RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 FBXO31Q5XUX0 539 aaPredicted RBP25.31■■□□□ 1.64
PLOD3-216ENST00000489927 KDM5DQ9BY66 1539 aa25.31■■□□□ 1.64
PLOD3-216ENST00000489927 ARHGEF5Q12774 1597 aa25.29■■□□□ 1.64
PLOD3-216ENST00000489927 PZPP20742 1482 aa25.28■■□□□ 1.64
PLOD3-216ENST00000489927 FAM135AQ9P2D6 1515 aa25.28■■□□□ 1.64
PLOD3-216ENST00000489927 WASHC2CQ9Y4E1 1318 aa25.28■■□□□ 1.64
PLOD3-216ENST00000489927 TNRQ92752 1358 aa25.28■■□□□ 1.64
PLOD3-216ENST00000489927 VPS8Q8N3P4 1428 aa25.28■■□□□ 1.64
PLOD3-216ENST00000489927 LRRC9Q6ZRR7 1453 aa25.28■■□□□ 1.64
PLOD3-216ENST00000489927 TSPY4P0CV99 314 aa25.26■■□□□ 1.63
PLOD3-216ENST00000489927 TSPY10P0CW01 314 aa25.26■■□□□ 1.63
PLOD3-216ENST00000489927 LOC105371045A0A1W2PR82 267 aa25.25■■□□□ 1.63
PLOD3-216ENST00000489927 ILDR2Q71H61 639 aa25.23■■□□□ 1.63
PLOD3-216ENST00000489927 UBAP1LF5GYI3 381 aa25.22■■□□□ 1.63
PLOD3-216ENST00000489927 SPATA31D1Q6ZQQ2 1576 aa25.2■■□□□ 1.62
PLOD3-216ENST00000489927 NEURL4Q96JN8 1562 aa25.19■■□□□ 1.62
PLOD3-216ENST00000489927 KANK4Q5T7N3 995 aaPredicted RBP25.19■■□□□ 1.62
PLOD3-216ENST00000489927 MIA2Q96PC5 1412 aa25.19■■□□□ 1.62
PLOD3-216ENST00000489927 POLR1AO95602 1720 aaPredicted RBP25.18■■□□□ 1.62
PLOD3-216ENST00000489927 MAST1Q9Y2H9 1570 aa25.18■■□□□ 1.62
PLOD3-216ENST00000489927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.17■■□□□ 1.62
PLOD3-216ENST00000489927 RNF17Q9BXT8 1623 aaKnown RBP25.15■■□□□ 1.62
PLOD3-216ENST00000489927 NLRP1Q9C000 1473 aa25.15■■□□□ 1.62
PLOD3-216ENST00000489927 MAP3K1Q13233 1512 aa25.15■■□□□ 1.62
PLOD3-216ENST00000489927 MYOM3Q5VTT5 1437 aa25.13■■□□□ 1.61
PLOD3-216ENST00000489927 ANKLE2Q86XL3 938 aa25.13■■□□□ 1.61
PLOD3-216ENST00000489927 THEMISQ8N1K5 641 aaPredicted RBP25.13■■□□□ 1.61
PLOD3-216ENST00000489927 UGGT1Q9NYU2 1555 aa25.13■■□□□ 1.61
PLOD3-216ENST00000489927 ABCC3O15438 1527 aa25.12■■□□□ 1.61
PLOD3-216ENST00000489927 SHANK2Q9UPX8 1470 aa25.1■■□□□ 1.61
PLOD3-216ENST00000489927 EIF2AK4Q9P2K8 1649 aaKnown RBP25.1■■□□□ 1.61
PLOD3-216ENST00000489927 ZC3H13Q5T200 1668 aaKnown RBP25.1■■□□□ 1.61
PLOD3-216ENST00000489927 CPS1P31327 1500 aa25.09■■□□□ 1.61
PLOD3-216ENST00000489927 SOCS7O14512 581 aa25.08■■□□□ 1.61
PLOD3-216ENST00000489927 MROH1Q8NDA8 1641 aa25.08■■□□□ 1.6
PLOD3-216ENST00000489927 MED14O60244 1454 aa25.07■■□□□ 1.6
PLOD3-216ENST00000489927 NPHP4O75161 1426 aaPredicted RBP25.06■■□□□ 1.6
PLOD3-216ENST00000489927 DEPDC5O75140 1603 aa25.06■■□□□ 1.6
PLOD3-216ENST00000489927 VWDEQ8N2E2 1590 aa25.05■■□□□ 1.6
PLOD3-216ENST00000489927 ERVK-7P63135 1459 aa25.05■■□□□ 1.6
PLOD3-216ENST00000489927 DUOX2Q9NRD8 1548 aa25.03■■□□□ 1.6
PLOD3-216ENST00000489927 SCAF1Q9H7N4 1312 aaKnown RBP25.02■■□□□ 1.6
PLOD3-216ENST00000489927 PIP4K2BP78356 416 aa25.01■■□□□ 1.59
PLOD3-216ENST00000489927 CEP152O94986 1710 aa25■■□□□ 1.59
PLOD3-216ENST00000489927 TOM1O60784 492 aa25■■□□□ 1.59
PLOD3-216ENST00000489927 IQGAP1P46940 1657 aa25■■□□□ 1.59
PLOD3-216ENST00000489927 ABCC5O15440 1437 aa24.98■■□□□ 1.59
PLOD3-216ENST00000489927 KIF15Q9NS87 1388 aa24.98■■□□□ 1.59
PLOD3-216ENST00000489927 HSPA1LP34931 641 aa24.97■■□□□ 1.59
PLOD3-216ENST00000489927 CROCC2H7BZ55 1655 aa24.96■■□□□ 1.59
PLOD3-216ENST00000489927 PRDM15P57071 1507 aaPredicted RBP24.96■■□□□ 1.59
PLOD3-216ENST00000489927 PTPN23Q9H3S7 1636 aa24.95■■□□□ 1.58
PLOD3-216ENST00000489927 RRP7BPQ9NSQ0 103 aa24.95■■□□□ 1.58
PLOD3-216ENST00000489927 ERBINQ96RT1 1412 aa24.95■■□□□ 1.58
PLOD3-216ENST00000489927 UBR1Q8IWV7 1749 aa24.94■■□□□ 1.58
PLOD3-216ENST00000489927 APLP2Q06481 763 aa24.93■■□□□ 1.58
PLOD3-216ENST00000489927 DAPK1P53355 1430 aa24.92■■□□□ 1.58
PLOD3-216ENST00000489927 ARHGAP31Q2M1Z3 1444 aa24.92■■□□□ 1.58
PLOD3-216ENST00000489927 ALKQ9UM73 1620 aa24.91■■□□□ 1.58
PLOD3-216ENST00000489927 CFAP65Q6ZU64 1925 aaKnown RBP24.9■■□□□ 1.58
PLOD3-216ENST00000489927 STRCP1A6NGW2 1772 aa24.9■■□□□ 1.58
PLOD3-216ENST00000489927 FGD6Q6ZV73 1430 aa24.89■■□□□ 1.58
PLOD3-216ENST00000489927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.89■■□□□ 1.58
PLOD3-216ENST00000489927 LRRC7Q96NW7 1537 aa24.89■■□□□ 1.57
PLOD3-216ENST00000489927 SCAF11Q99590 1463 aaKnown RBP24.89■■□□□ 1.57
PLOD3-216ENST00000489927 LTKP29376 864 aa24.87■■□□□ 1.57
PLOD3-216ENST00000489927 ARHGAP23Q9P227 1491 aa24.87■■□□□ 1.57
PLOD3-216ENST00000489927 SLIT1O75093 1534 aa24.86■■□□□ 1.57
PLOD3-216ENST00000489927 TXNDC2Q86VQ3 553 aa24.85■■□□□ 1.57
PLOD3-216ENST00000489927 SYNMO15061 1565 aa24.84■■□□□ 1.57
PLOD3-216ENST00000489927 MED1Q15648 1581 aaPredicted RBP24.84■■□□□ 1.57
PLOD3-216ENST00000489927 KANK1Q14678 1352 aa24.83■■□□□ 1.57
PLOD3-216ENST00000489927 CHIC2Q9UKJ5 165 aa24.83■■□□□ 1.57
PLOD3-216ENST00000489927 ANKRD30AQ9BXX3 1397 aa24.82■■□□□ 1.56
PLOD3-216ENST00000489927 PIK3C2BO00750 1634 aa24.82■■□□□ 1.56
PLOD3-216ENST00000489927 EID1Q9Y6B2 187 aa24.79■■□□□ 1.56
PLOD3-216ENST00000489927 LMTK2Q8IWU2 1503 aa24.79■■□□□ 1.56
PLOD3-216ENST00000489927 TMEM2Q9UHN6 1383 aa24.79■■□□□ 1.56
PLOD3-216ENST00000489927 SENP3Q9H4L4 574 aaPredicted RBP24.76■■□□□ 1.55
PLOD3-216ENST00000489927 STAG3Q9UJ98 1225 aa24.76■■□□□ 1.55
PLOD3-216ENST00000489927 IDI1Q13907 227 aa24.75■■□□□ 1.55
PLOD3-216ENST00000489927 EFCAB6Q5THR3 1501 aa24.74■■□□□ 1.55
PLOD3-216ENST00000489927 KDM5AP29375 1690 aaKnown RBP24.72■■□□□ 1.55
PLOD3-216ENST00000489927 ADGRL2O95490 1459 aa24.71■■□□□ 1.55
PLOD3-216ENST00000489927 NOS1P29475 1434 aa24.7■■□□□ 1.55
PLOD3-216ENST00000489927 XIRP1Q702N8 1843 aaKnown RBP24.69■■□□□ 1.54
PLOD3-216ENST00000489927 FAM50AQ14320 339 aaKnown RBP24.68■■□□□ 1.54
PLOD3-216ENST00000489927 PHF23Q9BUL5 403 aaPredicted RBP24.67■■□□□ 1.54
PLOD3-216ENST00000489927 ADGRB3O60242 1522 aa24.66■■□□□ 1.54
PLOD3-216ENST00000489927 TET3O43151 1660 aa24.65■■□□□ 1.54
PLOD3-216ENST00000489927 ANKRD50Q9ULJ7 1429 aa24.64■■□□□ 1.54
PLOD3-216ENST00000489927 SLC26A8Q96RN1 970 aa24.64■■□□□ 1.54
PLOD3-216ENST00000489927 SLC52A1Q9NWF4 448 aa24.64■■□□□ 1.54
PLOD3-216ENST00000489927 TMEM94Q12767 1356 aa24.63■■□□□ 1.53
PLOD3-216ENST00000489927 KCNA6P17658 529 aa24.62■■□□□ 1.53
PLOD3-216ENST00000489927 RPRD2Q5VT52 1461 aaKnown RBP24.61■■□□□ 1.53
PLOD3-216ENST00000489927 RBM33Q96EV2 1170 aaKnown RBP24.58■■□□□ 1.53
PLOD3-216ENST00000489927 FAM135BQ49AJ0 1406 aa24.58■■□□□ 1.53
PLOD3-216ENST00000489927 PROSER2Q86WR7 435 aaPredicted RBP24.57■■□□□ 1.52
PLOD3-216ENST00000489927 BCANQ96GW7 911 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms