q9C0A6 1442 aa12.31□□□□□ -0.44
RNF38-209ENST00000491349 NAIPQ13075 1403 aa12.3□□□□□ -0.44
RNF38-209ENST00000491349 TRIM52Q96A61 297 aa12.3□□□□□ -0.44
RNF38-209ENST00000491349 KDM5DQ9BY66 1539 aa12.29□□□□□ -0.44
RNF38-209ENST00000491349 DEPDC5O75140 1603 aa12.29□□□□□ -0.44
RNF38-209ENST00000491349 MROH2AA6NES4 1674 aa12.29□□□□□ -0.44
RNF38-209ENST00000491349 ADAMTSL3P82987 1691 aa12.29□□□□□ -0.44
RNF38-209ENST00000491349 RIMS1Q86UR5 1692 aaKnown RBP12.29□□□□□ -0.44
RNF38-209ENST00000491349 SIGLEC1Q9BZZ2 1709 aa12.28□□□□□ -0.44
RNF38-209ENST00000491349 MADDQ8WXG6 1647 aa12.28□□□□□ -0.44
RNF38-209ENST00000491349 CLTCQ00610 1675 aaKnown RBP12.28□□□□□ -0.44
RNF38-209ENST00000491349 PRDM15P57071 1507 aaPredicted RBP12.27□□□□□ -0.44
RNF38-209ENST00000491349 UNC13BO14795 1591 aa12.27□□□□□ -0.44
RNF38-209ENST00000491349 NUP155O75694 1391 aa12.26□□□□□ -0.45
RNF38-209ENST00000491349 CEP152O94986 1710 aa12.25□□□□□ -0.45
RNF38-209ENST00000491349 HRCP23327 699 aa12.25□□□□□ -0.45
RNF38-209ENST00000491349 POTEHQ6S545 545 aa12.25□□□□□ -0.45
RNF38-209ENST00000491349 IQGAP3Q86VI3 1631 aa12.24□□□□□ -0.45
RNF38-209ENST00000491349 CAMSAP1Q5T5Y3 1602 aa12.23□□□□□ -0.45
RNF38-209ENST00000491349 RAB3GAP2Q9H2M9 1393 aa12.23□□□□□ -0.45
RNF38-209ENST00000491349 RBM42Q9BTD8 480 aaKnown RBP12.23□□□□□ -0.45
RNF38-209ENST00000491349 TET3O43151 1660 aa12.22□□□□□ -0.45
RNF38-209ENST00000491349 ABCC3O15438 1527 aa12.22□□□□□ -0.45
RNF38-209ENST00000491349 ZMYM3Q14202 1370 aa12.22□□□□□ -0.45
RNF38-209ENST00000491349 PCGF6Q9BYE7 350 aa12.22□□□□□ -0.45
RNF38-209ENST00000491349 MROH1Q8NDA8 1641 aa12.22□□□□□ -0.45
RNF38-209ENST00000491349 C3P01024 1663 aa12.21□□□□□ -0.45
RNF38-209ENST00000491349 LMTK2Q8IWU2 1503 aa12.21□□□□□ -0.46
RNF38-209ENST00000491349 PTPRMP28827 1452 aa12.21□□□□□ -0.46
RNF38-209ENST00000491349 RPRD2Q5VT52 1461 aaKnown RBP12.2□□□□□ -0.46
RNF38-209ENST00000491349 VWDEQ8N2E2 1590 aa12.19□□□□□ -0.46
RNF38-209ENST00000491349 KDM4FA0A1W2PPD8 638 aa12.19□□□□□ -0.46
RNF38-209ENST00000491349 SETD1BQ9UPS6 1966 aaKnown RBP12.19□□□□□ -0.46
RNF38-209ENST00000491349 PZPP20742 1482 aa12.19□□□□□ -0.46
RNF38-209ENST00000491349 CFAP65Q6ZU64 1925 aaKnown RBP12.19□□□□□ -0.46
RNF38-209ENST00000491349 EFCAB6Q5THR3 1501 aa12.18□□□□□ -0.46
RNF38-209ENST00000491349 NPATQ14207 1427 aa12.18□□□□□ -0.46
RNF38-209ENST00000491349 ARHGAP31Q2M1Z3 1444 aa12.18□□□□□ -0.46
RNF38-209ENST00000491349 PREX1Q8TCU6 1659 aa12.16□□□□□ -0.46
RNF38-209ENST00000491349 PKD2Q13563 968 aa12.15□□□□□ -0.46
RNF38-209ENST00000491349 MPHOSPH9Q99550 1183 aa12.15□□□□□ -0.46
RNF38-209ENST00000491349 STAG3Q9UJ98 1225 aa12.15□□□□□ -0.46
RNF38-209ENST00000491349 E9PCH4 1651 aa12.14□□□□□ -0.47
RNF38-209ENST00000491349 ATXN8OSP0DMR3 200 aa12.14□□□□□ -0.47
RNF38-209ENST00000491349 CEBPAP49715 358 aaPredicted RBP12.14□□□□□ -0.47
RNF38-209ENST00000491349 TNRQ92752 1358 aa12.14□□□□□ -0.47
RNF38-209ENST00000491349 SPHKAPQ2M3C7 1700 aa12.14□□□□□ -0.47
RNF38-209ENST00000491349 UHRF1BP1Q6BDS2 1440 aa12.13□□□□□ -0.47
RNF38-209ENST00000491349 ERVK-7P63135 1459 aa12.13□□□□□ -0.47
RNF38-209ENST00000491349 SLC52A1Q9NWF4 448 aa12.12□□□□□ -0.47
RNF38-209ENST00000491349 SPATA31D1Q6ZQQ2 1576 aa12.12□□□□□ -0.47
RNF38-209ENST00000491349 NLRP1Q9C000 1473 aa12.11□□□□□ -0.47
RNF38-209ENST00000491349 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
RNF38-209ENST00000491349 FBXO31Q5XUX0 539 aaPredicted RBP12.1□□□□□ -0.47
RNF38-209ENST00000491349 MYO3AQ8NEV4 1616 aa12.1□□□□□ -0.47
RNF38-209ENST00000491349 KIF1BO60333 1816 aa12.09□□□□□ -0.47
RNF38-209ENST00000491349 HDGFP51858 240 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms