RNA–Protein interactions for RNA: ENST00000489839.1

GABBR1-217, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 407 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-217ENST00000489839 CEP170BQ9Y4F5 1589 aaPredicted RBP17.42■□□□□ 0.38
GABBR1-217ENST00000489839 DMRT2Q9Y5R5 561 aa17.42■□□□□ 0.38
GABBR1-217ENST00000489839 NCKAP5LQ9HCH0 1330 aa17.42■□□□□ 0.38
GABBR1-217ENST00000489839 KDM5DQ9BY66 1539 aa17.41■□□□□ 0.38
GABBR1-217ENST00000489839 PTPN23Q9H3S7 1636 aa17.4■□□□□ 0.38
GABBR1-217ENST00000489839 MROH1Q8NDA8 1641 aa17.39■□□□□ 0.37
GABBR1-217ENST00000489839 RNF17Q9BXT8 1623 aaKnown RBP17.39■□□□□ 0.37
GABBR1-217ENST00000489839 ABCC5O15440 1437 aa17.38■□□□□ 0.37
GABBR1-217ENST00000489839 DNMT1P26358 1616 aaKnown RBP17.38■□□□□ 0.37
GABBR1-217ENST00000489839 LTBP4Q8N2S1 1624 aa17.38■□□□□ 0.37
GABBR1-217ENST00000489839 WASHC2CQ9Y4E1 1318 aa17.38■□□□□ 0.37
GABBR1-217ENST00000489839 CROCC2H7BZ55 1655 aa17.38■□□□□ 0.37
GABBR1-217ENST00000489839 PZPP20742 1482 aa17.37■□□□□ 0.37
GABBR1-217ENST00000489839 APLP2Q06481 763 aa17.37■□□□□ 0.37
GABBR1-217ENST00000489839 CFAP65Q6ZU64 1925 aaKnown RBP17.37■□□□□ 0.37
GABBR1-217ENST00000489839 A2ML1A8K2U0 1454 aa17.37■□□□□ 0.37
GABBR1-217ENST00000489839 TNRQ92752 1358 aa17.36■□□□□ 0.37
GABBR1-217ENST00000489839 FGD6Q6ZV73 1430 aa17.36■□□□□ 0.37
GABBR1-217ENST00000489839 TCOF1Q13428 1488 aaKnown RBP17.36■□□□□ 0.37
GABBR1-217ENST00000489839 FAM135AQ9P2D6 1515 aa17.36■□□□□ 0.37
GABBR1-217ENST00000489839 PLA2R1Q13018 1463 aa17.35■□□□□ 0.37
GABBR1-217ENST00000489839 ABCC3O15438 1527 aa17.35■□□□□ 0.37
GABBR1-217ENST00000489839 EIF2AK4Q9P2K8 1649 aaKnown RBP17.35■□□□□ 0.37
GABBR1-217ENST00000489839 CEP152O94986 1710 aa17.34■□□□□ 0.37
GABBR1-217ENST00000489839 DAPK1P53355 1430 aa17.33■□□□□ 0.36
GABBR1-217ENST00000489839 DUOX2Q9NRD8 1548 aa17.32■□□□□ 0.36
GABBR1-217ENST00000489839 SHANK2Q9UPX8 1470 aa17.31■□□□□ 0.36
GABBR1-217ENST00000489839 KIF15Q9NS87 1388 aa17.31■□□□□ 0.36
GABBR1-217ENST00000489839 ZNF335Q9H4Z2 1342 aaPredicted RBP17.31■□□□□ 0.36
GABBR1-217ENST00000489839 RRP7BPQ9NSQ0 103 aa17.31■□□□□ 0.36
GABBR1-217ENST00000489839 ZC3H13Q5T200 1668 aaKnown RBP17.3■□□□□ 0.36
GABBR1-217ENST00000489839 PKD2Q13563 968 aa17.3■□□□□ 0.36
GABBR1-217ENST00000489839 NEURL4Q96JN8 1562 aa17.29■□□□□ 0.36
GABBR1-217ENST00000489839 CHIC2Q9UKJ5 165 aa17.29■□□□□ 0.36
GABBR1-217ENST00000489839 SPATA31D1Q6ZQQ2 1576 aa17.28■□□□□ 0.36
GABBR1-217ENST00000489839 POLR1AO95602 1720 aaPredicted RBP17.27■□□□□ 0.36
GABBR1-217ENST00000489839 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.27■□□□□ 0.35
GABBR1-217ENST00000489839 ERVK-7P63135 1459 aa17.26■□□□□ 0.35
GABBR1-217ENST00000489839 PRDM15P57071 1507 aaPredicted RBP17.26■□□□□ 0.35
GABBR1-217ENST00000489839 ERBINQ96RT1 1412 aa17.25■□□□□ 0.35
GABBR1-217ENST00000489839 NLRP1Q9C000 1473 aa17.24■□□□□ 0.35
GABBR1-217ENST00000489839 UGGT1Q9NYU2 1555 aa17.24■□□□□ 0.35
GABBR1-217ENST00000489839 DEPDC5O75140 1603 aa17.24■□□□□ 0.35
GABBR1-217ENST00000489839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.22■□□□□ 0.35
GABBR1-217ENST00000489839 FAM50AQ14320 339 aaKnown RBP17.21■□□□□ 0.35
GABBR1-217ENST00000489839 ANKRD30AQ9BXX3 1397 aa17.2■□□□□ 0.34
GABBR1-217ENST00000489839 THEMISQ8N1K5 641 aaPredicted RBP17.2■□□□□ 0.34
GABBR1-217ENST00000489839 VWDEQ8N2E2 1590 aa17.19■□□□□ 0.34
GABBR1-217ENST00000489839 ADGRL2O95490 1459 aa17.19■□□□□ 0.34
GABBR1-217ENST00000489839 IQSEC2Q5JU85 1478 aa17.19■□□□□ 0.34
GABBR1-217ENST00000489839 UBR1Q8IWV7 1749 aa17.19■□□□□ 0.34
GABBR1-217ENST00000489839 ARHGAP31Q2M1Z3 1444 aa17.19■□□□□ 0.34
GABBR1-217ENST00000489839 ANKLE2Q86XL3 938 aa17.18■□□□□ 0.34
GABBR1-217ENST00000489839 PPARGC1BQ86YN6 1023 aaKnown RBP17.18■□□□□ 0.34
GABBR1-217ENST00000489839 MED14O60244 1454 aa17.17■□□□□ 0.34
GABBR1-217ENST00000489839 NPHP4O75161 1426 aaPredicted RBP17.16■□□□□ 0.34
GABBR1-217ENST00000489839 LMTK2Q8IWU2 1503 aa17.15■□□□□ 0.34
GABBR1-217ENST00000489839 STRCP1A6NGW2 1772 aa17.15■□□□□ 0.34
GABBR1-217ENST00000489839 IQGAP1P46940 1657 aa17.14■□□□□ 0.33
GABBR1-217ENST00000489839 PIK3C2BO00750 1634 aa17.14■□□□□ 0.33
GABBR1-217ENST00000489839 SYNMO15061 1565 aa17.12■□□□□ 0.33
GABBR1-217ENST00000489839 LTKP29376 864 aa17.12■□□□□ 0.33
GABBR1-217ENST00000489839 KANK1Q14678 1352 aa17.12■□□□□ 0.33
GABBR1-217ENST00000489839 ARHGAP23Q9P227 1491 aa17.12■□□□□ 0.33
GABBR1-217ENST00000489839 UBAP1LF5GYI3 381 aa17.11■□□□□ 0.33
GABBR1-217ENST00000489839 ANKRD50Q9ULJ7 1429 aa17.11■□□□□ 0.33
GABBR1-217ENST00000489839 EFCAB6Q5THR3 1501 aa17.1■□□□□ 0.33
GABBR1-217ENST00000489839 IDI1Q13907 227 aa17.09■□□□□ 0.33
GABBR1-217ENST00000489839 SLIT1O75093 1534 aa17.09■□□□□ 0.33
GABBR1-217ENST00000489839 CPS1P31327 1500 aa17.08■□□□□ 0.32
GABBR1-217ENST00000489839 NOS1P29475 1434 aa17.08■□□□□ 0.32
GABBR1-217ENST00000489839 SCAF11Q99590 1463 aaKnown RBP17.07■□□□□ 0.32
GABBR1-217ENST00000489839 TXNDC2Q86VQ3 553 aa17.06■□□□□ 0.32
GABBR1-217ENST00000489839 ALKQ9UM73 1620 aa17.06■□□□□ 0.32
GABBR1-217ENST00000489839 MYO5BQ9ULV0 1848 aa17.05■□□□□ 0.32
GABBR1-217ENST00000489839 TMEM2Q9UHN6 1383 aa17.04■□□□□ 0.32
GABBR1-217ENST00000489839 UNC13BO14795 1591 aa17.04■□□□□ 0.32
GABBR1-217ENST00000489839 ITGAEP38570 1179 aa17.04■□□□□ 0.32
GABBR1-217ENST00000489839 TET3O43151 1660 aa17.04■□□□□ 0.32
GABBR1-217ENST00000489839 KDM5AP29375 1690 aaKnown RBP17.03■□□□□ 0.32
GABBR1-217ENST00000489839 ROCK1Q13464 1354 aa17.02■□□□□ 0.32
GABBR1-217ENST00000489839 LRRC7Q96NW7 1537 aa17.02■□□□□ 0.32
GABBR1-217ENST00000489839 GCC2Q8IWJ2 1684 aa17.01■□□□□ 0.31
GABBR1-217ENST00000489839 E9PCH4 1651 aa17.01■□□□□ 0.31
GABBR1-217ENST00000489839 XIRP1Q702N8 1843 aaKnown RBP17■□□□□ 0.31
GABBR1-217ENST00000489839 PIP4K2BP78356 416 aa17■□□□□ 0.31
GABBR1-217ENST00000489839 STAG3Q9UJ98 1225 aa17■□□□□ 0.31
GABBR1-217ENST00000489839 ADGRB3O60242 1522 aa17■□□□□ 0.31
GABBR1-217ENST00000489839 DISP3Q9P2K9 1392 aa16.99■□□□□ 0.31
GABBR1-217ENST00000489839 RPRD2Q5VT52 1461 aaKnown RBP16.99■□□□□ 0.31
GABBR1-217ENST00000489839 ILDR2Q71H61 639 aa16.98■□□□□ 0.31
GABBR1-217ENST00000489839 EID1Q9Y6B2 187 aa16.98■□□□□ 0.31
GABBR1-217ENST00000489839 IQGAP3Q86VI3 1631 aa16.97■□□□□ 0.31
GABBR1-217ENST00000489839 HSPA1LP34931 641 aa16.97■□□□□ 0.31
GABBR1-217ENST00000489839 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.31
GABBR1-217ENST00000489839 SENP3Q9H4L4 574 aaPredicted RBP16.96■□□□□ 0.31
GABBR1-217ENST00000489839 SLC52A1Q9NWF4 448 aa16.96■□□□□ 0.31
GABBR1-217ENST00000489839 TMEM131LA2VDJ0 1609 aa16.96■□□□□ 0.3
GABBR1-217ENST00000489839 TOM1O60784 492 aa16.95■□□□□ 0.3
GABBR1-217ENST00000489839 SLC26A8Q96RN1 970 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms