RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 THEMISQ8N1K5 641 aaPredicted RBP18.67■□□□□ 0.58
ARHGEF39-205ENST00000490638 SUPT16HQ9Y5B9 1047 aaKnown RBP18.66■□□□□ 0.58
ARHGEF39-205ENST00000490638 PANK3Q9H999 370 aa18.65■□□□□ 0.58
ARHGEF39-205ENST00000490638 ATF3P18847 181 aa18.64■□□□□ 0.57
ARHGEF39-205ENST00000490638 HECW1Q76N89 1606 aa18.64■□□□□ 0.57
ARHGEF39-205ENST00000490638 CUL7Q14999 1698 aa18.64■□□□□ 0.57
ARHGEF39-205ENST00000490638 PSME1Q06323 249 aa18.63■□□□□ 0.57
ARHGEF39-205ENST00000490638 EHBP1L1Q8N3D4 1523 aa18.63■□□□□ 0.57
ARHGEF39-205ENST00000490638 SLC52A1Q9NWF4 448 aa18.63■□□□□ 0.57
ARHGEF39-205ENST00000490638 CENPJQ9HC77 1338 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF39-205ENST00000490638 COG3Q96JB2 828 aa18.62■□□□□ 0.57
ARHGEF39-205ENST00000490638 CCER2I3L3R5 266 aa18.62■□□□□ 0.57
ARHGEF39-205ENST00000490638 CFAP70Q5T0N1 1121 aa18.62■□□□□ 0.57
ARHGEF39-205ENST00000490638 ARHGEF11O15085 1522 aa18.62■□□□□ 0.57
ARHGEF39-205ENST00000490638 USP47Q96K76 1375 aa18.62■□□□□ 0.57
ARHGEF39-205ENST00000490638 POGZQ7Z3K3 1410 aa18.61■□□□□ 0.57
ARHGEF39-205ENST00000490638 ZNF330Q9Y3S2 320 aaPredicted RBP18.61■□□□□ 0.57
ARHGEF39-205ENST00000490638 NLRP13Q86W25 1043 aa18.6■□□□□ 0.57
ARHGEF39-205ENST00000490638 PROSER2Q86WR7 435 aaPredicted RBP18.59■□□□□ 0.57
ARHGEF39-205ENST00000490638 MS4A1P11836 297 aa18.57■□□□□ 0.56
ARHGEF39-205ENST00000490638 CGNL1Q0VF96 1302 aa18.57■□□□□ 0.56
ARHGEF39-205ENST00000490638 EVA1CP58658 441 aa18.57■□□□□ 0.56
ARHGEF39-205ENST00000490638 SLC26A8Q96RN1 970 aa18.57■□□□□ 0.56
ARHGEF39-205ENST00000490638 CALD1Q05682 793 aaKnown RBP18.56■□□□□ 0.56
ARHGEF39-205ENST00000490638 ANKLE2Q86XL3 938 aa18.55■□□□□ 0.56
ARHGEF39-205ENST00000490638 CHMP4BQ9H444 224 aaKnown RBP18.55■□□□□ 0.56
ARHGEF39-205ENST00000490638 TIAM1Q13009 1591 aa18.54■□□□□ 0.56
ARHGEF39-205ENST00000490638 RRBP1Q9P2E9 1410 aaKnown RBP18.54■□□□□ 0.56
ARHGEF39-205ENST00000490638 OS9Q13438 667 aaPredicted RBP18.54■□□□□ 0.56
ARHGEF39-205ENST00000490638 ADGRL1O94910 1474 aa18.51■□□□□ 0.55
ARHGEF39-205ENST00000490638 CCDC146Q8IYE0 955 aa18.51■□□□□ 0.55
ARHGEF39-205ENST00000490638 HFM1A2PYH4 1435 aa18.5■□□□□ 0.55
ARHGEF39-205ENST00000490638 DAPK1P53355 1430 aa18.5■□□□□ 0.55
ARHGEF39-205ENST00000490638 BIVM-ERCC5R4GMW8 1640 aa18.5■□□□□ 0.55
ARHGEF39-205ENST00000490638 CABP2Q9NPB3 220 aa18.49■□□□□ 0.55
ARHGEF39-205ENST00000490638 CHMP4AQ9BY43 222 aa18.48■□□□□ 0.55
ARHGEF39-205ENST00000490638 CEBPAP49715 358 aaPredicted RBP18.47■□□□□ 0.55
ARHGEF39-205ENST00000490638 PRAM1Q96QH2 718 aa18.46■□□□□ 0.55
ARHGEF39-205ENST00000490638 CCDC141Q6ZP82 1450 aa18.46■□□□□ 0.55
ARHGEF39-205ENST00000490638 NBPF1Q3BBV0 1214 aa18.46■□□□□ 0.55
ARHGEF39-205ENST00000490638 STK31Q9BXU1 1019 aa18.46■□□□□ 0.55
ARHGEF39-205ENST00000490638 NLRP6P59044 892 aa18.45■□□□□ 0.54
ARHGEF39-205ENST00000490638 NUTM2GQ5VZR2 741 aa18.45■□□□□ 0.54
ARHGEF39-205ENST00000490638 ESCO1Q5FWF5 840 aa18.45■□□□□ 0.54
ARHGEF39-205ENST00000490638 IPO8O15397 1037 aaKnown RBP18.45■□□□□ 0.54
ARHGEF39-205ENST00000490638 LMOD3Q0VAK6 560 aa18.44■□□□□ 0.54
ARHGEF39-205ENST00000490638 KIAA1107Q9UPP5 1409 aa18.44■□□□□ 0.54
ARHGEF39-205ENST00000490638 SUPT6HQ7KZ85 1726 aaKnown RBP18.44■□□□□ 0.54
ARHGEF39-205ENST00000490638 GOLGA2Q08379 1002 aa18.43■□□□□ 0.54
ARHGEF39-205ENST00000490638 DENND4BO75064 1496 aaPredicted RBP18.43■□□□□ 0.54
ARHGEF39-205ENST00000490638 PCF11O94913 1555 aaKnown RBP18.43■□□□□ 0.54
ARHGEF39-205ENST00000490638 MEX3CQ5U5Q3 659 aaKnown RBP18.43■□□□□ 0.54
ARHGEF39-205ENST00000490638 GGNBP2Q9H3C7 697 aa18.43■□□□□ 0.54
ARHGEF39-205ENST00000490638 RRP7AQ9Y3A4 280 aaKnown RBP18.43■□□□□ 0.54
ARHGEF39-205ENST00000490638 RGS3P49796 1198 aa18.42■□□□□ 0.54
ARHGEF39-205ENST00000490638 PMFBP1Q8TBY8 1022 aa18.42■□□□□ 0.54
ARHGEF39-205ENST00000490638 FANCAO15360 1455 aa18.42■□□□□ 0.54
ARHGEF39-205ENST00000490638 MYBBP1AQ9BQG0 1328 aaKnown RBP18.41■□□□□ 0.54
ARHGEF39-205ENST00000490638 FBXO31Q5XUX0 539 aaPredicted RBP18.4■□□□□ 0.54
ARHGEF39-205ENST00000490638 C1orf141Q5JVX7 400 aa18.4■□□□□ 0.54
ARHGEF39-205ENST00000490638 PRKRIP1Q9H875 184 aaPredicted RBP18.4■□□□□ 0.54
ARHGEF39-205ENST00000490638 ASXL2Q76L83 1435 aa18.4■□□□□ 0.54
ARHGEF39-205ENST00000490638 TEFQ10587 303 aa18.4■□□□□ 0.54
ARHGEF39-205ENST00000490638 DIAPH1O60610 1272 aaKnown RBP18.38■□□□□ 0.53
ARHGEF39-205ENST00000490638 ATP10BO94823 1461 aa18.38■□□□□ 0.53
ARHGEF39-205ENST00000490638 GPRASP1Q5JY77 1395 aa18.37■□□□□ 0.53
ARHGEF39-205ENST00000490638 ABTB2Q8N961 1025 aa18.37■□□□□ 0.53
ARHGEF39-205ENST00000490638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.37■□□□□ 0.53
ARHGEF39-205ENST00000490638 RPGRIP1LQ68CZ1 1315 aa18.36■□□□□ 0.53
ARHGEF39-205ENST00000490638 KIF14Q15058 1648 aa18.36■□□□□ 0.53
ARHGEF39-205ENST00000490638 NLRP2Q9NX02 1062 aa18.36■□□□□ 0.53
ARHGEF39-205ENST00000490638 AKNAQ7Z591 1439 aa18.36■□□□□ 0.53
ARHGEF39-205ENST00000490638 CAMSAP2Q08AD1 1489 aa18.36■□□□□ 0.53
ARHGEF39-205ENST00000490638 ELL2O00472 640 aaPredicted RBP18.36■□□□□ 0.53
ARHGEF39-205ENST00000490638 IDI1Q13907 227 aa18.36■□□□□ 0.53
ARHGEF39-205ENST00000490638 ROCK1Q13464 1354 aa18.36■□□□□ 0.53
ARHGEF39-205ENST00000490638 SMC4Q9NTJ3 1288 aa18.35■□□□□ 0.53
ARHGEF39-205ENST00000490638 NAIPQ13075 1403 aa18.35■□□□□ 0.53
ARHGEF39-205ENST00000490638 CASC1Q6TDU7 716 aa18.35■□□□□ 0.53
ARHGEF39-205ENST00000490638 RCAN3Q9UKA8 241 aa18.35■□□□□ 0.53
ARHGEF39-205ENST00000490638 KIF21AQ7Z4S6 1674 aa18.35■□□□□ 0.53
ARHGEF39-205ENST00000490638 ABCC5O15440 1437 aa18.35■□□□□ 0.53
ARHGEF39-205ENST00000490638 KIF7Q2M1P5 1343 aa18.34■□□□□ 0.53
ARHGEF39-205ENST00000490638 ANKRD30BQ9BXX2 1392 aa18.34■□□□□ 0.53
ARHGEF39-205ENST00000490638 SYTL4Q96C24 671 aaPredicted RBP18.34■□□□□ 0.53
ARHGEF39-205ENST00000490638 APBB1O00213 710 aa18.34■□□□□ 0.53
ARHGEF39-205ENST00000490638 PPP4R2Q9NY27 417 aa18.34■□□□□ 0.53
ARHGEF39-205ENST00000490638 RAPGEF4Q8WZA2 1011 aa18.34■□□□□ 0.53
ARHGEF39-205ENST00000490638 ERBINQ96RT1 1412 aa18.34■□□□□ 0.53
ARHGEF39-205ENST00000490638 GTF2E1P29083 439 aaPredicted RBP18.33■□□□□ 0.53
ARHGEF39-205ENST00000490638 NBPF8Q3BBV2 869 aa18.33■□□□□ 0.53
ARHGEF39-205ENST00000490638 SLC4A10Q6U841 1118 aa18.33■□□□□ 0.52
ARHGEF39-205ENST00000490638 SLC12A5Q9H2X9 1139 aa18.33■□□□□ 0.52
ARHGEF39-205ENST00000490638 USP35Q9P2H5 1018 aa18.32■□□□□ 0.52
ARHGEF39-205ENST00000490638 B4GALNT3Q6L9W6 998 aa18.31■□□□□ 0.52
ARHGEF39-205ENST00000490638 CLUAP1Q96AJ1 413 aa18.31■□□□□ 0.52
ARHGEF39-205ENST00000490638 APAF1O14727 1248 aa18.31■□□□□ 0.52
ARHGEF39-205ENST00000490638 ITPRIPQ8IWB1 547 aa18.31■□□□□ 0.52
ARHGEF39-205ENST00000490638 CDK19Q9BWU1 502 aa18.31■□□□□ 0.52
ARHGEF39-205ENST00000490638 WDR62O43379 1518 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms