RNA–Protein interactions for RNA: ENST00000489876.1

HUWE1-213, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene HUWE1, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-213ENST00000489876 CD109Q6YHK3 1445 aa13.4□□□□□ -0.26
HUWE1-213ENST00000489876 PDAP1Q13442 181 aaKnown RBP13.4□□□□□ -0.26
HUWE1-213ENST00000489876 ABCA9Q8IUA7 1624 aa13.39□□□□□ -0.27
HUWE1-213ENST00000489876 MAGI3Q5TCQ9 1506 aa13.37□□□□□ -0.27
HUWE1-213ENST00000489876 POTEMA6NI47 508 aa13.36□□□□□ -0.27
HUWE1-213ENST00000489876 FAM163AQ96GL9 167 aaPredicted RBP13.36□□□□□ -0.27
HUWE1-213ENST00000489876 TTC37Q6PGP7 1564 aa13.36□□□□□ -0.27
HUWE1-213ENST00000489876 POTEGQ6S5H5 508 aa13.35□□□□□ -0.27
HUWE1-213ENST00000489876 RNF25Q96BH1 459 aaPredicted RBP13.35□□□□□ -0.27
HUWE1-213ENST00000489876 ATP1B4Q9UN42 357 aaPredicted RBP13.35□□□□□ -0.27
HUWE1-213ENST00000489876 PCF11O94913 1555 aaKnown RBP13.35□□□□□ -0.27
HUWE1-213ENST00000489876 TEX14Q8IWB6 1497 aa13.35□□□□□ -0.27
HUWE1-213ENST00000489876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.34□□□□□ -0.27
HUWE1-213ENST00000489876 KIF14Q15058 1648 aa13.33□□□□□ -0.28
HUWE1-213ENST00000489876 HECW1Q76N89 1606 aa13.33□□□□□ -0.28
HUWE1-213ENST00000489876 KDM4FA0A1W2PPD8 638 aa13.33□□□□□ -0.28
HUWE1-213ENST00000489876 MKRN3Q13064 507 aaKnown RBP13.33□□□□□ -0.28
HUWE1-213ENST00000489876 SLAIN1Q8ND83 568 aa13.33□□□□□ -0.28
HUWE1-213ENST00000489876 CABP2Q9NPB3 220 aa13.33□□□□□ -0.28
HUWE1-213ENST00000489876 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
HUWE1-213ENST00000489876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.31□□□□□ -0.28
HUWE1-213ENST00000489876 FRMPD1Q5SYB0 1578 aa13.3□□□□□ -0.28
HUWE1-213ENST00000489876 LOC105371045A0A1W2PR82 267 aa13.3□□□□□ -0.28
HUWE1-213ENST00000489876 DPY19L2Q6NUT2 758 aa13.3□□□□□ -0.28
HUWE1-213ENST00000489876 FMN1Q68DA7 1419 aa13.3□□□□□ -0.28
HUWE1-213ENST00000489876 ILDR1Q86SU0 546 aaPredicted RBP13.29□□□□□ -0.28
HUWE1-213ENST00000489876 CLIP1P30622 1438 aa13.29□□□□□ -0.28
HUWE1-213ENST00000489876 PLEKHD1A6NEE1 506 aa13.28□□□□□ -0.28
HUWE1-213ENST00000489876 RAPGEF3O95398 923 aa13.27□□□□□ -0.29
HUWE1-213ENST00000489876 ARAP3Q8WWN8 1544 aa13.26□□□□□ -0.29
HUWE1-213ENST00000489876 RICTORQ6R327 1708 aa13.25□□□□□ -0.29
HUWE1-213ENST00000489876 ADGRL1O94910 1474 aa13.24□□□□□ -0.29
HUWE1-213ENST00000489876 CASKIN1Q8WXD9 1431 aa13.24□□□□□ -0.29
HUWE1-213ENST00000489876 MYO5CQ9NQX4 1742 aa13.24□□□□□ -0.29
HUWE1-213ENST00000489876 SIGLEC1Q9BZZ2 1709 aa13.23□□□□□ -0.29
HUWE1-213ENST00000489876 CDC42BPBQ9Y5S2 1711 aa13.22□□□□□ -0.29
HUWE1-213ENST00000489876 RIOK3O14730 519 aaKnown RBP13.22□□□□□ -0.29
HUWE1-213ENST00000489876 EFCAB3Q8N7B9 438 aa13.22□□□□□ -0.29
HUWE1-213ENST00000489876 NEO1Q92859 1461 aa13.22□□□□□ -0.29
HUWE1-213ENST00000489876 TROQ12816 1431 aaPredicted RBP13.22□□□□□ -0.29
HUWE1-213ENST00000489876 CEP162Q5TB80 1403 aa13.22□□□□□ -0.29
HUWE1-213ENST00000489876 FANCAO15360 1455 aa13.21□□□□□ -0.3
HUWE1-213ENST00000489876 AKNAQ7Z591 1439 aa13.21□□□□□ -0.3
HUWE1-213ENST00000489876 CDC42BPAQ5VT25 1732 aa13.19□□□□□ -0.3
HUWE1-213ENST00000489876 FYCO1Q9BQS8 1478 aa13.19□□□□□ -0.3
HUWE1-213ENST00000489876 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.19□□□□□ -0.3
HUWE1-213ENST00000489876 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
HUWE1-213ENST00000489876 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.19□□□□□ -0.3
HUWE1-213ENST00000489876 PLCH2O75038 1416 aa13.18□□□□□ -0.3
HUWE1-213ENST00000489876 ST18O60284 1047 aa13.17□□□□□ -0.3
HUWE1-213ENST00000489876 CFAP74Q9C0B2 1584 aa13.16□□□□□ -0.3
HUWE1-213ENST00000489876 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
HUWE1-213ENST00000489876 DENND4BO75064 1496 aaPredicted RBP13.16□□□□□ -0.3
HUWE1-213ENST00000489876 YEATS2Q9ULM3 1422 aa13.15□□□□□ -0.3
HUWE1-213ENST00000489876 PREX2Q70Z35 1606 aa13.15□□□□□ -0.3
HUWE1-213ENST00000489876 PLSCR2Q9NRY7 297 aa13.15□□□□□ -0.3
HUWE1-213ENST00000489876 CCDC18Q5T9S5 1454 aa13.15□□□□□ -0.3
HUWE1-213ENST00000489876 SCAPERQ9BY12 1400 aa13.13□□□□□ -0.31
HUWE1-213ENST00000489876 ARHGAP5Q13017 1502 aa13.13□□□□□ -0.31
HUWE1-213ENST00000489876 ARHGEF40Q8TER5 1519 aa13.13□□□□□ -0.31
HUWE1-213ENST00000489876 ARHGEF12Q9NZN5 1544 aa13.13□□□□□ -0.31
HUWE1-213ENST00000489876 PHLDB1Q86UU1 1377 aa13.13□□□□□ -0.31
HUWE1-213ENST00000489876 C3orf67Q6ZVT6 689 aa13.13□□□□□ -0.31
HUWE1-213ENST00000489876 VGFO15240 615 aaPredicted RBP13.12□□□□□ -0.31
HUWE1-213ENST00000489876 PKD2Q13563 968 aa13.12□□□□□ -0.31
HUWE1-213ENST00000489876 ZMYM4Q5VZL5 1548 aa13.12□□□□□ -0.31
HUWE1-213ENST00000489876 ADAMTSL3P82987 1691 aa13.12□□□□□ -0.31
HUWE1-213ENST00000489876 CDK11AQ9UQ88 783 aaPredicted RBP13.11□□□□□ -0.31
HUWE1-213ENST00000489876 POGZQ7Z3K3 1410 aa13.11□□□□□ -0.31
HUWE1-213ENST00000489876 ITSN2Q9NZM3 1697 aa13.11□□□□□ -0.31
HUWE1-213ENST00000489876 BCORL1Q5H9F3 1711 aa13.1□□□□□ -0.31
HUWE1-213ENST00000489876 SAMD9LQ8IVG5 1584 aa13.09□□□□□ -0.31
HUWE1-213ENST00000489876 AFAP1Q8N556 730 aa13.09□□□□□ -0.31
HUWE1-213ENST00000489876 MS4A4AQ96JQ5 239 aa13.09□□□□□ -0.31
HUWE1-213ENST00000489876 BOLA1Q9Y3E2 137 aa13.09□□□□□ -0.31
HUWE1-213ENST00000489876 MADDQ8WXG6 1647 aa13.09□□□□□ -0.31
HUWE1-213ENST00000489876 ZFYVE16Q7Z3T8 1539 aa13.08□□□□□ -0.31
HUWE1-213ENST00000489876 TRAPPC8Q9Y2L5 1435 aa13.08□□□□□ -0.32
HUWE1-213ENST00000489876 EFCAB2Q5VUJ9 269 aa13.08□□□□□ -0.32
HUWE1-213ENST00000489876 ABCC1P33527 1531 aa13.08□□□□□ -0.32
HUWE1-213ENST00000489876 GPATCH8Q9UKJ3 1502 aaKnown RBP13.08□□□□□ -0.32
HUWE1-213ENST00000489876 RIMS1Q86UR5 1692 aaKnown RBP13.06□□□□□ -0.32
HUWE1-213ENST00000489876 ECM2O94769 699 aaPredicted RBP13.06□□□□□ -0.32
HUWE1-213ENST00000489876 PHF8Q9UPP1 1060 aa13.06□□□□□ -0.32
HUWE1-213ENST00000489876 KDM5CP41229 1560 aa13.06□□□□□ -0.32
HUWE1-213ENST00000489876 TIAM1Q13009 1591 aa13.06□□□□□ -0.32
HUWE1-213ENST00000489876 ABCA6Q8N139 1617 aa13.06□□□□□ -0.32
HUWE1-213ENST00000489876 RGL2O15211 777 aa13.05□□□□□ -0.32
HUWE1-213ENST00000489876 KIDINS220Q9ULH0 1771 aa13.04□□□□□ -0.32
HUWE1-213ENST00000489876 DIP2CQ9Y2E4 1556 aa13.04□□□□□ -0.32
HUWE1-213ENST00000489876 TMEM121BQ9BXQ6 578 aaPredicted RBP13.04□□□□□ -0.32
HUWE1-213ENST00000489876 BCL11BQ9C0K0 894 aaPredicted RBP13.04□□□□□ -0.32
HUWE1-213ENST00000489876 ZNF777Q9ULD5 760 aaPredicted RBP13.04□□□□□ -0.32
HUWE1-213ENST00000489876 SYCP2Q9BX26 1530 aa13.03□□□□□ -0.32
HUWE1-213ENST00000489876 ARID4BQ4LE39 1312 aaPredicted RBP13.03□□□□□ -0.32
HUWE1-213ENST00000489876 ZNF644Q9H582 1327 aaPredicted RBP13.03□□□□□ -0.32
HUWE1-213ENST00000489876 MTUS2Q5JR59 1369 aa13.03□□□□□ -0.32
HUWE1-213ENST00000489876 VPS8Q8N3P4 1428 aa13.03□□□□□ -0.32
HUWE1-213ENST00000489876 EHBP1L1Q8N3D4 1523 aa13.03□□□□□ -0.32
HUWE1-213ENST00000489876 HECW2Q9P2P5 1572 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms