RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 SUPT6HQ7KZ85 1726 aaKnown RBP17.13■□□□□ 0.33
UBP1-211ENST00000490112 A2MP01023 1474 aa17.13■□□□□ 0.33
UBP1-211ENST00000490112 EHBP1L1Q8N3D4 1523 aa17.13■□□□□ 0.33
UBP1-211ENST00000490112 PLXNC1O60486 1568 aa17.12■□□□□ 0.33
UBP1-211ENST00000490112 ADGBQ8N7X0 1667 aa17.1■□□□□ 0.33
UBP1-211ENST00000490112 NCOA1Q15788 1441 aa17.1■□□□□ 0.33
UBP1-211ENST00000490112 CEP162Q5TB80 1403 aa17.1■□□□□ 0.33
UBP1-211ENST00000490112 CHRDL2Q6WN34 429 aa17.09■□□□□ 0.33
UBP1-211ENST00000490112 RTEL1-TNFRSF6BF6WH68 1400 aa17.09■□□□□ 0.33
UBP1-211ENST00000490112 TIAM1Q13009 1591 aa17.09■□□□□ 0.33
UBP1-211ENST00000490112 RSPH4AQ5TD94 716 aa17.08■□□□□ 0.32
UBP1-211ENST00000490112 GGT6Q6P531 493 aa17.08■□□□□ 0.32
UBP1-211ENST00000490112 CLTCQ00610 1675 aaKnown RBP17.07■□□□□ 0.32
UBP1-211ENST00000490112 MBD5Q9P267 1494 aa17.06■□□□□ 0.32
UBP1-211ENST00000490112 CAMSAP1Q5T5Y3 1602 aa17.06■□□□□ 0.32
UBP1-211ENST00000490112 ZNF644Q9H582 1327 aaPredicted RBP17.05■□□□□ 0.32
UBP1-211ENST00000490112 IQSEC2Q5JU85 1478 aa17.05■□□□□ 0.32
UBP1-211ENST00000490112 DHX29Q7Z478 1369 aaKnown RBP17.04■□□□□ 0.32
UBP1-211ENST00000490112 PKD2Q13563 968 aa17.04■□□□□ 0.32
UBP1-211ENST00000490112 PTPRKQ15262 1439 aa17.04■□□□□ 0.32
UBP1-211ENST00000490112 ZNF142P52746 1687 aaPredicted RBP17.02■□□□□ 0.32
UBP1-211ENST00000490112 PLA2R1Q13018 1463 aa17.02■□□□□ 0.32
UBP1-211ENST00000490112 CCDC141Q6ZP82 1450 aa17.01■□□□□ 0.31
UBP1-211ENST00000490112 LTBP4Q8N2S1 1624 aa17.01■□□□□ 0.31
UBP1-211ENST00000490112 MYO3AQ8NEV4 1616 aa17.01■□□□□ 0.31
UBP1-211ENST00000490112 NCOA2Q15596 1464 aa17■□□□□ 0.31
UBP1-211ENST00000490112 CEP170BQ9Y4F5 1589 aaPredicted RBP17■□□□□ 0.31
UBP1-211ENST00000490112 FAM135AQ9P2D6 1515 aa17■□□□□ 0.31
UBP1-211ENST00000490112 NCKAP5LQ9HCH0 1330 aa16.98■□□□□ 0.31
UBP1-211ENST00000490112 TSPY4P0CV99 314 aa16.98■□□□□ 0.31
UBP1-211ENST00000490112 TSPY10P0CW01 314 aa16.98■□□□□ 0.31
UBP1-211ENST00000490112 CAMSAP2Q08AD1 1489 aa16.98■□□□□ 0.31
UBP1-211ENST00000490112 KIF3BO15066 747 aa16.97■□□□□ 0.31
UBP1-211ENST00000490112 TCOF1Q13428 1488 aaKnown RBP16.97■□□□□ 0.31
UBP1-211ENST00000490112 A2ML1A8K2U0 1454 aa16.96■□□□□ 0.31
UBP1-211ENST00000490112 ARHGEF5Q12774 1597 aa16.95■□□□□ 0.3
UBP1-211ENST00000490112 WASHC2CQ9Y4E1 1318 aa16.95■□□□□ 0.3
UBP1-211ENST00000490112 KDM5DQ9BY66 1539 aa16.94■□□□□ 0.3
UBP1-211ENST00000490112 VPS8Q8N3P4 1428 aa16.93■□□□□ 0.3
UBP1-211ENST00000490112 PZPP20742 1482 aa16.93■□□□□ 0.3
UBP1-211ENST00000490112 TNRQ92752 1358 aa16.92■□□□□ 0.3
UBP1-211ENST00000490112 LRRC9Q6ZRR7 1453 aa16.92■□□□□ 0.3
UBP1-211ENST00000490112 DNMT1P26358 1616 aaKnown RBP16.92■□□□□ 0.3
UBP1-211ENST00000490112 DISP3Q9P2K9 1392 aa16.91■□□□□ 0.3
UBP1-211ENST00000490112 ZNF335Q9H4Z2 1342 aaPredicted RBP16.91■□□□□ 0.3
UBP1-211ENST00000490112 MAP3K1Q13233 1512 aa16.9■□□□□ 0.3
UBP1-211ENST00000490112 FBXO31Q5XUX0 539 aaPredicted RBP16.88■□□□□ 0.29
UBP1-211ENST00000490112 THEMISQ8N1K5 641 aaPredicted RBP16.88■□□□□ 0.29
UBP1-211ENST00000490112 NLRP1Q9C000 1473 aa16.87■□□□□ 0.29
UBP1-211ENST00000490112 UBAP1LF5GYI3 381 aa16.87■□□□□ 0.29
UBP1-211ENST00000490112 MIA2Q96PC5 1412 aa16.87■□□□□ 0.29
UBP1-211ENST00000490112 MAST1Q9Y2H9 1570 aa16.86■□□□□ 0.29
UBP1-211ENST00000490112 ANKLE2Q86XL3 938 aa16.86■□□□□ 0.29
UBP1-211ENST00000490112 AKT1S1Q96B36 256 aa16.86■□□□□ 0.29
UBP1-211ENST00000490112 POLR1AO95602 1720 aaPredicted RBP16.85■□□□□ 0.29
UBP1-211ENST00000490112 ZBTB12Q9Y330 459 aaPredicted RBP16.85■□□□□ 0.29
UBP1-211ENST00000490112 RNF17Q9BXT8 1623 aaKnown RBP16.84■□□□□ 0.29
UBP1-211ENST00000490112 LOC105371045A0A1W2PR82 267 aa16.83■□□□□ 0.28
UBP1-211ENST00000490112 ZC3H13Q5T200 1668 aaKnown RBP16.83■□□□□ 0.28
UBP1-211ENST00000490112 MYOM3Q5VTT5 1437 aa16.83■□□□□ 0.28
UBP1-211ENST00000490112 EIF2AK4Q9P2K8 1649 aaKnown RBP16.83■□□□□ 0.28
UBP1-211ENST00000490112 UGGT1Q9NYU2 1555 aa16.82■□□□□ 0.28
UBP1-211ENST00000490112 CPS1P31327 1500 aa16.82■□□□□ 0.28
UBP1-211ENST00000490112 FOXD4L1Q9NU39 408 aa16.82■□□□□ 0.28
UBP1-211ENST00000490112 SPATA31D1Q6ZQQ2 1576 aa16.81■□□□□ 0.28
UBP1-211ENST00000490112 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.8■□□□□ 0.28
UBP1-211ENST00000490112 KANK4Q5T7N3 995 aaPredicted RBP16.8■□□□□ 0.28
UBP1-211ENST00000490112 NEURL4Q96JN8 1562 aa16.8■□□□□ 0.28
UBP1-211ENST00000490112 ABCC3O15438 1527 aa16.8■□□□□ 0.28
UBP1-211ENST00000490112 SHANK2Q9UPX8 1470 aa16.8■□□□□ 0.28
UBP1-211ENST00000490112 DEPDC5O75140 1603 aa16.79■□□□□ 0.28
UBP1-211ENST00000490112 ATF5Q9Y2D1 282 aaPredicted RBP16.79■□□□□ 0.28
UBP1-211ENST00000490112 MED14O60244 1454 aa16.79■□□□□ 0.28
UBP1-211ENST00000490112 TOM1O60784 492 aa16.78■□□□□ 0.28
UBP1-211ENST00000490112 SLC4A1APQ9BWU0 796 aaKnown RBP16.78■□□□□ 0.28
UBP1-211ENST00000490112 DUOX2Q9NRD8 1548 aa16.78■□□□□ 0.28
UBP1-211ENST00000490112 SOCS7O14512 581 aa16.77■□□□□ 0.28
UBP1-211ENST00000490112 ILDR2Q71H61 639 aa16.76■□□□□ 0.27
UBP1-211ENST00000490112 NPHP4O75161 1426 aaPredicted RBP16.76■□□□□ 0.27
UBP1-211ENST00000490112 ERVK-7P63135 1459 aa16.74■□□□□ 0.27
UBP1-211ENST00000490112 KIF15Q9NS87 1388 aa16.73■□□□□ 0.27
UBP1-211ENST00000490112 IQGAP1P46940 1657 aa16.72■□□□□ 0.27
UBP1-211ENST00000490112 ERBINQ96RT1 1412 aa16.72■□□□□ 0.27
UBP1-211ENST00000490112 MROH1Q8NDA8 1641 aa16.72■□□□□ 0.27
UBP1-211ENST00000490112 VWDEQ8N2E2 1590 aa16.72■□□□□ 0.27
UBP1-211ENST00000490112 ARHGAP31Q2M1Z3 1444 aa16.71■□□□□ 0.27
UBP1-211ENST00000490112 CEP152O94986 1710 aa16.7■□□□□ 0.26
UBP1-211ENST00000490112 PTPN23Q9H3S7 1636 aa16.7■□□□□ 0.26
UBP1-211ENST00000490112 ABCC5O15440 1437 aa16.7■□□□□ 0.26
UBP1-211ENST00000490112 CROCC2H7BZ55 1655 aa16.69■□□□□ 0.26
UBP1-211ENST00000490112 KANK1Q14678 1352 aa16.69■□□□□ 0.26
UBP1-211ENST00000490112 PIP4K2BP78356 416 aa16.69■□□□□ 0.26
UBP1-211ENST00000490112 RRP7BPQ9NSQ0 103 aa16.69■□□□□ 0.26
UBP1-211ENST00000490112 PRDM15P57071 1507 aaPredicted RBP16.69■□□□□ 0.26
UBP1-211ENST00000490112 UBR1Q8IWV7 1749 aa16.67■□□□□ 0.26
UBP1-211ENST00000490112 SP7Q8TDD2 431 aaPredicted RBP16.67■□□□□ 0.26
UBP1-211ENST00000490112 DAPK1P53355 1430 aa16.67■□□□□ 0.26
UBP1-211ENST00000490112 CFAP65Q6ZU64 1925 aaKnown RBP16.66■□□□□ 0.26
UBP1-211ENST00000490112 HSPA1LP34931 641 aa16.66■□□□□ 0.26
UBP1-211ENST00000490112 FGD6Q6ZV73 1430 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms