RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 PZPP20742 1482 aa13.67□□□□□ -0.22
PCOLCE-209ENST00000490909 ZNF335Q9H4Z2 1342 aaPredicted RBP13.67□□□□□ -0.22
PCOLCE-209ENST00000490909 MAST1Q9Y2H9 1570 aa13.66□□□□□ -0.22
PCOLCE-209ENST00000490909 NCKAP5LQ9HCH0 1330 aa13.66□□□□□ -0.22
PCOLCE-209ENST00000490909 ZC3H13Q5T200 1668 aaKnown RBP13.66□□□□□ -0.22
PCOLCE-209ENST00000490909 GGT6Q6P531 493 aa13.65□□□□□ -0.22
PCOLCE-209ENST00000490909 DHX29Q7Z478 1369 aaKnown RBP13.65□□□□□ -0.22
PCOLCE-209ENST00000490909 EIF2AK4Q9P2K8 1649 aaKnown RBP13.64□□□□□ -0.23
PCOLCE-209ENST00000490909 CEP152O94986 1710 aa13.64□□□□□ -0.23
PCOLCE-209ENST00000490909 CROCC2H7BZ55 1655 aa13.64□□□□□ -0.23
PCOLCE-209ENST00000490909 DISP3Q9P2K9 1392 aa13.64□□□□□ -0.23
PCOLCE-209ENST00000490909 SOCS7O14512 581 aa13.64□□□□□ -0.23
PCOLCE-209ENST00000490909 VWDEQ8N2E2 1590 aa13.63□□□□□ -0.23
PCOLCE-209ENST00000490909 ABCC3O15438 1527 aa13.63□□□□□ -0.23
PCOLCE-209ENST00000490909 LRRC9Q6ZRR7 1453 aa13.62□□□□□ -0.23
PCOLCE-209ENST00000490909 ALKQ9UM73 1620 aa13.62□□□□□ -0.23
PCOLCE-209ENST00000490909 VPS8Q8N3P4 1428 aa13.62□□□□□ -0.23
PCOLCE-209ENST00000490909 DEPDC5O75140 1603 aa13.61□□□□□ -0.23
PCOLCE-209ENST00000490909 STRCP1A6NGW2 1772 aa13.61□□□□□ -0.23
PCOLCE-209ENST00000490909 TNRQ92752 1358 aa13.6□□□□□ -0.23
PCOLCE-209ENST00000490909 IQGAP1P46940 1657 aa13.59□□□□□ -0.23
PCOLCE-209ENST00000490909 PKD2Q13563 968 aa13.59□□□□□ -0.23
PCOLCE-209ENST00000490909 FBXO31Q5XUX0 539 aaPredicted RBP13.58□□□□□ -0.24
PCOLCE-209ENST00000490909 PPP6R1Q9UPN7 881 aa13.58□□□□□ -0.24
PCOLCE-209ENST00000490909 NLRP1Q9C000 1473 aa13.58□□□□□ -0.24
PCOLCE-209ENST00000490909 UBR1Q8IWV7 1749 aa13.58□□□□□ -0.24
PCOLCE-209ENST00000490909 UGGT1Q9NYU2 1555 aa13.58□□□□□ -0.24
PCOLCE-209ENST00000490909 CPS1P31327 1500 aa13.57□□□□□ -0.24
PCOLCE-209ENST00000490909 PRDM15P57071 1507 aaPredicted RBP13.57□□□□□ -0.24
PCOLCE-209ENST00000490909 ERVK-7P63135 1459 aa13.56□□□□□ -0.24
PCOLCE-209ENST00000490909 MAP3K1Q13233 1512 aa13.56□□□□□ -0.24
PCOLCE-209ENST00000490909 KIF3BO15066 747 aa13.56□□□□□ -0.24
PCOLCE-209ENST00000490909 MED14O60244 1454 aa13.55□□□□□ -0.24
PCOLCE-209ENST00000490909 SYNMO15061 1565 aa13.55□□□□□ -0.24
PCOLCE-209ENST00000490909 SHANK2Q9UPX8 1470 aa13.55□□□□□ -0.24
PCOLCE-209ENST00000490909 CFAP65Q6ZU64 1925 aaKnown RBP13.54□□□□□ -0.24
PCOLCE-209ENST00000490909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.54□□□□□ -0.24
PCOLCE-209ENST00000490909 MYOM3Q5VTT5 1437 aa13.54□□□□□ -0.24
PCOLCE-209ENST00000490909 MIA2Q96PC5 1412 aa13.54□□□□□ -0.24
PCOLCE-209ENST00000490909 MED1Q15648 1581 aaPredicted RBP13.54□□□□□ -0.24
PCOLCE-209ENST00000490909 UBAP1LF5GYI3 381 aa13.52□□□□□ -0.25
PCOLCE-209ENST00000490909 XIRP1Q702N8 1843 aaKnown RBP13.52□□□□□ -0.25
PCOLCE-209ENST00000490909 PTPN23Q9H3S7 1636 aa13.51□□□□□ -0.25
PCOLCE-209ENST00000490909 DUOX2Q9NRD8 1548 aa13.51□□□□□ -0.25
PCOLCE-209ENST00000490909 NPHP4O75161 1426 aaPredicted RBP13.51□□□□□ -0.25
PCOLCE-209ENST00000490909 WASHC2CQ9Y4E1 1318 aa13.5□□□□□ -0.25
PCOLCE-209ENST00000490909 KANK4Q5T7N3 995 aaPredicted RBP13.5□□□□□ -0.25
PCOLCE-209ENST00000490909 PIK3C2BO00750 1634 aa13.49□□□□□ -0.25
PCOLCE-209ENST00000490909 RSPH4AQ5TD94 716 aa13.48□□□□□ -0.25
PCOLCE-209ENST00000490909 SLIT1O75093 1534 aa13.47□□□□□ -0.25
PCOLCE-209ENST00000490909 LRRC7Q96NW7 1537 aa13.47□□□□□ -0.25
PCOLCE-209ENST00000490909 ARHGAP23Q9P227 1491 aa13.47□□□□□ -0.25
PCOLCE-209ENST00000490909 ABCC5O15440 1437 aa13.46□□□□□ -0.26
PCOLCE-209ENST00000490909 ERBINQ96RT1 1412 aa13.46□□□□□ -0.26
PCOLCE-209ENST00000490909 KIF15Q9NS87 1388 aa13.45□□□□□ -0.26
PCOLCE-209ENST00000490909 KDM5AP29375 1690 aaKnown RBP13.44□□□□□ -0.26
PCOLCE-209ENST00000490909 SCAF11Q99590 1463 aaKnown RBP13.44□□□□□ -0.26
PCOLCE-209ENST00000490909 LOC105371045A0A1W2PR82 267 aa13.44□□□□□ -0.26
PCOLCE-209ENST00000490909 DAPK1P53355 1430 aa13.44□□□□□ -0.26
PCOLCE-209ENST00000490909 ARHGAP31Q2M1Z3 1444 aa13.44□□□□□ -0.26
PCOLCE-209ENST00000490909 TSPY4P0CV99 314 aa13.43□□□□□ -0.26
PCOLCE-209ENST00000490909 TSPY10P0CW01 314 aa13.43□□□□□ -0.26
PCOLCE-209ENST00000490909 HSPA1LP34931 641 aa13.43□□□□□ -0.26
PCOLCE-209ENST00000490909 FGD6Q6ZV73 1430 aa13.42□□□□□ -0.26
PCOLCE-209ENST00000490909 EFCAB6Q5THR3 1501 aa13.42□□□□□ -0.26
PCOLCE-209ENST00000490909 LMTK2Q8IWU2 1503 aa13.42□□□□□ -0.26
PCOLCE-209ENST00000490909 ANKLE2Q86XL3 938 aa13.41□□□□□ -0.26
PCOLCE-209ENST00000490909 THEMISQ8N1K5 641 aaPredicted RBP13.41□□□□□ -0.26
PCOLCE-209ENST00000490909 PIP4K2BP78356 416 aa13.4□□□□□ -0.26
PCOLCE-209ENST00000490909 MYO5BQ9ULV0 1848 aa13.4□□□□□ -0.26
PCOLCE-209ENST00000490909 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
PCOLCE-209ENST00000490909 ADGRB3O60242 1522 aa13.39□□□□□ -0.27
PCOLCE-209ENST00000490909 NWD1Q149M9 1564 aa13.37□□□□□ -0.27
PCOLCE-209ENST00000490909 ADGRL2O95490 1459 aa13.36□□□□□ -0.27
PCOLCE-209ENST00000490909 GCC2Q8IWJ2 1684 aa13.36□□□□□ -0.27
PCOLCE-209ENST00000490909 TET3O43151 1660 aa13.35□□□□□ -0.27
PCOLCE-209ENST00000490909 TOM1O60784 492 aa13.35□□□□□ -0.27
PCOLCE-209ENST00000490909 LTKP29376 864 aa13.35□□□□□ -0.27
PCOLCE-209ENST00000490909 NOS1P29475 1434 aa13.34□□□□□ -0.27
PCOLCE-209ENST00000490909 TMEM2Q9UHN6 1383 aa13.33□□□□□ -0.27
PCOLCE-209ENST00000490909 UNC13BO14795 1591 aa13.33□□□□□ -0.28
PCOLCE-209ENST00000490909 ROBO1Q9Y6N7 1651 aa13.32□□□□□ -0.28
PCOLCE-209ENST00000490909 RRP7BPQ9NSQ0 103 aa13.32□□□□□ -0.28
PCOLCE-209ENST00000490909 TMEM131LA2VDJ0 1609 aa13.29□□□□□ -0.28
PCOLCE-209ENST00000490909 E9PCH4 1651 aa13.29□□□□□ -0.28
PCOLCE-209ENST00000490909 ANKRD30AQ9BXX3 1397 aa13.29□□□□□ -0.28
PCOLCE-209ENST00000490909 NKTRP30414 1462 aaKnown RBP13.29□□□□□ -0.28
PCOLCE-209ENST00000490909 KANK1Q14678 1352 aa13.28□□□□□ -0.28
PCOLCE-209ENST00000490909 ZFYVE9O95405 1425 aa13.28□□□□□ -0.28
PCOLCE-209ENST00000490909 CHD2O14647 1828 aaKnown RBP13.27□□□□□ -0.28
PCOLCE-209ENST00000490909 TXNDC2Q86VQ3 553 aa13.27□□□□□ -0.29
PCOLCE-209ENST00000490909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.27□□□□□ -0.29
PCOLCE-209ENST00000490909 SENP3Q9H4L4 574 aaPredicted RBP13.27□□□□□ -0.29
PCOLCE-209ENST00000490909 RPRD2Q5VT52 1461 aaKnown RBP13.27□□□□□ -0.29
PCOLCE-209ENST00000490909 IQGAP3Q86VI3 1631 aa13.26□□□□□ -0.29
PCOLCE-209ENST00000490909 CHIC2Q9UKJ5 165 aa13.26□□□□□ -0.29
PCOLCE-209ENST00000490909 TMEM94Q12767 1356 aa13.25□□□□□ -0.29
PCOLCE-209ENST00000490909 ANKRD50Q9ULJ7 1429 aa13.24□□□□□ -0.29
PCOLCE-209ENST00000490909 IDI1Q13907 227 aa13.24□□□□□ -0.29
PCOLCE-209ENST00000490909 SETD1AO15047 1707 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms