RNA–Protein interactions for RNA: ENST00000489707.5

PTK7-216, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-216ENST00000489707 TRAPPC8Q9Y2L5 1435 aa21.47■■□□□ 1.03
PTK7-216ENST00000489707 ZFYVE16Q7Z3T8 1539 aa21.47■■□□□ 1.03
PTK7-216ENST00000489707 FANCAO15360 1455 aa21.46■■□□□ 1.03
PTK7-216ENST00000489707 C11orf95C9JLR9 678 aaPredicted RBP21.45■■□□□ 1.02
PTK7-216ENST00000489707 ROCK2O75116 1388 aaKnown RBP21.45■■□□□ 1.02
PTK7-216ENST00000489707 DCAF11Q8TEB1 546 aa21.44■■□□□ 1.02
PTK7-216ENST00000489707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.44■■□□□ 1.029e-6■□□□□ 10.7
PTK7-216ENST00000489707 CARD11Q9BXL7 1154 aa21.43■■□□□ 1.02
PTK7-216ENST00000489707 BCORL1Q5H9F3 1711 aa21.43■■□□□ 1.02
PTK7-216ENST00000489707 EIF2AK4Q9P2K8 1649 aaKnown RBP21.43■■□□□ 1.02
PTK7-216ENST00000489707 INO80Q9ULG1 1556 aaPredicted RBP21.43■■□□□ 1.02
PTK7-216ENST00000489707 TRPM1Q7Z4N2 1603 aa21.42■■□□□ 1.02
PTK7-216ENST00000489707 OSCARQ8IYS5 282 aa21.42■■□□□ 1.02
PTK7-216ENST00000489707 DEPDC5O75140 1603 aa21.42■■□□□ 1.02
PTK7-216ENST00000489707 ATP7AQ04656 1500 aa21.41■■□□□ 1.02
PTK7-216ENST00000489707 LAMC1P11047 1609 aa21.41■■□□□ 1.02
PTK7-216ENST00000489707 ASXL2Q76L83 1435 aa21.41■■□□□ 1.02
PTK7-216ENST00000489707 PLA2R1Q13018 1463 aa21.4■■□□□ 1.02
PTK7-216ENST00000489707 PRKRIP1Q9H875 184 aaPredicted RBP21.4■■□□□ 1.02
PTK7-216ENST00000489707 CFAP74Q9C0B2 1584 aa21.39■■□□□ 1.01
PTK7-216ENST00000489707 PRAG1Q86YV5 1406 aa21.39■■□□□ 1.01
PTK7-216ENST00000489707 NPM1P06748 294 aaKnown RBP eCLIP21.39■■□□□ 1.01
PTK7-216ENST00000489707 ADGRL1O94910 1474 aa21.38■■□□□ 1.01
PTK7-216ENST00000489707 KDM2AQ9Y2K7 1162 aa21.38■■□□□ 1.01
PTK7-216ENST00000489707 SUPT16HQ9Y5B9 1047 aaKnown RBP21.37■■□□□ 1.01
PTK7-216ENST00000489707 TET3O43151 1660 aa21.36■■□□□ 1.01
PTK7-216ENST00000489707 KANK1Q14678 1352 aa21.35■■□□□ 1.01
PTK7-216ENST00000489707 E9PCH4 1651 aa21.35■■□□□ 1.01
PTK7-216ENST00000489707 A2MP01023 1474 aa21.34■■□□□ 1.01
PTK7-216ENST00000489707 AFAP1Q8N556 730 aa21.34■■□□□ 1.01
PTK7-216ENST00000489707 SPHKAPQ2M3C7 1700 aa21.34■■□□□ 1.01
PTK7-216ENST00000489707 SCAPERQ9BY12 1400 aa21.32■■□□□ 1
PTK7-216ENST00000489707 TRPM2O94759 1503 aa21.32■■□□□ 1
PTK7-216ENST00000489707 GPRASP1Q5JY77 1395 aa21.32■■□□□ 1
PTK7-216ENST00000489707 CEP152O94986 1710 aa21.32■■□□□ 1
PTK7-216ENST00000489707 STAC3Q96MF2 364 aa21.31■■□□□ 1
PTK7-216ENST00000489707 NEFLP07196 543 aa21.29■■□□□ 1
PTK7-216ENST00000489707 ZNF518AQ6AHZ1 1483 aa21.29■■□□□ 1
PTK7-216ENST00000489707 VWDEQ8N2E2 1590 aa21.29■■□□□ 1
PTK7-216ENST00000489707 HNRNPUQ00839 825 aaKnown RBP eCLIP21.29■■□□□ 1
PTK7-216ENST00000489707 PRDM15P57071 1507 aaPredicted RBP21.28■■□□□ 1
PTK7-216ENST00000489707 RGL3Q3MIN7 710 aa21.28■■□□□ 1
PTK7-216ENST00000489707 DHX29Q7Z478 1369 aaKnown RBP21.27■■□□□ 1
PTK7-216ENST00000489707 MRS2Q9HD23 443 aa21.27■■□□□ 1
PTK7-216ENST00000489707 ST20-MTHFSA0A0A6YYL1 179 aa21.27■■□□□ 1
PTK7-216ENST00000489707 KTN1Q86UP2 1357 aaKnown RBP21.26■□□□□ 0.99
PTK7-216ENST00000489707 PTPRTO14522 1441 aa21.26■□□□□ 0.99
PTK7-216ENST00000489707 POLR3GLQ9BT43 218 aa21.25■□□□□ 0.99
PTK7-216ENST00000489707 MYT1LQ9UL68 1186 aa21.25■□□□□ 0.99
PTK7-216ENST00000489707 NEURL4Q96JN8 1562 aa21.25■□□□□ 0.99
PTK7-216ENST00000489707 RNF17Q9BXT8 1623 aaKnown RBP21.24■□□□□ 0.99
PTK7-216ENST00000489707 KIDINS220Q9ULH0 1771 aa21.24■□□□□ 0.99
PTK7-216ENST00000489707 CD109Q6YHK3 1445 aa21.21■□□□□ 0.99
PTK7-216ENST00000489707 CLTCL1P53675 1640 aa21.2■□□□□ 0.98
PTK7-216ENST00000489707 KIF3BO15066 747 aa21.19■□□□□ 0.98
PTK7-216ENST00000489707 MROH1Q8NDA8 1641 aa21.19■□□□□ 0.98
PTK7-216ENST00000489707 MADDQ8WXG6 1647 aa21.19■□□□□ 0.98
PTK7-216ENST00000489707 POGZQ7Z3K3 1410 aa21.17■□□□□ 0.98
PTK7-216ENST00000489707 KIF1BO60333 1816 aa21.17■□□□□ 0.98
PTK7-216ENST00000489707 EFCAB6Q5THR3 1501 aa21.16■□□□□ 0.98
PTK7-216ENST00000489707 KIAA1210Q9ULL0 1709 aa21.16■□□□□ 0.98
PTK7-216ENST00000489707 HECW2Q9P2P5 1572 aa21.16■□□□□ 0.98
PTK7-216ENST00000489707 FAM9BQ8IZU0 186 aa21.16■□□□□ 0.98
PTK7-216ENST00000489707 MLH3Q9UHC1 1453 aa21.16■□□□□ 0.98
PTK7-216ENST00000489707 COL17A1Q9UMD9 1497 aaPredicted RBP21.16■□□□□ 0.98
PTK7-216ENST00000489707 LMTK2Q8IWU2 1503 aa21.16■□□□□ 0.98
PTK7-216ENST00000489707 FKBP8Q14318 412 aa21.16■□□□□ 0.98
PTK7-216ENST00000489707 CCDC184Q52MB2 194 aa21.16■□□□□ 0.98
PTK7-216ENST00000489707 ZBED9Q6R2W3 1325 aa21.15■□□□□ 0.98
PTK7-216ENST00000489707 NBPF1Q3BBV0 1214 aa21.15■□□□□ 0.98
PTK7-216ENST00000489707 NEO1Q92859 1461 aa21.14■□□□□ 0.98
PTK7-216ENST00000489707 RALBP1Q15311 655 aa21.14■□□□□ 0.97
PTK7-216ENST00000489707 IQGAP1P46940 1657 aa21.13■□□□□ 0.97
PTK7-216ENST00000489707 TMF1P82094 1093 aa21.11■□□□□ 0.97
PTK7-216ENST00000489707 WASHC2CQ9Y4E1 1318 aa21.1■□□□□ 0.97
PTK7-216ENST00000489707 PPRC1Q5VV67 1664 aaKnown RBP21.09■□□□□ 0.97
PTK7-216ENST00000489707 BRD4O60885 1362 aaPredicted RBP21.08■□□□□ 0.97
PTK7-216ENST00000489707 MYBBP1AQ9BQG0 1328 aaKnown RBP21.08■□□□□ 0.97
PTK7-216ENST00000489707 MYOM2P54296 1465 aa21.07■□□□□ 0.96
PTK7-216ENST00000489707 TMC1Q8TDI8 760 aa21.07■□□□□ 0.96
PTK7-216ENST00000489707 TESK2Q96S53 571 aa21.07■□□□□ 0.96
PTK7-216ENST00000489707 EIF3AQ14152 1382 aaKnown RBP21.06■□□□□ 0.96
PTK7-216ENST00000489707 SCAF11Q99590 1463 aaKnown RBP21.06■□□□□ 0.96
PTK7-216ENST00000489707 IFT172Q9UG01 1749 aa21.05■□□□□ 0.96
PTK7-216ENST00000489707 SLC24A1O60721 1099 aa21.05■□□□□ 0.96
PTK7-216ENST00000489707 CDCA8Q53HL2 280 aa21.05■□□□□ 0.96
PTK7-216ENST00000489707 MAP3K4Q9Y6R4 1608 aa21.05■□□□□ 0.96
PTK7-216ENST00000489707 ABCA6Q8N139 1617 aa21.03■□□□□ 0.96
PTK7-216ENST00000489707 ERICH6BQ5W0A0 696 aa21.03■□□□□ 0.96
PTK7-216ENST00000489707 FRMPD1Q5SYB0 1578 aa21.03■□□□□ 0.96
PTK7-216ENST00000489707 DISP3Q9P2K9 1392 aa21.02■□□□□ 0.96
PTK7-216ENST00000489707 PARD3Q8TEW0 1356 aa21.01■□□□□ 0.95
PTK7-216ENST00000489707 GLI2P10070 1586 aa21■□□□□ 0.95
PTK7-216ENST00000489707 PNISRQ8TF01 805 aaKnown RBP21■□□□□ 0.95
PTK7-216ENST00000489707 DNAJC5Q9H3Z4 198 aa20.99■□□□□ 0.95
PTK7-216ENST00000489707 NLRP13Q86W25 1043 aa20.98■□□□□ 0.95
PTK7-216ENST00000489707 RICTORQ6R327 1708 aa20.98■□□□□ 0.95
PTK7-216ENST00000489707 CNGB1Q14028 1251 aaPredicted RBP20.98■□□□□ 0.95
PTK7-216ENST00000489707 ZC3H13Q5T200 1668 aaKnown RBP20.97■□□□□ 0.95
PTK7-216ENST00000489707 ADGRB3O60242 1522 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms