RNA–Protein interactions for RNA: ENST00000489698.1

COPS9-203, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-203ENST00000489698 PTPN23Q9H3S7 1636 aa37.85■■■■□ 3.65
COPS9-203ENST00000489698 PTPRKQ15262 1439 aa37.85■■■■□ 3.65
COPS9-203ENST00000489698 WASHC2CQ9Y4E1 1318 aa37.82■■■■□ 3.64
COPS9-203ENST00000489698 FGD6Q6ZV73 1430 aa37.79■■■■□ 3.64
COPS9-203ENST00000489698 MYO3AQ8NEV4 1616 aa37.79■■■■□ 3.64
COPS9-203ENST00000489698 IQSEC2Q5JU85 1478 aa37.78■■■■□ 3.64
COPS9-203ENST00000489698 KDM5DQ9BY66 1539 aa37.77■■■■□ 3.64
COPS9-203ENST00000489698 ABCC5O15440 1437 aa37.76■■■■□ 3.63
COPS9-203ENST00000489698 ZNF142P52746 1687 aaPredicted RBP37.76■■■■□ 3.63
COPS9-203ENST00000489698 ILDR2Q71H61 639 aa37.75■■■■□ 3.63
COPS9-203ENST00000489698 NCKAP5LQ9HCH0 1330 aa37.74■■■■□ 3.63
COPS9-203ENST00000489698 FAM135AQ9P2D6 1515 aa37.71■■■■□ 3.63
COPS9-203ENST00000489698 FBXO31Q5XUX0 539 aaPredicted RBP37.71■■■■□ 3.63
COPS9-203ENST00000489698 CROCC2H7BZ55 1655 aa37.71■■■■□ 3.63
COPS9-203ENST00000489698 SPATA31D1Q6ZQQ2 1576 aa37.71■■■■□ 3.63
COPS9-203ENST00000489698 CEP170BQ9Y4F5 1589 aaPredicted RBP37.71■■■■□ 3.63
COPS9-203ENST00000489698 TCOF1Q13428 1488 aaKnown RBP37.71■■■■□ 3.63
COPS9-203ENST00000489698 DAPK1P53355 1430 aa37.7■■■■□ 3.62
COPS9-203ENST00000489698 RRP7BPQ9NSQ0 103 aa37.69■■■■□ 3.62
COPS9-203ENST00000489698 DUOX2Q9NRD8 1548 aa37.68■■■■□ 3.62
COPS9-203ENST00000489698 SHANK2Q9UPX8 1470 aa37.68■■■■□ 3.62
COPS9-203ENST00000489698 PLA2R1Q13018 1463 aa37.67■■■■□ 3.62
COPS9-203ENST00000489698 RNF17Q9BXT8 1623 aaKnown RBP37.67■■■■□ 3.62
COPS9-203ENST00000489698 EIF2AK4Q9P2K8 1649 aaKnown RBP37.67■■■■□ 3.62
COPS9-203ENST00000489698 KIF15Q9NS87 1388 aa37.67■■■■□ 3.62
COPS9-203ENST00000489698 DNMT1P26358 1616 aaKnown RBP37.66■■■■□ 3.62
COPS9-203ENST00000489698 PZPP20742 1482 aa37.65■■■■□ 3.62
COPS9-203ENST00000489698 ZNF335Q9H4Z2 1342 aaPredicted RBP37.65■■■■□ 3.62
COPS9-203ENST00000489698 CHIC2Q9UKJ5 165 aa37.64■■■■□ 3.62
COPS9-203ENST00000489698 TNRQ92752 1358 aa37.63■■■■□ 3.61
COPS9-203ENST00000489698 PKD2Q13563 968 aa37.62■■■■□ 3.61
COPS9-203ENST00000489698 FAM50AQ14320 339 aaKnown RBP37.62■■■■□ 3.61
COPS9-203ENST00000489698 ABCC3O15438 1527 aa37.58■■■■□ 3.61
COPS9-203ENST00000489698 A2ML1A8K2U0 1454 aa37.58■■■■□ 3.61
COPS9-203ENST00000489698 SOCS7O14512 581 aa37.57■■■■□ 3.6
COPS9-203ENST00000489698 ZC3H13Q5T200 1668 aaKnown RBP37.56■■■■□ 3.6
COPS9-203ENST00000489698 MROH1Q8NDA8 1641 aa37.55■■■■□ 3.6
COPS9-203ENST00000489698 ANKRD30AQ9BXX3 1397 aa37.55■■■■□ 3.6
COPS9-203ENST00000489698 ERBINQ96RT1 1412 aa37.53■■■■□ 3.6
COPS9-203ENST00000489698 UBAP1LF5GYI3 381 aa37.52■■■■□ 3.6
COPS9-203ENST00000489698 CEP152O94986 1710 aa37.52■■■■□ 3.6
COPS9-203ENST00000489698 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.51■■■■□ 3.6
COPS9-203ENST00000489698 PPARGC1BQ86YN6 1023 aaKnown RBP37.47■■■■□ 3.59
COPS9-203ENST00000489698 CFAP65Q6ZU64 1925 aaKnown RBP37.47■■■■□ 3.59
COPS9-203ENST00000489698 PRDM15P57071 1507 aaPredicted RBP37.42■■■■□ 3.58
COPS9-203ENST00000489698 NLRP1Q9C000 1473 aa37.42■■■■□ 3.58
COPS9-203ENST00000489698 POLR1AO95602 1720 aaPredicted RBP37.41■■■■□ 3.58
COPS9-203ENST00000489698 ERVK-7P63135 1459 aa37.39■■■■□ 3.58
COPS9-203ENST00000489698 THEMISQ8N1K5 641 aaPredicted RBP37.39■■■■□ 3.58
COPS9-203ENST00000489698 KANK1Q14678 1352 aa37.39■■■■□ 3.58
COPS9-203ENST00000489698 ADGRL2O95490 1459 aa37.38■■■■□ 3.57
COPS9-203ENST00000489698 UGGT1Q9NYU2 1555 aa37.37■■■■□ 3.57
COPS9-203ENST00000489698 DEPDC5O75140 1603 aa37.36■■■■□ 3.57
COPS9-203ENST00000489698 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.36■■■■□ 3.57
COPS9-203ENST00000489698 NEURL4Q96JN8 1562 aa37.35■■■■□ 3.57
COPS9-203ENST00000489698 ANKLE2Q86XL3 938 aa37.31■■■■□ 3.56
COPS9-203ENST00000489698 ARHGAP31Q2M1Z3 1444 aa37.29■■■■□ 3.56
COPS9-203ENST00000489698 CPS1P31327 1500 aa37.26■■■■□ 3.56
COPS9-203ENST00000489698 ANKRD50Q9ULJ7 1429 aa37.26■■■■□ 3.55
COPS9-203ENST00000489698 ITGAEP38570 1179 aa37.25■■■■□ 3.55
COPS9-203ENST00000489698 SCAF1Q9H7N4 1312 aaKnown RBP37.24■■■■□ 3.55
COPS9-203ENST00000489698 VWDEQ8N2E2 1590 aa37.21■■■■□ 3.55
COPS9-203ENST00000489698 LMTK2Q8IWU2 1503 aa37.2■■■■□ 3.55
COPS9-203ENST00000489698 PIP4K2BP78356 416 aa37.19■■■■□ 3.54
COPS9-203ENST00000489698 UBR1Q8IWV7 1749 aa37.16■■■■□ 3.54
COPS9-203ENST00000489698 TOM1O60784 492 aa37.16■■■■□ 3.54
COPS9-203ENST00000489698 NPHP4O75161 1426 aaPredicted RBP37.15■■■■□ 3.54
COPS9-203ENST00000489698 HSPA1LP34931 641 aa37.14■■■■□ 3.54
COPS9-203ENST00000489698 ROCK1Q13464 1354 aa37.12■■■■□ 3.53
COPS9-203ENST00000489698 STAG3Q9UJ98 1225 aa37.11■■■■□ 3.53
COPS9-203ENST00000489698 MED14O60244 1454 aa37.11■■■■□ 3.53
COPS9-203ENST00000489698 EFCAB6Q5THR3 1501 aa37.1■■■■□ 3.53
COPS9-203ENST00000489698 IQGAP1P46940 1657 aa37.09■■■■□ 3.53
COPS9-203ENST00000489698 PIK3C2BO00750 1634 aa37.07■■■■□ 3.53
COPS9-203ENST00000489698 MED1Q15648 1581 aaPredicted RBP37.07■■■■□ 3.52
COPS9-203ENST00000489698 IDI1Q13907 227 aa37.05■■■■□ 3.52
COPS9-203ENST00000489698 TXNDC2Q86VQ3 553 aa37.04■■■■□ 3.52
COPS9-203ENST00000489698 SYNMO15061 1565 aa37.03■■■■□ 3.52
COPS9-203ENST00000489698 LTKP29376 864 aa37.01■■■■□ 3.52
COPS9-203ENST00000489698 NOS1P29475 1434 aa37.01■■■■□ 3.51
COPS9-203ENST00000489698 SCAF11Q99590 1463 aaKnown RBP37.01■■■■□ 3.51
COPS9-203ENST00000489698 UNC13BO14795 1591 aa37■■■■□ 3.51
COPS9-203ENST00000489698 EID1Q9Y6B2 187 aa37■■■■□ 3.51
COPS9-203ENST00000489698 SLIT1O75093 1534 aa36.99■■■■□ 3.51
COPS9-203ENST00000489698 TET3O43151 1660 aa36.99■■■■□ 3.51
COPS9-203ENST00000489698 ARHGAP23Q9P227 1491 aa36.98■■■■□ 3.51
COPS9-203ENST00000489698 ALKQ9UM73 1620 aa36.98■■■■□ 3.51
COPS9-203ENST00000489698 STRCP1A6NGW2 1772 aa36.96■■■■□ 3.51
COPS9-203ENST00000489698 RPRD2Q5VT52 1461 aaKnown RBP36.96■■■■□ 3.51
COPS9-203ENST00000489698 TMEM2Q9UHN6 1383 aa36.94■■■■□ 3.5
COPS9-203ENST00000489698 SLC52A1Q9NWF4 448 aa36.94■■■■□ 3.5
COPS9-203ENST00000489698 RRBP1Q9P2E9 1410 aaKnown RBP36.93■■■■□ 3.5
COPS9-203ENST00000489698 GCC2Q8IWJ2 1684 aa36.93■■■■□ 3.5
COPS9-203ENST00000489698 NUP155O75694 1391 aa36.91■■■■□ 3.5
COPS9-203ENST00000489698 LRRC7Q96NW7 1537 aa36.9■■■■□ 3.5
COPS9-203ENST00000489698 KDM5AP29375 1690 aaKnown RBP36.9■■■■□ 3.5
COPS9-203ENST00000489698 ADGRB3O60242 1522 aa36.87■■■■□ 3.49
COPS9-203ENST00000489698 IQGAP3Q86VI3 1631 aa36.87■■■■□ 3.49
COPS9-203ENST00000489698 E9PCH4 1651 aa36.84■■■■□ 3.49
COPS9-203ENST00000489698 SENP3Q9H4L4 574 aaPredicted RBP36.83■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms