RNA–Protein interactions for RNA: ENST00000490970.5

ARHGEF39-206, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 1,270 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-206ENST00000490970 KDM5DQ9BY66 1539 aa25■■□□□ 1.59
ARHGEF39-206ENST00000490970 MYO3AQ8NEV4 1616 aa24.99■■□□□ 1.59
ARHGEF39-206ENST00000490970 TCOF1Q13428 1488 aaKnown RBP24.98■■□□□ 1.59
ARHGEF39-206ENST00000490970 NCOA1Q15788 1441 aa24.98■■□□□ 1.59
ARHGEF39-206ENST00000490970 CAMSAP1Q5T5Y3 1602 aa24.97■■□□□ 1.59
ARHGEF39-206ENST00000490970 DAPK1P53355 1430 aa24.97■■□□□ 1.59
ARHGEF39-206ENST00000490970 RRP7BPQ9NSQ0 103 aa24.97■■□□□ 1.59
ARHGEF39-206ENST00000490970 CERKQ8TCT0 537 aa24.96■■□□□ 1.59
ARHGEF39-206ENST00000490970 FAM135AQ9P2D6 1515 aa24.96■■□□□ 1.59
ARHGEF39-206ENST00000490970 DUOX2Q9NRD8 1548 aa24.95■■□□□ 1.58
ARHGEF39-206ENST00000490970 SHANK2Q9UPX8 1470 aa24.95■■□□□ 1.58
ARHGEF39-206ENST00000490970 PTPRTO14522 1441 aa24.95■■□□□ 1.58
ARHGEF39-206ENST00000490970 CROCC2H7BZ55 1655 aa24.94■■□□□ 1.58
ARHGEF39-206ENST00000490970 NCKAP5LQ9HCH0 1330 aa24.94■■□□□ 1.58
ARHGEF39-206ENST00000490970 CEP170BQ9Y4F5 1589 aaPredicted RBP24.94■■□□□ 1.58
ARHGEF39-206ENST00000490970 CHIC2Q9UKJ5 165 aa24.94■■□□□ 1.58
ARHGEF39-206ENST00000490970 PZPP20742 1482 aa24.94■■□□□ 1.58
ARHGEF39-206ENST00000490970 DNMT1P26358 1616 aaKnown RBP24.94■■□□□ 1.58
ARHGEF39-206ENST00000490970 RNF17Q9BXT8 1623 aaKnown RBP24.94■■□□□ 1.58
ARHGEF39-206ENST00000490970 TNRQ92752 1358 aa24.93■■□□□ 1.58
ARHGEF39-206ENST00000490970 KIF15Q9NS87 1388 aa24.93■■□□□ 1.58
ARHGEF39-206ENST00000490970 ZNF142P52746 1687 aaPredicted RBP24.93■■□□□ 1.58
ARHGEF39-206ENST00000490970 EIF2AK4Q9P2K8 1649 aaKnown RBP24.93■■□□□ 1.58
ARHGEF39-206ENST00000490970 FAM50AQ14320 339 aaKnown RBP24.9■■□□□ 1.58
ARHGEF39-206ENST00000490970 A2ML1A8K2U0 1454 aa24.89■■□□□ 1.58
ARHGEF39-206ENST00000490970 ABCC3O15438 1527 aa24.89■■□□□ 1.57
ARHGEF39-206ENST00000490970 MROH1Q8NDA8 1641 aa24.89■■□□□ 1.57
ARHGEF39-206ENST00000490970 PLA2R1Q13018 1463 aa24.85■■□□□ 1.57
ARHGEF39-206ENST00000490970 ANKRD30AQ9BXX3 1397 aa24.85■■□□□ 1.57
ARHGEF39-206ENST00000490970 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.85■■□□□ 1.576e-6■□□□□ 11
ARHGEF39-206ENST00000490970 ERBINQ96RT1 1412 aa24.85■■□□□ 1.57
ARHGEF39-206ENST00000490970 PKD2Q13563 968 aa24.84■■□□□ 1.57
ARHGEF39-206ENST00000490970 ZC3H13Q5T200 1668 aaKnown RBP24.84■■□□□ 1.57
ARHGEF39-206ENST00000490970 PPARGC1BQ86YN6 1023 aaKnown RBP24.83■■□□□ 1.57
ARHGEF39-206ENST00000490970 CEP152O94986 1710 aa24.83■■□□□ 1.57
ARHGEF39-206ENST00000490970 NLRP1Q9C000 1473 aa24.78■■□□□ 1.56
ARHGEF39-206ENST00000490970 CFAP65Q6ZU64 1925 aaKnown RBP24.78■■□□□ 1.56
ARHGEF39-206ENST00000490970 PRDM15P57071 1507 aaPredicted RBP24.77■■□□□ 1.56
ARHGEF39-206ENST00000490970 SPATA31D1Q6ZQQ2 1576 aa24.77■■□□□ 1.56
ARHGEF39-206ENST00000490970 LTBP4Q8N2S1 1624 aa24.77■■□□□ 1.56
ARHGEF39-206ENST00000490970 ERVK-7P63135 1459 aa24.77■■□□□ 1.56
ARHGEF39-206ENST00000490970 THEMISQ8N1K5 641 aaPredicted RBP24.76■■□□□ 1.55
ARHGEF39-206ENST00000490970 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.76■■□□□ 1.55
ARHGEF39-206ENST00000490970 ADGRL2O95490 1459 aa24.76■■□□□ 1.55
ARHGEF39-206ENST00000490970 ZNF335Q9H4Z2 1342 aaPredicted RBP24.75■■□□□ 1.55
ARHGEF39-206ENST00000490970 UGGT1Q9NYU2 1555 aa24.75■■□□□ 1.55
ARHGEF39-206ENST00000490970 KANK1Q14678 1352 aa24.74■■□□□ 1.55
ARHGEF39-206ENST00000490970 DEPDC5O75140 1603 aa24.74■■□□□ 1.55
ARHGEF39-206ENST00000490970 ANKLE2Q86XL3 938 aa24.72■■□□□ 1.55
ARHGEF39-206ENST00000490970 ARHGAP31Q2M1Z3 1444 aa24.71■■□□□ 1.55
ARHGEF39-206ENST00000490970 NEURL4Q96JN8 1562 aa24.68■■□□□ 1.54
ARHGEF39-206ENST00000490970 POLR1AO95602 1720 aaPredicted RBP24.68■■□□□ 1.54
ARHGEF39-206ENST00000490970 ANKRD50Q9ULJ7 1429 aa24.68■■□□□ 1.54
ARHGEF39-206ENST00000490970 ITGAEP38570 1179 aa24.66■■□□□ 1.54
ARHGEF39-206ENST00000490970 VWDEQ8N2E2 1590 aa24.66■■□□□ 1.54
ARHGEF39-206ENST00000490970 LMTK2Q8IWU2 1503 aa24.64■■□□□ 1.53
ARHGEF39-206ENST00000490970 NPHP4O75161 1426 aaPredicted RBP24.61■■□□□ 1.53
ARHGEF39-206ENST00000490970 UBR1Q8IWV7 1749 aa24.61■■□□□ 1.53
ARHGEF39-206ENST00000490970 MED14O60244 1454 aa24.59■■□□□ 1.53
ARHGEF39-206ENST00000490970 IQSEC2Q5JU85 1478 aa24.59■■□□□ 1.53
ARHGEF39-206ENST00000490970 ROCK1Q13464 1354 aa24.58■■□□□ 1.53
ARHGEF39-206ENST00000490970 IDI1Q13907 227 aa24.57■■□□□ 1.52
ARHGEF39-206ENST00000490970 EFCAB6Q5THR3 1501 aa24.56■■□□□ 1.52
ARHGEF39-206ENST00000490970 PIK3C2BO00750 1634 aa24.55■■□□□ 1.52
ARHGEF39-206ENST00000490970 STAG3Q9UJ98 1225 aa24.55■■□□□ 1.52
ARHGEF39-206ENST00000490970 LTKP29376 864 aa24.54■■□□□ 1.52
ARHGEF39-206ENST00000490970 TXNDC2Q86VQ3 553 aa24.54■■□□□ 1.52
ARHGEF39-206ENST00000490970 NOS1P29475 1434 aa24.53■■□□□ 1.52
ARHGEF39-206ENST00000490970 SYNMO15061 1565 aa24.53■■□□□ 1.52
ARHGEF39-206ENST00000490970 IQGAP1P46940 1657 aa24.53■■□□□ 1.52
ARHGEF39-206ENST00000490970 ARHGAP23Q9P227 1491 aa24.51■■□□□ 1.51
ARHGEF39-206ENST00000490970 UBAP1LF5GYI3 381 aa24.51■■□□□ 1.51
ARHGEF39-206ENST00000490970 SCAF11Q99590 1463 aaKnown RBP24.51■■□□□ 1.51
ARHGEF39-206ENST00000490970 SLIT1O75093 1534 aa24.51■■□□□ 1.51
ARHGEF39-206ENST00000490970 UNC13BO14795 1591 aa24.5■■□□□ 1.51
ARHGEF39-206ENST00000490970 TET3O43151 1660 aa24.48■■□□□ 1.51
ARHGEF39-206ENST00000490970 CPS1P31327 1500 aa24.48■■□□□ 1.51
ARHGEF39-206ENST00000490970 TMEM2Q9UHN6 1383 aa24.48■■□□□ 1.51
ARHGEF39-206ENST00000490970 EID1Q9Y6B2 187 aa24.48■■□□□ 1.51
ARHGEF39-206ENST00000490970 RPRD2Q5VT52 1461 aaKnown RBP24.47■■□□□ 1.51
ARHGEF39-206ENST00000490970 RRBP1Q9P2E9 1410 aaKnown RBP24.47■■□□□ 1.51
ARHGEF39-206ENST00000490970 SLC52A1Q9NWF4 448 aa24.47■■□□□ 1.51
ARHGEF39-206ENST00000490970 NUP155O75694 1391 aa24.44■■□□□ 1.5
ARHGEF39-206ENST00000490970 GCC2Q8IWJ2 1684 aa24.43■■□□□ 1.5
ARHGEF39-206ENST00000490970 KDM5AP29375 1690 aaKnown RBP24.42■■□□□ 1.5
ARHGEF39-206ENST00000490970 STRCP1A6NGW2 1772 aa24.41■■□□□ 1.5
ARHGEF39-206ENST00000490970 ADGRB3O60242 1522 aa24.4■■□□□ 1.5
ARHGEF39-206ENST00000490970 IQGAP3Q86VI3 1631 aa24.4■■□□□ 1.5
ARHGEF39-206ENST00000490970 E9PCH4 1651 aa24.4■■□□□ 1.5
ARHGEF39-206ENST00000490970 CHGAP10645 457 aaKnown RBP24.36■■□□□ 1.49
ARHGEF39-206ENST00000490970 TOM1O60784 492 aa24.35■■□□□ 1.49
ARHGEF39-206ENST00000490970 PIP4K2BP78356 416 aa24.35■■□□□ 1.49
ARHGEF39-206ENST00000490970 SLC26A8Q96RN1 970 aa24.35■■□□□ 1.49
ARHGEF39-206ENST00000490970 SENP3Q9H4L4 574 aaPredicted RBP24.35■■□□□ 1.49
ARHGEF39-206ENST00000490970 LRRC7Q96NW7 1537 aa24.35■■□□□ 1.49
ARHGEF39-206ENST00000490970 SCAF1Q9H7N4 1312 aaKnown RBP24.35■■□□□ 1.49
ARHGEF39-206ENST00000490970 MYO5BQ9ULV0 1848 aa24.33■■□□□ 1.48
ARHGEF39-206ENST00000490970 BCANQ96GW7 911 aa24.32■■□□□ 1.48
ARHGEF39-206ENST00000490970 NAIPQ13075 1403 aa24.32■■□□□ 1.48
ARHGEF39-206ENST00000490970 TMEM131LA2VDJ0 1609 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms