RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 FBXO31Q5XUX0 539 aaPredicted RBP35.84■■■■□ 3.33
HOXA9-205ENST00000489695 TNRQ92752 1358 aa35.84■■■■□ 3.33
HOXA9-205ENST00000489695 FAM135AQ9P2D6 1515 aa35.83■■■■□ 3.33
HOXA9-205ENST00000489695 CCDC141Q6ZP82 1450 aa35.83■■■■□ 3.33
HOXA9-205ENST00000489695 PZPP20742 1482 aa35.82■■■■□ 3.32
HOXA9-205ENST00000489695 RSPH4AQ5TD94 716 aa35.82■■■■□ 3.32
HOXA9-205ENST00000489695 KDM5DQ9BY66 1539 aa35.81■■■■□ 3.32
HOXA9-205ENST00000489695 CAMSAP2Q08AD1 1489 aa35.78■■■■□ 3.32
HOXA9-205ENST00000489695 NCOA2Q15596 1464 aa35.78■■■■□ 3.32
HOXA9-205ENST00000489695 NEURL4Q96JN8 1562 aa35.77■■■■□ 3.32
HOXA9-205ENST00000489695 WASHC2CQ9Y4E1 1318 aa35.76■■■■□ 3.31
HOXA9-205ENST00000489695 POLR1AO95602 1720 aaPredicted RBP35.74■■■■□ 3.31
HOXA9-205ENST00000489695 CPS1P31327 1500 aa35.73■■■■□ 3.31
HOXA9-205ENST00000489695 SHANK2Q9UPX8 1470 aa35.72■■■■□ 3.31
HOXA9-205ENST00000489695 MIA2Q96PC5 1412 aa35.71■■■■□ 3.31
HOXA9-205ENST00000489695 ANKLE2Q86XL3 938 aa35.7■■■■□ 3.31
HOXA9-205ENST00000489695 THEMISQ8N1K5 641 aaPredicted RBP35.69■■■■□ 3.3
HOXA9-205ENST00000489695 NLRP1Q9C000 1473 aa35.68■■■■□ 3.3
HOXA9-205ENST00000489695 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.68■■■■□ 3.3
HOXA9-205ENST00000489695 ARHGEF5Q12774 1597 aa35.68■■■■□ 3.3
HOXA9-205ENST00000489695 TOM1O60784 492 aa35.66■■■■□ 3.3
HOXA9-205ENST00000489695 TSPY4P0CV99 314 aa35.64■■■■□ 3.3
HOXA9-205ENST00000489695 TSPY10P0CW01 314 aa35.64■■■■□ 3.3
HOXA9-205ENST00000489695 HSPA1LP34931 641 aa35.64■■■■□ 3.3
HOXA9-205ENST00000489695 MED14O60244 1454 aa35.63■■■■□ 3.29
HOXA9-205ENST00000489695 VWDEQ8N2E2 1590 aa35.62■■■■□ 3.29
HOXA9-205ENST00000489695 UGGT1Q9NYU2 1555 aa35.62■■■■□ 3.29
HOXA9-205ENST00000489695 PIP4K2BP78356 416 aa35.61■■■■□ 3.29
HOXA9-205ENST00000489695 DEPDC5O75140 1603 aa35.6■■■■□ 3.29
HOXA9-205ENST00000489695 SCAF1Q9H7N4 1312 aaKnown RBP35.59■■■■□ 3.29
HOXA9-205ENST00000489695 NPHP4O75161 1426 aaPredicted RBP35.58■■■■□ 3.29
HOXA9-205ENST00000489695 RNF17Q9BXT8 1623 aaKnown RBP35.54■■■■□ 3.28
HOXA9-205ENST00000489695 ABCC3O15438 1527 aa35.52■■■■□ 3.28
HOXA9-205ENST00000489695 MED1Q15648 1581 aaPredicted RBP35.51■■■■□ 3.27
HOXA9-205ENST00000489695 MAST1Q9Y2H9 1570 aa35.51■■■■□ 3.27
HOXA9-205ENST00000489695 LRRC9Q6ZRR7 1453 aa35.5■■■■□ 3.27
HOXA9-205ENST00000489695 ALKQ9UM73 1620 aa35.48■■■■□ 3.27
HOXA9-205ENST00000489695 ZC3H13Q5T200 1668 aaKnown RBP35.48■■■■□ 3.27
HOXA9-205ENST00000489695 IQGAP1P46940 1657 aa35.47■■■■□ 3.27
HOXA9-205ENST00000489695 EIF2AK4Q9P2K8 1649 aaKnown RBP35.45■■■■□ 3.27
HOXA9-205ENST00000489695 ERVK-7P63135 1459 aa35.44■■■■□ 3.26
HOXA9-205ENST00000489695 VPS8Q8N3P4 1428 aa35.42■■■■□ 3.26
HOXA9-205ENST00000489695 MROH1Q8NDA8 1641 aa35.41■■■■□ 3.26
HOXA9-205ENST00000489695 LRRC7Q96NW7 1537 aa35.39■■■■□ 3.26
HOXA9-205ENST00000489695 STRCP1A6NGW2 1772 aa35.37■■■■□ 3.25
HOXA9-205ENST00000489695 KANK4Q5T7N3 995 aaPredicted RBP35.35■■■■□ 3.25
HOXA9-205ENST00000489695 MAP3K1Q13233 1512 aa35.34■■■■□ 3.25
HOXA9-205ENST00000489695 MYOM3Q5VTT5 1437 aa35.33■■■■□ 3.25
HOXA9-205ENST00000489695 SYNMO15061 1565 aa35.32■■■■□ 3.24
HOXA9-205ENST00000489695 UBR1Q8IWV7 1749 aa35.32■■■■□ 3.24
HOXA9-205ENST00000489695 DUOX2Q9NRD8 1548 aa35.32■■■■□ 3.24
HOXA9-205ENST00000489695 CEP152O94986 1710 aa35.29■■■■□ 3.24
HOXA9-205ENST00000489695 SCAF11Q99590 1463 aaKnown RBP35.29■■■■□ 3.24
HOXA9-205ENST00000489695 ARHGAP31Q2M1Z3 1444 aa35.27■■■■□ 3.24
HOXA9-205ENST00000489695 ARHGAP23Q9P227 1491 aa35.27■■■■□ 3.24
HOXA9-205ENST00000489695 LTKP29376 864 aa35.26■■■■□ 3.24
HOXA9-205ENST00000489695 SLIT1O75093 1534 aa35.25■■■■□ 3.23
HOXA9-205ENST00000489695 PHF23Q9BUL5 403 aaPredicted RBP35.23■■■■□ 3.23
HOXA9-205ENST00000489695 PRDM15P57071 1507 aaPredicted RBP35.22■■■■□ 3.23
HOXA9-205ENST00000489695 TXNDC2Q86VQ3 553 aa35.22■■■■□ 3.23
HOXA9-205ENST00000489695 KIF15Q9NS87 1388 aa35.22■■■■□ 3.23
HOXA9-205ENST00000489695 LOC105371045A0A1W2PR82 267 aa35.2■■■■□ 3.23
HOXA9-205ENST00000489695 ERBINQ96RT1 1412 aa35.2■■■■□ 3.23
HOXA9-205ENST00000489695 CFAP65Q6ZU64 1925 aaKnown RBP35.19■■■■□ 3.22
HOXA9-205ENST00000489695 ABCC5O15440 1437 aa35.17■■■■□ 3.22
HOXA9-205ENST00000489695 RRP7BPQ9NSQ0 103 aa35.15■■■■□ 3.22
HOXA9-205ENST00000489695 SENP3Q9H4L4 574 aaPredicted RBP35.14■■■■□ 3.22
HOXA9-205ENST00000489695 EID1Q9Y6B2 187 aa35.14■■■■□ 3.22
HOXA9-205ENST00000489695 TMEM2Q9UHN6 1383 aa35.12■■■■□ 3.21
HOXA9-205ENST00000489695 CROCC2H7BZ55 1655 aa35.1■■■■□ 3.21
HOXA9-205ENST00000489695 PIK3C2BO00750 1634 aa35.08■■■■□ 3.21
HOXA9-205ENST00000489695 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.08■■■■□ 3.21
HOXA9-205ENST00000489695 XIRP1Q702N8 1843 aaKnown RBP35.06■■■■□ 3.2
HOXA9-205ENST00000489695 PTPN23Q9H3S7 1636 aa35.06■■■■□ 3.2
HOXA9-205ENST00000489695 KANK1Q14678 1352 aa35.05■■■■□ 3.2
HOXA9-205ENST00000489695 DAPK1P53355 1430 aa35.05■■■■□ 3.2
HOXA9-205ENST00000489695 LMTK2Q8IWU2 1503 aa35.02■■■■□ 3.2
HOXA9-205ENST00000489695 KDM5AP29375 1690 aaKnown RBP35.02■■■■□ 3.2
HOXA9-205ENST00000489695 FAM135BQ49AJ0 1406 aa35.01■■■■□ 3.2
HOXA9-205ENST00000489695 IDI1Q13907 227 aa35.01■■■■□ 3.2
HOXA9-205ENST00000489695 STAG3Q9UJ98 1225 aa35.01■■■■□ 3.2
HOXA9-205ENST00000489695 RGS17Q9UGC6 210 aaPredicted RBP35■■■■□ 3.19
HOXA9-205ENST00000489695 EFCAB6Q5THR3 1501 aa35■■■■□ 3.19
HOXA9-205ENST00000489695 FGD6Q6ZV73 1430 aa34.97■■■■□ 3.19
HOXA9-205ENST00000489695 KCNA6P17658 529 aa34.96■■■■□ 3.19
HOXA9-205ENST00000489695 TMEM94Q12767 1356 aa34.96■■■■□ 3.19
HOXA9-205ENST00000489695 ANKRD30AQ9BXX3 1397 aa34.95■■■■□ 3.19
HOXA9-205ENST00000489695 TET3O43151 1660 aa34.95■■■■□ 3.18
HOXA9-205ENST00000489695 NOS1P29475 1434 aa34.92■■■■□ 3.18
HOXA9-205ENST00000489695 APLP2Q06481 763 aa34.91■■■■□ 3.18
HOXA9-205ENST00000489695 SLC26A8Q96RN1 970 aa34.9■■■■□ 3.18
HOXA9-205ENST00000489695 CHIC2Q9UKJ5 165 aa34.9■■■■□ 3.18
HOXA9-205ENST00000489695 PROSER2Q86WR7 435 aaPredicted RBP34.86■■■■□ 3.17
HOXA9-205ENST00000489695 SLC52A1Q9NWF4 448 aa34.86■■■■□ 3.17
HOXA9-205ENST00000489695 ADGRB3O60242 1522 aa34.85■■■■□ 3.17
HOXA9-205ENST00000489695 NKTRP30414 1462 aaKnown RBP34.82■■■■□ 3.16
HOXA9-205ENST00000489695 RBM33Q96EV2 1170 aaKnown RBP34.81■■■■□ 3.16
HOXA9-205ENST00000489695 NWD1Q149M9 1564 aa34.81■■■■□ 3.16
HOXA9-205ENST00000489695 ROBO1Q9Y6N7 1651 aa34.8■■■■□ 3.16
HOXA9-205ENST00000489695 ADGRL2O95490 1459 aa34.8■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms