RNA–Protein interactions for RNA: ENST00000490554.5

LMNB2-203, Transcript of lamin B2, humanhuman

TSL 2

Gene LMNB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-203ENST00000490554 CCDC141Q6ZP82 1450 aa24.88■■□□□ 1.57
LMNB2-203ENST00000490554 DNMT1P26358 1616 aaKnown RBP24.87■■□□□ 1.57
LMNB2-203ENST00000490554 RSPH4AQ5TD94 716 aa24.87■■□□□ 1.57
LMNB2-203ENST00000490554 NCOA2Q15596 1464 aa24.86■■□□□ 1.57
LMNB2-203ENST00000490554 TNRQ92752 1358 aa24.86■■□□□ 1.57
LMNB2-203ENST00000490554 CAMSAP2Q08AD1 1489 aa24.85■■□□□ 1.57
LMNB2-203ENST00000490554 PZPP20742 1482 aa24.83■■□□□ 1.57
LMNB2-203ENST00000490554 KDM5DQ9BY66 1539 aa24.83■■□□□ 1.57
LMNB2-203ENST00000490554 FAM135AQ9P2D6 1515 aa24.83■■□□□ 1.57
LMNB2-203ENST00000490554 WASHC2CQ9Y4E1 1318 aa24.82■■□□□ 1.56
LMNB2-203ENST00000490554 NEURL4Q96JN8 1562 aa24.77■■□□□ 1.56
LMNB2-203ENST00000490554 MIA2Q96PC5 1412 aa24.77■■□□□ 1.56
LMNB2-203ENST00000490554 TSPY4P0CV99 314 aa24.76■■□□□ 1.55
LMNB2-203ENST00000490554 TSPY10P0CW01 314 aa24.76■■□□□ 1.55
LMNB2-203ENST00000490554 ARHGEF5Q12774 1597 aa24.76■■□□□ 1.55
LMNB2-203ENST00000490554 ANKLE2Q86XL3 938 aa24.75■■□□□ 1.55
LMNB2-203ENST00000490554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.75■■□□□ 1.55
LMNB2-203ENST00000490554 THEMISQ8N1K5 641 aaPredicted RBP24.74■■□□□ 1.55
LMNB2-203ENST00000490554 CPS1P31327 1500 aa24.73■■□□□ 1.55
LMNB2-203ENST00000490554 NLRP1Q9C000 1473 aa24.73■■□□□ 1.55
LMNB2-203ENST00000490554 SHANK2Q9UPX8 1470 aa24.73■■□□□ 1.55
LMNB2-203ENST00000490554 POLR1AO95602 1720 aaPredicted RBP24.72■■□□□ 1.55
LMNB2-203ENST00000490554 UGGT1Q9NYU2 1555 aa24.69■■□□□ 1.54
LMNB2-203ENST00000490554 TOM1O60784 492 aa24.69■■□□□ 1.54
LMNB2-203ENST00000490554 MED14O60244 1454 aa24.68■■□□□ 1.54
LMNB2-203ENST00000490554 LRRC9Q6ZRR7 1453 aa24.68■■□□□ 1.54
LMNB2-203ENST00000490554 HSPA1LP34931 641 aa24.67■■□□□ 1.54
LMNB2-203ENST00000490554 PIP4K2BP78356 416 aa24.67■■□□□ 1.54
LMNB2-203ENST00000490554 NPHP4O75161 1426 aaPredicted RBP24.67■■□□□ 1.54
LMNB2-203ENST00000490554 SCAF1Q9H7N4 1312 aaKnown RBP24.66■■□□□ 1.54
LMNB2-203ENST00000490554 VWDEQ8N2E2 1590 aa24.66■■□□□ 1.54
LMNB2-203ENST00000490554 VPS8Q8N3P4 1428 aa24.65■■□□□ 1.54
LMNB2-203ENST00000490554 RNF17Q9BXT8 1623 aaKnown RBP24.64■■□□□ 1.54
LMNB2-203ENST00000490554 MAST1Q9Y2H9 1570 aa24.64■■□□□ 1.54
LMNB2-203ENST00000490554 ABCC3O15438 1527 aa24.64■■□□□ 1.53
LMNB2-203ENST00000490554 DEPDC5O75140 1603 aa24.64■■□□□ 1.53
LMNB2-203ENST00000490554 KANK4Q5T7N3 995 aaPredicted RBP24.6■■□□□ 1.53
LMNB2-203ENST00000490554 ERVK-7P63135 1459 aa24.59■■□□□ 1.53
LMNB2-203ENST00000490554 ZC3H13Q5T200 1668 aaKnown RBP24.59■■□□□ 1.53
LMNB2-203ENST00000490554 EIF2AK4Q9P2K8 1649 aaKnown RBP24.57■■□□□ 1.52
LMNB2-203ENST00000490554 MROH1Q8NDA8 1641 aa24.57■■□□□ 1.52
LMNB2-203ENST00000490554 MAP3K1Q13233 1512 aa24.56■■□□□ 1.52
LMNB2-203ENST00000490554 MYOM3Q5VTT5 1437 aa24.56■■□□□ 1.52
LMNB2-203ENST00000490554 IQGAP1P46940 1657 aa24.56■■□□□ 1.52
LMNB2-203ENST00000490554 ALKQ9UM73 1620 aa24.55■■□□□ 1.52
LMNB2-203ENST00000490554 LOC105371045A0A1W2PR82 267 aa24.55■■□□□ 1.52
LMNB2-203ENST00000490554 MED1Q15648 1581 aaPredicted RBP24.54■■□□□ 1.52
LMNB2-203ENST00000490554 LRRC7Q96NW7 1537 aa24.51■■□□□ 1.51
LMNB2-203ENST00000490554 DUOX2Q9NRD8 1548 aa24.51■■□□□ 1.51
LMNB2-203ENST00000490554 STRCP1A6NGW2 1772 aa24.48■■□□□ 1.51
LMNB2-203ENST00000490554 CEP152O94986 1710 aa24.47■■□□□ 1.51
LMNB2-203ENST00000490554 ARHGAP31Q2M1Z3 1444 aa24.47■■□□□ 1.51
LMNB2-203ENST00000490554 SCAF11Q99590 1463 aaKnown RBP24.46■■□□□ 1.51
LMNB2-203ENST00000490554 KIF15Q9NS87 1388 aa24.46■■□□□ 1.51
LMNB2-203ENST00000490554 UBR1Q8IWV7 1749 aa24.46■■□□□ 1.51
LMNB2-203ENST00000490554 LTKP29376 864 aa24.45■■□□□ 1.5
LMNB2-203ENST00000490554 ARHGAP23Q9P227 1491 aa24.45■■□□□ 1.5
LMNB2-203ENST00000490554 ABCC5O15440 1437 aa24.44■■□□□ 1.5
LMNB2-203ENST00000490554 TXNDC2Q86VQ3 553 aa24.44■■□□□ 1.5
LMNB2-203ENST00000490554 SYNMO15061 1565 aa24.44■■□□□ 1.5
LMNB2-203ENST00000490554 PRDM15P57071 1507 aaPredicted RBP24.44■■□□□ 1.5
LMNB2-203ENST00000490554 ERBINQ96RT1 1412 aa24.44■■□□□ 1.5
LMNB2-203ENST00000490554 RRP7BPQ9NSQ0 103 aa24.43■■□□□ 1.5
LMNB2-203ENST00000490554 SLIT1O75093 1534 aa24.43■■□□□ 1.5
LMNB2-203ENST00000490554 CFAP65Q6ZU64 1925 aaKnown RBP24.41■■□□□ 1.5
LMNB2-203ENST00000490554 PHF23Q9BUL5 403 aaPredicted RBP24.39■■□□□ 1.49
LMNB2-203ENST00000490554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.38■■□□□ 1.494e-11■□□□□ 11.2
LMNB2-203ENST00000490554 EID1Q9Y6B2 187 aa24.38■■□□□ 1.49
LMNB2-203ENST00000490554 SENP3Q9H4L4 574 aaPredicted RBP24.37■■□□□ 1.49
LMNB2-203ENST00000490554 CROCC2H7BZ55 1655 aa24.36■■□□□ 1.49
LMNB2-203ENST00000490554 DAPK1P53355 1430 aa24.35■■□□□ 1.49
LMNB2-203ENST00000490554 PTPN23Q9H3S7 1636 aa24.35■■□□□ 1.49
LMNB2-203ENST00000490554 TMEM2Q9UHN6 1383 aa24.35■■□□□ 1.49
LMNB2-203ENST00000490554 KANK1Q14678 1352 aa24.34■■□□□ 1.49
LMNB2-203ENST00000490554 APLP2Q06481 763 aa24.32■■□□□ 1.48
LMNB2-203ENST00000490554 PIK3C2BO00750 1634 aa24.32■■□□□ 1.48
LMNB2-203ENST00000490554 IDI1Q13907 227 aa24.31■■□□□ 1.48
LMNB2-203ENST00000490554 FGD6Q6ZV73 1430 aa24.31■■□□□ 1.48
LMNB2-203ENST00000490554 STAG3Q9UJ98 1225 aa24.31■■□□□ 1.48
LMNB2-203ENST00000490554 LMTK2Q8IWU2 1503 aa24.3■■□□□ 1.48
LMNB2-203ENST00000490554 ANKRD30AQ9BXX3 1397 aa24.29■■□□□ 1.48
LMNB2-203ENST00000490554 CHIC2Q9UKJ5 165 aa24.28■■□□□ 1.48
LMNB2-203ENST00000490554 EFCAB6Q5THR3 1501 aa24.27■■□□□ 1.48
LMNB2-203ENST00000490554 XIRP1Q702N8 1843 aaKnown RBP24.26■■□□□ 1.47
LMNB2-203ENST00000490554 FAM135BQ49AJ0 1406 aa24.25■■□□□ 1.47
LMNB2-203ENST00000490554 KDM5AP29375 1690 aaKnown RBP24.24■■□□□ 1.47
LMNB2-203ENST00000490554 KCNA6P17658 529 aa24.24■■□□□ 1.47
LMNB2-203ENST00000490554 TMEM94Q12767 1356 aa24.24■■□□□ 1.47
LMNB2-203ENST00000490554 NOS1P29475 1434 aa24.24■■□□□ 1.47
LMNB2-203ENST00000490554 RGS17Q9UGC6 210 aaPredicted RBP24.22■■□□□ 1.47
LMNB2-203ENST00000490554 TET3O43151 1660 aa24.21■■□□□ 1.47
LMNB2-203ENST00000490554 SLC26A8Q96RN1 970 aa24.21■■□□□ 1.47
LMNB2-203ENST00000490554 SLC52A1Q9NWF4 448 aa24.19■■□□□ 1.46
LMNB2-203ENST00000490554 PROSER2Q86WR7 435 aaPredicted RBP24.18■■□□□ 1.46
LMNB2-203ENST00000490554 ADGRL2O95490 1459 aa24.18■■□□□ 1.46
LMNB2-203ENST00000490554 ADGRB3O60242 1522 aa24.17■■□□□ 1.46
LMNB2-203ENST00000490554 RBM33Q96EV2 1170 aaKnown RBP24.15■■□□□ 1.46
LMNB2-203ENST00000490554 NKTRP30414 1462 aaKnown RBP24.13■■□□□ 1.45
LMNB2-203ENST00000490554 RPRD2Q5VT52 1461 aaKnown RBP24.12■■□□□ 1.45
LMNB2-203ENST00000490554 NWD1Q149M9 1564 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms