RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 DNMT1P26358 1616 aaKnown RBP26.43■■□□□ 1.82
SRGAP3-209ENST00000490889 A2ML1A8K2U0 1454 aa26.42■■□□□ 1.82
SRGAP3-209ENST00000490889 FBXO31Q5XUX0 539 aaPredicted RBP26.42■■□□□ 1.82
SRGAP3-209ENST00000490889 ZNF335Q9H4Z2 1342 aaPredicted RBP26.4■■□□□ 1.82
SRGAP3-209ENST00000490889 MAP3K1Q13233 1512 aa26.4■■□□□ 1.82
SRGAP3-209ENST00000490889 FAM135AQ9P2D6 1515 aa26.4■■□□□ 1.82
SRGAP3-209ENST00000490889 PZPP20742 1482 aa26.4■■□□□ 1.82
SRGAP3-209ENST00000490889 IQSEC2Q5JU85 1478 aa26.4■■□□□ 1.82
SRGAP3-209ENST00000490889 PKD2Q13563 968 aa26.39■■□□□ 1.82
SRGAP3-209ENST00000490889 MAST1Q9Y2H9 1570 aa26.38■■□□□ 1.81
SRGAP3-209ENST00000490889 TSPY4P0CV99 314 aa26.38■■□□□ 1.81
SRGAP3-209ENST00000490889 TSPY10P0CW01 314 aa26.38■■□□□ 1.81
SRGAP3-209ENST00000490889 TNRQ92752 1358 aa26.37■■□□□ 1.81
SRGAP3-209ENST00000490889 WASHC2CQ9Y4E1 1318 aa26.36■■□□□ 1.81
SRGAP3-209ENST00000490889 MYOM3Q5VTT5 1437 aa26.34■■□□□ 1.81
SRGAP3-209ENST00000490889 RNF17Q9BXT8 1623 aaKnown RBP26.34■■□□□ 1.81
SRGAP3-209ENST00000490889 MIA2Q96PC5 1412 aa26.32■■□□□ 1.8
SRGAP3-209ENST00000490889 NEURL4Q96JN8 1562 aa26.31■■□□□ 1.8
SRGAP3-209ENST00000490889 POLR1AO95602 1720 aaPredicted RBP26.31■■□□□ 1.8
SRGAP3-209ENST00000490889 ABCC3O15438 1527 aa26.29■■□□□ 1.8
SRGAP3-209ENST00000490889 MROH1Q8NDA8 1641 aa26.28■■□□□ 1.8
SRGAP3-209ENST00000490889 EIF2AK4Q9P2K8 1649 aaKnown RBP26.28■■□□□ 1.8
SRGAP3-209ENST00000490889 ZC3H13Q5T200 1668 aaKnown RBP26.25■■□□□ 1.79
SRGAP3-209ENST00000490889 NLRP1Q9C000 1473 aa26.25■■□□□ 1.79
SRGAP3-209ENST00000490889 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.24■■□□□ 1.79
SRGAP3-209ENST00000490889 UGGT1Q9NYU2 1555 aa26.23■■□□□ 1.79
SRGAP3-209ENST00000490889 SPATA31D1Q6ZQQ2 1576 aa26.22■■□□□ 1.79
SRGAP3-209ENST00000490889 CEP152O94986 1710 aa26.21■■□□□ 1.79
SRGAP3-209ENST00000490889 DISP3Q9P2K9 1392 aa26.2■■□□□ 1.79
SRGAP3-209ENST00000490889 DUOX2Q9NRD8 1548 aa26.2■■□□□ 1.79
SRGAP3-209ENST00000490889 CROCC2H7BZ55 1655 aa26.2■■□□□ 1.78
SRGAP3-209ENST00000490889 PTPN23Q9H3S7 1636 aa26.19■■□□□ 1.78
SRGAP3-209ENST00000490889 UBAP1LF5GYI3 381 aa26.19■■□□□ 1.78
SRGAP3-209ENST00000490889 ABCC5O15440 1437 aa26.19■■□□□ 1.78
SRGAP3-209ENST00000490889 ERVK-7P63135 1459 aa26.18■■□□□ 1.78
SRGAP3-209ENST00000490889 THEMISQ8N1K5 641 aaPredicted RBP26.17■■□□□ 1.78
SRGAP3-209ENST00000490889 SHANK2Q9UPX8 1470 aa26.17■■□□□ 1.78
SRGAP3-209ENST00000490889 ANKLE2Q86XL3 938 aa26.16■■□□□ 1.78
SRGAP3-209ENST00000490889 DEPDC5O75140 1603 aa26.15■■□□□ 1.78
SRGAP3-209ENST00000490889 ILDR2Q71H61 639 aa26.15■■□□□ 1.78
SRGAP3-209ENST00000490889 KIF15Q9NS87 1388 aa26.15■■□□□ 1.78
SRGAP3-209ENST00000490889 VWDEQ8N2E2 1590 aa26.15■■□□□ 1.78
SRGAP3-209ENST00000490889 MED14O60244 1454 aa26.14■■□□□ 1.78
SRGAP3-209ENST00000490889 CPS1P31327 1500 aa26.13■■□□□ 1.77
SRGAP3-209ENST00000490889 PRDM15P57071 1507 aaPredicted RBP26.13■■□□□ 1.77
SRGAP3-209ENST00000490889 NPHP4O75161 1426 aaPredicted RBP26.13■■□□□ 1.77
SRGAP3-209ENST00000490889 DAPK1P53355 1430 aa26.12■■□□□ 1.77
SRGAP3-209ENST00000490889 FGD6Q6ZV73 1430 aa26.11■■□□□ 1.77
SRGAP3-209ENST00000490889 CFAP65Q6ZU64 1925 aaKnown RBP26.1■■□□□ 1.77
SRGAP3-209ENST00000490889 APLP2Q06481 763 aa26.1■■□□□ 1.77
SRGAP3-209ENST00000490889 RRP7BPQ9NSQ0 103 aa26.1■■□□□ 1.77
SRGAP3-209ENST00000490889 ERBINQ96RT1 1412 aa26.1■■□□□ 1.77
SRGAP3-209ENST00000490889 IQGAP1P46940 1657 aa26.09■■□□□ 1.77
SRGAP3-209ENST00000490889 UBR1Q8IWV7 1749 aa26.08■■□□□ 1.76
SRGAP3-209ENST00000490889 ARHGAP31Q2M1Z3 1444 aa26.05■■□□□ 1.76
SRGAP3-209ENST00000490889 STRCP1A6NGW2 1772 aa26.03■■□□□ 1.76
SRGAP3-209ENST00000490889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.01■■□□□ 1.75
SRGAP3-209ENST00000490889 ALKQ9UM73 1620 aa26■■□□□ 1.75
SRGAP3-209ENST00000490889 CHIC2Q9UKJ5 165 aa26■■□□□ 1.75
SRGAP3-209ENST00000490889 ARHGAP23Q9P227 1491 aa25.98■■□□□ 1.75
SRGAP3-209ENST00000490889 PIP4K2BP78356 416 aa25.98■■□□□ 1.75
SRGAP3-209ENST00000490889 SCAF1Q9H7N4 1312 aaKnown RBP25.97■■□□□ 1.75
SRGAP3-209ENST00000490889 SLIT1O75093 1534 aa25.97■■□□□ 1.75
SRGAP3-209ENST00000490889 SCAF11Q99590 1463 aaKnown RBP25.97■■□□□ 1.75
SRGAP3-209ENST00000490889 ANKRD30AQ9BXX3 1397 aa25.96■■□□□ 1.75
SRGAP3-209ENST00000490889 PIK3C2BO00750 1634 aa25.96■■□□□ 1.75
SRGAP3-209ENST00000490889 TOM1O60784 492 aa25.96■■□□□ 1.75
SRGAP3-209ENST00000490889 LMTK2Q8IWU2 1503 aa25.95■■□□□ 1.74
SRGAP3-209ENST00000490889 LTKP29376 864 aa25.95■■□□□ 1.74
SRGAP3-209ENST00000490889 HSPA1LP34931 641 aa25.95■■□□□ 1.74
SRGAP3-209ENST00000490889 LRRC7Q96NW7 1537 aa25.94■■□□□ 1.74
SRGAP3-209ENST00000490889 KANK1Q14678 1352 aa25.94■■□□□ 1.74
SRGAP3-209ENST00000490889 ADGRL2O95490 1459 aa25.92■■□□□ 1.74
SRGAP3-209ENST00000490889 SYNMO15061 1565 aa25.92■■□□□ 1.74
SRGAP3-209ENST00000490889 SOCS7O14512 581 aa25.91■■□□□ 1.74
SRGAP3-209ENST00000490889 TXNDC2Q86VQ3 553 aa25.9■■□□□ 1.74
SRGAP3-209ENST00000490889 EFCAB6Q5THR3 1501 aa25.88■■□□□ 1.73
SRGAP3-209ENST00000490889 TMEM2Q9UHN6 1383 aa25.86■■□□□ 1.73
SRGAP3-209ENST00000490889 FAM50AQ14320 339 aaKnown RBP25.86■■□□□ 1.73
SRGAP3-209ENST00000490889 KDM5AP29375 1690 aaKnown RBP25.85■■□□□ 1.73
SRGAP3-209ENST00000490889 IDI1Q13907 227 aa25.85■■□□□ 1.73
SRGAP3-209ENST00000490889 NOS1P29475 1434 aa25.85■■□□□ 1.73
SRGAP3-209ENST00000490889 MED1Q15648 1581 aaPredicted RBP25.83■■□□□ 1.73
SRGAP3-209ENST00000490889 EID1Q9Y6B2 187 aa25.82■■□□□ 1.72
SRGAP3-209ENST00000490889 XIRP1Q702N8 1843 aaKnown RBP25.81■■□□□ 1.72
SRGAP3-209ENST00000490889 ANKRD50Q9ULJ7 1429 aa25.8■■□□□ 1.72
SRGAP3-209ENST00000490889 STAG3Q9UJ98 1225 aa25.8■■□□□ 1.72
SRGAP3-209ENST00000490889 ADGRB3O60242 1522 aa25.78■■□□□ 1.72
SRGAP3-209ENST00000490889 TET3O43151 1660 aa25.76■■□□□ 1.71
SRGAP3-209ENST00000490889 SENP3Q9H4L4 574 aaPredicted RBP25.74■■□□□ 1.71
SRGAP3-209ENST00000490889 RPRD2Q5VT52 1461 aaKnown RBP25.73■■□□□ 1.71
SRGAP3-209ENST00000490889 UNC13BO14795 1591 aa25.72■■□□□ 1.71
SRGAP3-209ENST00000490889 SLC26A8Q96RN1 970 aa25.71■■□□□ 1.71
SRGAP3-209ENST00000490889 SLC52A1Q9NWF4 448 aa25.71■■□□□ 1.71
SRGAP3-209ENST00000490889 MYO5BQ9ULV0 1848 aa25.69■■□□□ 1.7
SRGAP3-209ENST00000490889 GCC2Q8IWJ2 1684 aa25.68■■□□□ 1.7
SRGAP3-209ENST00000490889 TMEM94Q12767 1356 aa25.67■■□□□ 1.7
SRGAP3-209ENST00000490889 ZFYVE9O95405 1425 aa25.66■■□□□ 1.7
SRGAP3-209ENST00000490889 KCNA6P17658 529 aa25.66■■□□□ 1.7
SRGAP3-209ENST00000490889 TMEM131LA2VDJ0 1609 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms