RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 CEP170BQ9Y4F5 1589 aaPredicted RBP30.65■■■□□ 2.5
TNFRSF1B-202ENST00000489921 KDM5DQ9BY66 1539 aa30.63■■■□□ 2.49
TNFRSF1B-202ENST00000489921 FAM135AQ9P2D6 1515 aa30.63■■■□□ 2.49
TNFRSF1B-202ENST00000489921 NCKAP5LQ9HCH0 1330 aa30.59■■■□□ 2.49
TNFRSF1B-202ENST00000489921 FBXO31Q5XUX0 539 aaPredicted RBP30.59■■■□□ 2.49
TNFRSF1B-202ENST00000489921 LTBP4Q8N2S1 1624 aa30.58■■■□□ 2.49
TNFRSF1B-202ENST00000489921 RNF17Q9BXT8 1623 aaKnown RBP30.58■■■□□ 2.49
TNFRSF1B-202ENST00000489921 PZPP20742 1482 aa30.57■■■□□ 2.48
TNFRSF1B-202ENST00000489921 PLA2R1Q13018 1463 aa30.57■■■□□ 2.48
TNFRSF1B-202ENST00000489921 WASHC2CQ9Y4E1 1318 aa30.56■■■□□ 2.48
TNFRSF1B-202ENST00000489921 DNMT1P26358 1616 aaKnown RBP30.56■■■□□ 2.48
TNFRSF1B-202ENST00000489921 TCOF1Q13428 1488 aaKnown RBP30.56■■■□□ 2.48
TNFRSF1B-202ENST00000489921 A2ML1A8K2U0 1454 aa30.55■■■□□ 2.48
TNFRSF1B-202ENST00000489921 PTPN23Q9H3S7 1636 aa30.53■■■□□ 2.48
TNFRSF1B-202ENST00000489921 EIF2AK4Q9P2K8 1649 aaKnown RBP30.53■■■□□ 2.48
TNFRSF1B-202ENST00000489921 MROH1Q8NDA8 1641 aa30.51■■■□□ 2.48
TNFRSF1B-202ENST00000489921 CROCC2H7BZ55 1655 aa30.51■■■□□ 2.47
TNFRSF1B-202ENST00000489921 TNRQ92752 1358 aa30.51■■■□□ 2.47
TNFRSF1B-202ENST00000489921 ABCC5O15440 1437 aa30.5■■■□□ 2.47
TNFRSF1B-202ENST00000489921 APLP2Q06481 763 aa30.5■■■□□ 2.47
TNFRSF1B-202ENST00000489921 PKD2Q13563 968 aa30.49■■■□□ 2.47
TNFRSF1B-202ENST00000489921 ABCC3O15438 1527 aa30.47■■■□□ 2.47
TNFRSF1B-202ENST00000489921 DUOX2Q9NRD8 1548 aa30.47■■■□□ 2.47
TNFRSF1B-202ENST00000489921 ZC3H13Q5T200 1668 aaKnown RBP30.46■■■□□ 2.47
TNFRSF1B-202ENST00000489921 SHANK2Q9UPX8 1470 aa30.45■■■□□ 2.47
TNFRSF1B-202ENST00000489921 FGD6Q6ZV73 1430 aa30.45■■■□□ 2.46
TNFRSF1B-202ENST00000489921 DAPK1P53355 1430 aa30.41■■■□□ 2.46
TNFRSF1B-202ENST00000489921 CEP152O94986 1710 aa30.41■■■□□ 2.46
TNFRSF1B-202ENST00000489921 ZNF335Q9H4Z2 1342 aaPredicted RBP30.41■■■□□ 2.46
TNFRSF1B-202ENST00000489921 KIF15Q9NS87 1388 aa30.4■■■□□ 2.46
TNFRSF1B-202ENST00000489921 POLR1AO95602 1720 aaPredicted RBP30.39■■■□□ 2.45
TNFRSF1B-202ENST00000489921 IQSEC2Q5JU85 1478 aa30.38■■■□□ 2.45
TNFRSF1B-202ENST00000489921 NLRP1Q9C000 1473 aa30.38■■■□□ 2.45
TNFRSF1B-202ENST00000489921 SPATA31D1Q6ZQQ2 1576 aa30.38■■■□□ 2.45
TNFRSF1B-202ENST00000489921 NEURL4Q96JN8 1562 aa30.38■■■□□ 2.45
TNFRSF1B-202ENST00000489921 RRP7BPQ9NSQ0 103 aa30.37■■■□□ 2.45
TNFRSF1B-202ENST00000489921 ERBINQ96RT1 1412 aa30.35■■■□□ 2.45
TNFRSF1B-202ENST00000489921 CFAP65Q6ZU64 1925 aaKnown RBP30.34■■■□□ 2.45
TNFRSF1B-202ENST00000489921 PRDM15P57071 1507 aaPredicted RBP30.34■■■□□ 2.45
TNFRSF1B-202ENST00000489921 UGGT1Q9NYU2 1555 aa30.33■■■□□ 2.45
TNFRSF1B-202ENST00000489921 ERVK-7P63135 1459 aa30.33■■■□□ 2.45
TNFRSF1B-202ENST00000489921 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.33■■■□□ 2.45
TNFRSF1B-202ENST00000489921 DEPDC5O75140 1603 aa30.32■■■□□ 2.44
TNFRSF1B-202ENST00000489921 THEMISQ8N1K5 641 aaPredicted RBP30.3■■■□□ 2.44
TNFRSF1B-202ENST00000489921 CHIC2Q9UKJ5 165 aa30.28■■■□□ 2.44
TNFRSF1B-202ENST00000489921 ARHGAP31Q2M1Z3 1444 aa30.26■■■□□ 2.43
TNFRSF1B-202ENST00000489921 ANKLE2Q86XL3 938 aa30.25■■■□□ 2.43
TNFRSF1B-202ENST00000489921 MED14O60244 1454 aa30.25■■■□□ 2.43
TNFRSF1B-202ENST00000489921 ANKRD30AQ9BXX3 1397 aa30.24■■■□□ 2.43
TNFRSF1B-202ENST00000489921 UBR1Q8IWV7 1749 aa30.22■■■□□ 2.43
TNFRSF1B-202ENST00000489921 VWDEQ8N2E2 1590 aa30.21■■■□□ 2.43
TNFRSF1B-202ENST00000489921 ADGRL2O95490 1459 aa30.21■■■□□ 2.43
TNFRSF1B-202ENST00000489921 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.2■■■□□ 2.43
TNFRSF1B-202ENST00000489921 NPHP4O75161 1426 aaPredicted RBP30.18■■■□□ 2.42
TNFRSF1B-202ENST00000489921 LMTK2Q8IWU2 1503 aa30.17■■■□□ 2.42
TNFRSF1B-202ENST00000489921 IQGAP1P46940 1657 aa30.15■■■□□ 2.42
TNFRSF1B-202ENST00000489921 FAM50AQ14320 339 aaKnown RBP30.15■■■□□ 2.42
TNFRSF1B-202ENST00000489921 KANK1Q14678 1352 aa30.12■■■□□ 2.41
TNFRSF1B-202ENST00000489921 CPS1P31327 1500 aa30.12■■■□□ 2.41
TNFRSF1B-202ENST00000489921 UBAP1LF5GYI3 381 aa30.1■■■□□ 2.41
TNFRSF1B-202ENST00000489921 ARHGAP23Q9P227 1491 aa30.1■■■□□ 2.41
TNFRSF1B-202ENST00000489921 STRCP1A6NGW2 1772 aa30.09■■■□□ 2.41
TNFRSF1B-202ENST00000489921 PIK3C2BO00750 1634 aa30.09■■■□□ 2.41
TNFRSF1B-202ENST00000489921 SLIT1O75093 1534 aa30.08■■■□□ 2.41
TNFRSF1B-202ENST00000489921 LTKP29376 864 aa30.07■■■□□ 2.4
TNFRSF1B-202ENST00000489921 EFCAB6Q5THR3 1501 aa30.06■■■□□ 2.4
TNFRSF1B-202ENST00000489921 SYNMO15061 1565 aa30.05■■■□□ 2.4
TNFRSF1B-202ENST00000489921 ANKRD50Q9ULJ7 1429 aa30.05■■■□□ 2.4
TNFRSF1B-202ENST00000489921 SCAF11Q99590 1463 aaKnown RBP30.03■■■□□ 2.4
TNFRSF1B-202ENST00000489921 KDM5AP29375 1690 aaKnown RBP30.02■■■□□ 2.4
TNFRSF1B-202ENST00000489921 NOS1P29475 1434 aa30.02■■■□□ 2.4
TNFRSF1B-202ENST00000489921 IDI1Q13907 227 aa30.01■■■□□ 2.39
TNFRSF1B-202ENST00000489921 TXNDC2Q86VQ3 553 aa29.98■■■□□ 2.39
TNFRSF1B-202ENST00000489921 ALKQ9UM73 1620 aa29.97■■■□□ 2.39
TNFRSF1B-202ENST00000489921 TMEM2Q9UHN6 1383 aa29.97■■■□□ 2.39
TNFRSF1B-202ENST00000489921 LRRC7Q96NW7 1537 aa29.95■■■□□ 2.38
TNFRSF1B-202ENST00000489921 PPARGC1BQ86YN6 1023 aaKnown RBP29.94■■■□□ 2.38
TNFRSF1B-202ENST00000489921 UNC13BO14795 1591 aa29.94■■■□□ 2.38
TNFRSF1B-202ENST00000489921 ROCK1Q13464 1354 aa29.93■■■□□ 2.38
TNFRSF1B-202ENST00000489921 TET3O43151 1660 aa29.93■■■□□ 2.38
TNFRSF1B-202ENST00000489921 DISP3Q9P2K9 1392 aa29.92■■■□□ 2.38
TNFRSF1B-202ENST00000489921 RPRD2Q5VT52 1461 aaKnown RBP29.92■■■□□ 2.38
TNFRSF1B-202ENST00000489921 TOM1O60784 492 aa29.9■■■□□ 2.38
TNFRSF1B-202ENST00000489921 EID1Q9Y6B2 187 aa29.9■■■□□ 2.38
TNFRSF1B-202ENST00000489921 ADGRB3O60242 1522 aa29.89■■■□□ 2.38
TNFRSF1B-202ENST00000489921 GCC2Q8IWJ2 1684 aa29.88■■■□□ 2.37
TNFRSF1B-202ENST00000489921 STAG3Q9UJ98 1225 aa29.88■■■□□ 2.37
TNFRSF1B-202ENST00000489921 SLC52A1Q9NWF4 448 aa29.87■■■□□ 2.37
TNFRSF1B-202ENST00000489921 PIP4K2BP78356 416 aa29.86■■■□□ 2.37
TNFRSF1B-202ENST00000489921 XIRP1Q702N8 1843 aaKnown RBP29.85■■■□□ 2.37
TNFRSF1B-202ENST00000489921 ILDR2Q71H61 639 aa29.85■■■□□ 2.37
TNFRSF1B-202ENST00000489921 MYO5BQ9ULV0 1848 aa29.85■■■□□ 2.37
TNFRSF1B-202ENST00000489921 E9PCH4 1651 aa29.84■■■□□ 2.37
TNFRSF1B-202ENST00000489921 HSPA1LP34931 641 aa29.83■■■□□ 2.37
TNFRSF1B-202ENST00000489921 IQGAP3Q86VI3 1631 aa29.82■■■□□ 2.36
TNFRSF1B-202ENST00000489921 SCAF1Q9H7N4 1312 aaKnown RBP29.81■■■□□ 2.36
TNFRSF1B-202ENST00000489921 TMEM131LA2VDJ0 1609 aa29.79■■■□□ 2.36
TNFRSF1B-202ENST00000489921 ITGAEP38570 1179 aa29.79■■■□□ 2.36
TNFRSF1B-202ENST00000489921 ZFYVE9O95405 1425 aa29.77■■■□□ 2.36
TNFRSF1B-202ENST00000489921 SLC26A8Q96RN1 970 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms