RNA–Protein interactions for RNA: ENST00000491203.5

CNOT4-210, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-210ENST00000491203 TRIM35Q9UPQ4 493 aa13.14□□□□□ -0.31
CNOT4-210ENST00000491203 COLQQ9Y215 455 aaPredicted RBP13.13□□□□□ -0.31
CNOT4-210ENST00000491203 PPARGC1BQ86YN6 1023 aaKnown RBP13.12□□□□□ -0.31
CNOT4-210ENST00000491203 TMEM106CQ9BVX2 250 aa13.12□□□□□ -0.31
CNOT4-210ENST00000491203 SUPT6HQ7KZ85 1726 aaKnown RBP13.12□□□□□ -0.31
CNOT4-210ENST00000491203 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.12□□□□□ -0.31
CNOT4-210ENST00000491203 ABCA9Q8IUA7 1624 aa13.11□□□□□ -0.31
CNOT4-210ENST00000491203 CD109Q6YHK3 1445 aa13.11□□□□□ -0.31
CNOT4-210ENST00000491203 KIF13AQ9H1H9 1805 aa13.11□□□□□ -0.31
CNOT4-210ENST00000491203 NCOA2Q15596 1464 aa13.1□□□□□ -0.31
CNOT4-210ENST00000491203 CHRM1P11229 460 aaPredicted RBP13.1□□□□□ -0.31
CNOT4-210ENST00000491203 TTC37Q6PGP7 1564 aa13.1□□□□□ -0.31
CNOT4-210ENST00000491203 CCNB3Q8WWL7 1395 aa13.09□□□□□ -0.31
CNOT4-210ENST00000491203 MAP3K4Q9Y6R4 1608 aa13.09□□□□□ -0.31
CNOT4-210ENST00000491203 PLCH2O75038 1416 aa13.06□□□□□ -0.32
CNOT4-210ENST00000491203 GPATCH8Q9UKJ3 1502 aaKnown RBP13.06□□□□□ -0.32
CNOT4-210ENST00000491203 MYO5CQ9NQX4 1742 aa13.05□□□□□ -0.32
CNOT4-210ENST00000491203 IER5LQ5T953 404 aa13.04□□□□□ -0.32
CNOT4-210ENST00000491203 EFCAB2Q5VUJ9 269 aa13.04□□□□□ -0.32
CNOT4-210ENST00000491203 CFDP1Q9UEE9 299 aaPredicted RBP13.04□□□□□ -0.32
CNOT4-210ENST00000491203 PHLDB1Q86UU1 1377 aa13.04□□□□□ -0.32
CNOT4-210ENST00000491203 TSPOAP1O95153 1857 aa13.04□□□□□ -0.32
CNOT4-210ENST00000491203 TEX14Q8IWB6 1497 aa13.04□□□□□ -0.32
CNOT4-210ENST00000491203 ARHGAP5Q13017 1502 aa13.03□□□□□ -0.32
CNOT4-210ENST00000491203 ARAP3Q8WWN8 1544 aa13.03□□□□□ -0.32
CNOT4-210ENST00000491203 PREX2Q70Z35 1606 aa13.03□□□□□ -0.32
CNOT4-210ENST00000491203 CIZ1Q9ULV3 898 aaPredicted RBP13.03□□□□□ -0.32
CNOT4-210ENST00000491203 MYOM3Q5VTT5 1437 aa13.03□□□□□ -0.32
CNOT4-210ENST00000491203 ITSN2Q9NZM3 1697 aa13.02□□□□□ -0.32
CNOT4-210ENST00000491203 CDC42BPAQ5VT25 1732 aa13.02□□□□□ -0.32
CNOT4-210ENST00000491203 FANCAO15360 1455 aa13.02□□□□□ -0.33
CNOT4-210ENST00000491203 ZNF777Q9ULD5 760 aaPredicted RBP13.01□□□□□ -0.33
CNOT4-210ENST00000491203 PPRC1Q5VV67 1664 aaKnown RBP13.01□□□□□ -0.33
CNOT4-210ENST00000491203 CDC42BPBQ9Y5S2 1711 aa13□□□□□ -0.33
CNOT4-210ENST00000491203 NEO1Q92859 1461 aa13□□□□□ -0.33
CNOT4-210ENST00000491203 MIA2Q96PC5 1412 aa13□□□□□ -0.33
CNOT4-210ENST00000491203 CFAP74Q9C0B2 1584 aa12.99□□□□□ -0.33
CNOT4-210ENST00000491203 ZNF467Q7Z7K2 595 aaPredicted RBP12.99□□□□□ -0.33
CNOT4-210ENST00000491203 FGD6Q6ZV73 1430 aa12.98□□□□□ -0.33
CNOT4-210ENST00000491203 AKNAQ7Z591 1439 aa12.98□□□□□ -0.33
CNOT4-210ENST00000491203 IRX5P78411 483 aaPredicted RBP12.98□□□□□ -0.33
CNOT4-210ENST00000491203 PLEKHH2Q8IVE3 1493 aa12.97□□□□□ -0.33
CNOT4-210ENST00000491203 ZNF644Q9H582 1327 aaPredicted RBP12.96□□□□□ -0.33
CNOT4-210ENST00000491203 SEC24BO95487 1268 aa12.96□□□□□ -0.33
CNOT4-210ENST00000491203 ADGRL1O94910 1474 aa12.96□□□□□ -0.34
CNOT4-210ENST00000491203 SAMD9LQ8IVG5 1584 aa12.95□□□□□ -0.34
CNOT4-210ENST00000491203 CAMSAP2Q08AD1 1489 aa12.95□□□□□ -0.34
CNOT4-210ENST00000491203 PTPN23Q9H3S7 1636 aa12.95□□□□□ -0.34
CNOT4-210ENST00000491203 FAM50AQ14320 339 aaKnown RBP12.94□□□□□ -0.34
CNOT4-210ENST00000491203 SCAPERQ9BY12 1400 aa12.94□□□□□ -0.34
CNOT4-210ENST00000491203 KIAA1107Q9UPP5 1409 aa12.94□□□□□ -0.34
CNOT4-210ENST00000491203 ABCC1P33527 1531 aa12.93□□□□□ -0.34
CNOT4-210ENST00000491203 TCOF1Q13428 1488 aaKnown RBP12.93□□□□□ -0.34
CNOT4-210ENST00000491203 PSEN1P49768 467 aa12.93□□□□□ -0.34
CNOT4-210ENST00000491203 DENND4BO75064 1496 aaPredicted RBP12.92□□□□□ -0.34
CNOT4-210ENST00000491203 HNRNPMP52272 730 aaKnown RBP eCLIP12.92□□□□□ -0.34
CNOT4-210ENST00000491203 RRBP1Q9P2E9 1410 aaKnown RBP12.92□□□□□ -0.34
CNOT4-210ENST00000491203 SYCP2Q9BX26 1530 aa12.92□□□□□ -0.34
CNOT4-210ENST00000491203 MAMSTRQ6ZN01 415 aa12.91□□□□□ -0.34
CNOT4-210ENST00000491203 ARHGEF12Q9NZN5 1544 aa12.91□□□□□ -0.34
CNOT4-210ENST00000491203 RSPH4AQ5TD94 716 aa12.9□□□□□ -0.34
CNOT4-210ENST00000491203 POGZQ7Z3K3 1410 aa12.89□□□□□ -0.35
CNOT4-210ENST00000491203 TRAPPC8Q9Y2L5 1435 aa12.89□□□□□ -0.35
CNOT4-210ENST00000491203 KDM6BO15054 1643 aa12.89□□□□□ -0.35
CNOT4-210ENST00000491203 RAPGEF3O95398 923 aa12.89□□□□□ -0.35
CNOT4-210ENST00000491203 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.89□□□□□ -0.35
CNOT4-210ENST00000491203 MBD5Q9P267 1494 aa12.89□□□□□ -0.35
CNOT4-210ENST00000491203 COL17A1Q9UMD9 1497 aaPredicted RBP12.89□□□□□ -0.35
CNOT4-210ENST00000491203 AFAP1Q8N556 730 aa12.88□□□□□ -0.35
CNOT4-210ENST00000491203 CCDC141Q6ZP82 1450 aa12.88□□□□□ -0.35
CNOT4-210ENST00000491203 ARHGEF5Q12774 1597 aa12.87□□□□□ -0.35
CNOT4-210ENST00000491203 ZNF518AQ6AHZ1 1483 aa12.87□□□□□ -0.35
CNOT4-210ENST00000491203 PLCG2P16885 1265 aa12.87□□□□□ -0.35
CNOT4-210ENST00000491203 PDAP1Q13442 181 aaKnown RBP12.87□□□□□ -0.35
CNOT4-210ENST00000491203 SCUBE2Q9NQ36 999 aa12.87□□□□□ -0.35
CNOT4-210ENST00000491203 TSPY4P0CV99 314 aa12.86□□□□□ -0.35
CNOT4-210ENST00000491203 TSPY10P0CW01 314 aa12.86□□□□□ -0.35
CNOT4-210ENST00000491203 RNF25Q96BH1 459 aaPredicted RBP12.86□□□□□ -0.35
CNOT4-210ENST00000491203 OCEL1Q9H607 264 aa12.86□□□□□ -0.35
CNOT4-210ENST00000491203 ABCC5O15440 1437 aa12.86□□□□□ -0.35
CNOT4-210ENST00000491203 SPAG9O60271 1321 aaKnown RBP12.86□□□□□ -0.35
CNOT4-210ENST00000491203 PDCD7Q8N8D1 485 aaKnown RBP12.85□□□□□ -0.35
CNOT4-210ENST00000491203 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
CNOT4-210ENST00000491203 DAPK1P53355 1430 aa12.85□□□□□ -0.35
CNOT4-210ENST00000491203 FRMPD1Q5SYB0 1578 aa12.85□□□□□ -0.35
CNOT4-210ENST00000491203 RICTORQ6R327 1708 aa12.85□□□□□ -0.35
CNOT4-210ENST00000491203 DNMT1P26358 1616 aaKnown RBP12.84□□□□□ -0.35
CNOT4-210ENST00000491203 ITGAEP38570 1179 aa12.84□□□□□ -0.35
CNOT4-210ENST00000491203 KDM5CP41229 1560 aa12.83□□□□□ -0.36
CNOT4-210ENST00000491203 ZMYM4Q5VZL5 1548 aa12.83□□□□□ -0.36
CNOT4-210ENST00000491203 C9orf84Q5VXU9 1444 aa12.82□□□□□ -0.36
CNOT4-210ENST00000491203 LCE2DQ5TA82 110 aaPredicted RBP12.82□□□□□ -0.36
CNOT4-210ENST00000491203 MLH3Q9UHC1 1453 aa12.82□□□□□ -0.36
CNOT4-210ENST00000491203 SHANK2Q9UPX8 1470 aa12.82□□□□□ -0.36
CNOT4-210ENST00000491203 MAGI2Q86UL8 1455 aa12.81□□□□□ -0.36
CNOT4-210ENST00000491203 HECW2Q9P2P5 1572 aa12.81□□□□□ -0.36
CNOT4-210ENST00000491203 RTEL1-TNFRSF6BF6WH68 1400 aa12.8□□□□□ -0.36
CNOT4-210ENST00000491203 CROCC2H7BZ55 1655 aa12.8□□□□□ -0.36
CNOT4-210ENST00000491203 ILDR1Q86SU0 546 aaPredicted RBP12.8□□□□□ -0.36
CNOT4-210ENST00000491203 CHIC2Q9UKJ5 165 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms