RNA–Protein interactions for RNA: ENST00000490544.1

C9orf43-203, Transcript of chromosome 9 open reading frame 43, humanhuman

TSL 3

Gene C9orf43, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-203ENST00000490544 RNF17Q9BXT8 1623 aaKnown RBP23.66■■□□□ 1.38
C9orf43-203ENST00000490544 ADGRL2O95490 1459 aa23.64■■□□□ 1.38
C9orf43-203ENST00000490544 LMTK3Q96Q04 1460 aa23.64■■□□□ 1.38
C9orf43-203ENST00000490544 CNTLNQ9NXG0 1405 aa23.64■■□□□ 1.37
C9orf43-203ENST00000490544 PTPRKQ15262 1439 aa23.63■■□□□ 1.37
C9orf43-203ENST00000490544 NCOA1Q15788 1441 aa23.62■■□□□ 1.37
C9orf43-203ENST00000490544 ERBINQ96RT1 1412 aa23.62■■□□□ 1.37
C9orf43-203ENST00000490544 CEBPAP49715 358 aaPredicted RBP23.62■■□□□ 1.37
C9orf43-203ENST00000490544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.62■■□□□ 1.37
C9orf43-203ENST00000490544 CEP152O94986 1710 aa23.62■■□□□ 1.37
C9orf43-203ENST00000490544 KDM5DQ9BY66 1539 aa23.61■■□□□ 1.37
C9orf43-203ENST00000490544 ZC3H13Q5T200 1668 aaKnown RBP23.59■■□□□ 1.37
C9orf43-203ENST00000490544 MROH1Q8NDA8 1641 aa23.58■■□□□ 1.36
C9orf43-203ENST00000490544 PREX1Q8TCU6 1659 aa23.57■■□□□ 1.36
C9orf43-203ENST00000490544 DEPDC5O75140 1603 aa23.56■■□□□ 1.36
C9orf43-203ENST00000490544 FAM135AQ9P2D6 1515 aa23.55■■□□□ 1.36
C9orf43-203ENST00000490544 WASHC2CQ9Y4E1 1318 aa23.55■■□□□ 1.36
C9orf43-203ENST00000490544 PRDM15P57071 1507 aaPredicted RBP23.54■■□□□ 1.36
C9orf43-203ENST00000490544 ROCK1Q13464 1354 aa23.53■■□□□ 1.36
C9orf43-203ENST00000490544 ZMYM3Q14202 1370 aa23.53■■□□□ 1.36
C9orf43-203ENST00000490544 HSPA2P54652 639 aa23.53■■□□□ 1.36
C9orf43-203ENST00000490544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.53■■□□□ 1.36
C9orf43-203ENST00000490544 PPP6R1Q9UPN7 881 aa23.53■■□□□ 1.36
C9orf43-203ENST00000490544 CAMSAP1Q5T5Y3 1602 aa23.52■■□□□ 1.36
C9orf43-203ENST00000490544 ANKRD50Q9ULJ7 1429 aa23.52■■□□□ 1.36
C9orf43-203ENST00000490544 ABCC3O15438 1527 aa23.52■■□□□ 1.36
C9orf43-203ENST00000490544 CFAP65Q6ZU64 1925 aaKnown RBP23.5■■□□□ 1.35
C9orf43-203ENST00000490544 GCC2Q8IWJ2 1684 aa23.49■■□□□ 1.35
C9orf43-203ENST00000490544 CERKQ8TCT0 537 aa23.48■■□□□ 1.35
C9orf43-203ENST00000490544 SETD1BQ9UPS6 1966 aaKnown RBP23.48■■□□□ 1.35
C9orf43-203ENST00000490544 KANK1Q14678 1352 aa23.47■■□□□ 1.35
C9orf43-203ENST00000490544 MYO3AQ8NEV4 1616 aa23.46■■□□□ 1.35
C9orf43-203ENST00000490544 UNC13BO14795 1591 aa23.44■■□□□ 1.34
C9orf43-203ENST00000490544 UHRF1BP1Q6BDS2 1440 aa23.44■■□□□ 1.34
C9orf43-203ENST00000490544 PZPP20742 1482 aa23.43■■□□□ 1.34
C9orf43-203ENST00000490544 NPATQ14207 1427 aa23.43■■□□□ 1.34
C9orf43-203ENST00000490544 DISP3Q9P2K9 1392 aa23.4■■□□□ 1.34
C9orf43-203ENST00000490544 VWDEQ8N2E2 1590 aa23.4■■□□□ 1.34
C9orf43-203ENST00000490544 FBXO31Q5XUX0 539 aaPredicted RBP23.38■■□□□ 1.33
C9orf43-203ENST00000490544 ZNF142P52746 1687 aaPredicted RBP23.38■■□□□ 1.33
C9orf43-203ENST00000490544 NAIPQ13075 1403 aa23.36■■□□□ 1.33
C9orf43-203ENST00000490544 TET3O43151 1660 aa23.36■■□□□ 1.33
C9orf43-203ENST00000490544 EFCAB6Q5THR3 1501 aa23.35■■□□□ 1.33
C9orf43-203ENST00000490544 IQGAP3Q86VI3 1631 aa23.35■■□□□ 1.33
C9orf43-203ENST00000490544 TNRQ92752 1358 aa23.35■■□□□ 1.33
C9orf43-203ENST00000490544 CEP170BQ9Y4F5 1589 aaPredicted RBP23.35■■□□□ 1.33
C9orf43-203ENST00000490544 LMTK2Q8IWU2 1503 aa23.34■■□□□ 1.33
C9orf43-203ENST00000490544 HFM1A2PYH4 1435 aa23.33■■□□□ 1.33
C9orf43-203ENST00000490544 SPATA31D1Q6ZQQ2 1576 aa23.33■■□□□ 1.33
C9orf43-203ENST00000490544 ERVK-7P63135 1459 aa23.33■■□□□ 1.33
C9orf43-203ENST00000490544 SOCS7O14512 581 aa23.32■■□□□ 1.32
C9orf43-203ENST00000490544 NUP155O75694 1391 aa23.29■■□□□ 1.32
C9orf43-203ENST00000490544 E9PCH4 1651 aa23.29■■□□□ 1.32
C9orf43-203ENST00000490544 ARHGAP31Q2M1Z3 1444 aa23.28■■□□□ 1.32
C9orf43-203ENST00000490544 ILDR2Q71H61 639 aa23.28■■□□□ 1.32
C9orf43-203ENST00000490544 A2ML1A8K2U0 1454 aa23.26■■□□□ 1.31
C9orf43-203ENST00000490544 DMRT2Q9Y5R5 561 aa23.25■■□□□ 1.31
C9orf43-203ENST00000490544 STRCQ7RTU9 1775 aa23.24■■□□□ 1.31
C9orf43-203ENST00000490544 NLRP1Q9C000 1473 aa23.24■■□□□ 1.31
C9orf43-203ENST00000490544 TRIM52Q96A61 297 aa23.24■■□□□ 1.31
C9orf43-203ENST00000490544 SYNMO15061 1565 aa23.23■■□□□ 1.31
C9orf43-203ENST00000490544 RPRD2Q5VT52 1461 aaKnown RBP23.22■■□□□ 1.31
C9orf43-203ENST00000490544 UGGT1Q9NYU2 1555 aa23.22■■□□□ 1.31
C9orf43-203ENST00000490544 PIK3C2BO00750 1634 aa23.21■■□□□ 1.31
C9orf43-203ENST00000490544 UBR1Q8IWV7 1749 aa23.2■■□□□ 1.3
C9orf43-203ENST00000490544 POLR1AO95602 1720 aaPredicted RBP23.19■■□□□ 1.3
C9orf43-203ENST00000490544 SPHKAPQ2M3C7 1700 aa23.19■■□□□ 1.3
C9orf43-203ENST00000490544 SETD5Q9C0A6 1442 aa23.16■■□□□ 1.3
C9orf43-203ENST00000490544 MYO5BQ9ULV0 1848 aa23.15■■□□□ 1.3
C9orf43-203ENST00000490544 NOS1P29475 1434 aa23.15■■□□□ 1.3
C9orf43-203ENST00000490544 PLA2R1Q13018 1463 aa23.12■■□□□ 1.29
C9orf43-203ENST00000490544 STAG3Q9UJ98 1225 aa23.12■■□□□ 1.29
C9orf43-203ENST00000490544 NCKAP5LQ9HCH0 1330 aa23.1■■□□□ 1.29
C9orf43-203ENST00000490544 KDM5AP29375 1690 aaKnown RBP23.1■■□□□ 1.29
C9orf43-203ENST00000490544 ADGRB3O60242 1522 aa23.1■■□□□ 1.29
C9orf43-203ENST00000490544 THEMISQ8N1K5 641 aaPredicted RBP23.1■■□□□ 1.29
C9orf43-203ENST00000490544 RAB3GAP2Q9H2M9 1393 aa23.1■■□□□ 1.29
C9orf43-203ENST00000490544 SLC4A1APQ9BWU0 796 aaKnown RBP23.09■■□□□ 1.29
C9orf43-203ENST00000490544 IDI1Q13907 227 aa23.07■■□□□ 1.28
C9orf43-203ENST00000490544 PKD2Q13563 968 aa23.06■■□□□ 1.28
C9orf43-203ENST00000490544 PTPRTO14522 1441 aa23.06■■□□□ 1.28
C9orf43-203ENST00000490544 CHGAP10645 457 aaKnown RBP23.04■■□□□ 1.28
C9orf43-203ENST00000490544 SLC52A1Q9NWF4 448 aa23.04■■□□□ 1.28
C9orf43-203ENST00000490544 NEURL4Q96JN8 1562 aa23.04■■□□□ 1.28
C9orf43-203ENST00000490544 TMEM131LA2VDJ0 1609 aa23.04■■□□□ 1.28
C9orf43-203ENST00000490544 CLTCL1P53675 1640 aa23.03■■□□□ 1.28
C9orf43-203ENST00000490544 KIF1BO60333 1816 aa23.03■■□□□ 1.28
C9orf43-203ENST00000490544 TRPM2O94759 1503 aa23.03■■□□□ 1.28
C9orf43-203ENST00000490544 IQGAP1P46940 1657 aa23.02■■□□□ 1.28
C9orf43-203ENST00000490544 ANKLE2Q86XL3 938 aa23.01■■□□□ 1.27
C9orf43-203ENST00000490544 SLIT1O75093 1534 aa22.99■■□□□ 1.27
C9orf43-203ENST00000490544 FOXD1Q16676 465 aa22.99■■□□□ 1.27
C9orf43-203ENST00000490544 MPHOSPH9Q99550 1183 aa22.99■■□□□ 1.27
C9orf43-203ENST00000490544 ACIN1Q9UKV3 1341 aaKnown RBP22.98■■□□□ 1.27
C9orf43-203ENST00000490544 IQSEC2Q5JU85 1478 aa22.98■■□□□ 1.27
C9orf43-203ENST00000490544 SCAF11Q99590 1463 aaKnown RBP22.98■■□□□ 1.27
C9orf43-203ENST00000490544 TMEM2Q9UHN6 1383 aa22.97■■□□□ 1.27
C9orf43-203ENST00000490544 ARHGAP23Q9P227 1491 aa22.97■■□□□ 1.27
C9orf43-203ENST00000490544 NPHP4O75161 1426 aaPredicted RBP22.96■■□□□ 1.27
C9orf43-203ENST00000490544 TXNDC2Q86VQ3 553 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms