RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 CCDC141Q6ZP82 1450 aa9.18□□□□□ -0.94
CNOT9-207ENST00000489687 LRRC9Q6ZRR7 1453 aa9.18□□□□□ -0.94
CNOT9-207ENST00000489687 MYO3AQ8NEV4 1616 aa9.18□□□□□ -0.94
CNOT9-207ENST00000489687 ESF1Q9H501 851 aaKnown RBP9.17□□□□□ -0.94
CNOT9-207ENST00000489687 CNTLNQ9NXG0 1405 aa9.16□□□□□ -0.94
CNOT9-207ENST00000489687 SETD1BQ9UPS6 1966 aaKnown RBP9.16□□□□□ -0.94
CNOT9-207ENST00000489687 KANK4Q5T7N3 995 aaPredicted RBP9.16□□□□□ -0.94
CNOT9-207ENST00000489687 GGT6Q6P531 493 aa9.15□□□□□ -0.94
CNOT9-207ENST00000489687 ZNF142P52746 1687 aaPredicted RBP9.15□□□□□ -0.94
CNOT9-207ENST00000489687 ARHGEF5Q12774 1597 aa9.15□□□□□ -0.95
CNOT9-207ENST00000489687 CAMSAP1Q5T5Y3 1602 aa9.14□□□□□ -0.95
CNOT9-207ENST00000489687 U3KPZ7 1027 aaPredicted RBP9.14□□□□□ -0.95
CNOT9-207ENST00000489687 CEP170BQ9Y4F5 1589 aaPredicted RBP9.14□□□□□ -0.95
CNOT9-207ENST00000489687 CROCC2H7BZ55 1655 aa9.13□□□□□ -0.95
CNOT9-207ENST00000489687 PTPRKQ15262 1439 aa9.13□□□□□ -0.95
CNOT9-207ENST00000489687 NCOA1Q15788 1441 aa9.13□□□□□ -0.95
CNOT9-207ENST00000489687 ZMYM3Q14202 1370 aa9.12□□□□□ -0.95
CNOT9-207ENST00000489687 KDM5DQ9BY66 1539 aa9.12□□□□□ -0.95
CNOT9-207ENST00000489687 NPATQ14207 1427 aa9.12□□□□□ -0.95
CNOT9-207ENST00000489687 MYOM3Q5VTT5 1437 aa9.12□□□□□ -0.95
CNOT9-207ENST00000489687 RTEL1-TNFRSF6BF6WH68 1400 aa9.11□□□□□ -0.95
CNOT9-207ENST00000489687 RNF17Q9BXT8 1623 aaKnown RBP9.1□□□□□ -0.95
CNOT9-207ENST00000489687 KIF3BO15066 747 aa9.1□□□□□ -0.95
CNOT9-207ENST00000489687 MAST1Q9Y2H9 1570 aa9.1□□□□□ -0.95
CNOT9-207ENST00000489687 CEP152O94986 1710 aa9.1□□□□□ -0.95
CNOT9-207ENST00000489687 DHX29Q7Z478 1369 aaKnown RBP9.1□□□□□ -0.95
CNOT9-207ENST00000489687 MAP3K1Q13233 1512 aa9.1□□□□□ -0.95
CNOT9-207ENST00000489687 MROH1Q8NDA8 1641 aa9.09□□□□□ -0.95
CNOT9-207ENST00000489687 PTPN23Q9H3S7 1636 aa9.09□□□□□ -0.95
CNOT9-207ENST00000489687 CERKQ8TCT0 537 aa9.09□□□□□ -0.95
CNOT9-207ENST00000489687 FBXO31Q5XUX0 539 aaPredicted RBP9.08□□□□□ -0.96
CNOT9-207ENST00000489687 ABCC3O15438 1527 aa9.08□□□□□ -0.96
CNOT9-207ENST00000489687 PZPP20742 1482 aa9.08□□□□□ -0.96
CNOT9-207ENST00000489687 NCKAP5LQ9HCH0 1330 aa9.07□□□□□ -0.96
CNOT9-207ENST00000489687 DNMT1P26358 1616 aaKnown RBP9.07□□□□□ -0.96
CNOT9-207ENST00000489687 LTBP4Q8N2S1 1624 aa9.07□□□□□ -0.96
CNOT9-207ENST00000489687 ZNF219Q9P2Y4 722 aaPredicted RBP9.07□□□□□ -0.96
CNOT9-207ENST00000489687 POLR1AO95602 1720 aaPredicted RBP9.07□□□□□ -0.96
CNOT9-207ENST00000489687 CFAP65Q6ZU64 1925 aaKnown RBP9.07□□□□□ -0.96
CNOT9-207ENST00000489687 PTPRTO14522 1441 aa9.06□□□□□ -0.96
CNOT9-207ENST00000489687 EIF2AK4Q9P2K8 1649 aaKnown RBP9.06□□□□□ -0.96
CNOT9-207ENST00000489687 TNRQ92752 1358 aa9.06□□□□□ -0.96
CNOT9-207ENST00000489687 A2ML1A8K2U0 1454 aa9.06□□□□□ -0.96
CNOT9-207ENST00000489687 NEURL4Q96JN8 1562 aa9.06□□□□□ -0.96
CNOT9-207ENST00000489687 FGD6Q6ZV73 1430 aa9.05□□□□□ -0.96
CNOT9-207ENST00000489687 MIA2Q96PC5 1412 aa9.05□□□□□ -0.96
CNOT9-207ENST00000489687 ZC3H13Q5T200 1668 aaKnown RBP9.05□□□□□ -0.96
CNOT9-207ENST00000489687 TCOF1Q13428 1488 aaKnown RBP9.05□□□□□ -0.96
CNOT9-207ENST00000489687 FAM135AQ9P2D6 1515 aa9.05□□□□□ -0.96
CNOT9-207ENST00000489687 ABCC5O15440 1437 aa9.05□□□□□ -0.96
CNOT9-207ENST00000489687 ZNF335Q9H4Z2 1342 aaPredicted RBP9.05□□□□□ -0.96
CNOT9-207ENST00000489687 WASHC2CQ9Y4E1 1318 aa9.05□□□□□ -0.96
CNOT9-207ENST00000489687 PLA2R1Q13018 1463 aa9.04□□□□□ -0.96
CNOT9-207ENST00000489687 SHANK2Q9UPX8 1470 aa9.04□□□□□ -0.96
CNOT9-207ENST00000489687 KIF15Q9NS87 1388 aa9.04□□□□□ -0.96
CNOT9-207ENST00000489687 HRCP23327 699 aa9.04□□□□□ -0.96
CNOT9-207ENST00000489687 DAPK1P53355 1430 aa9.04□□□□□ -0.96
CNOT9-207ENST00000489687 TSPY4P0CV99 314 aa9.03□□□□□ -0.96
CNOT9-207ENST00000489687 TSPY10P0CW01 314 aa9.03□□□□□ -0.96
CNOT9-207ENST00000489687 PRDM15P57071 1507 aaPredicted RBP9.03□□□□□ -0.96
CNOT9-207ENST00000489687 DUOX2Q9NRD8 1548 aa9.03□□□□□ -0.96
CNOT9-207ENST00000489687 ERVK-7P63135 1459 aa9.02□□□□□ -0.96
CNOT9-207ENST00000489687 C1QBPQ07021 282 aaKnown RBP9.02□□□□□ -0.97
CNOT9-207ENST00000489687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.01□□□□□ -0.97
CNOT9-207ENST00000489687 SPATA31D1Q6ZQQ2 1576 aa9.01□□□□□ -0.97
CNOT9-207ENST00000489687 RRP7BPQ9NSQ0 103 aa9.01□□□□□ -0.97
CNOT9-207ENST00000489687 UGGT1Q9NYU2 1555 aa9.01□□□□□ -0.97
CNOT9-207ENST00000489687 CHIC2Q9UKJ5 165 aa9.01□□□□□ -0.97
CNOT9-207ENST00000489687 DEPDC5O75140 1603 aa9.01□□□□□ -0.97
CNOT9-207ENST00000489687 RSPH4AQ5TD94 716 aa9□□□□□ -0.97
CNOT9-207ENST00000489687 NLRP1Q9C000 1473 aa9□□□□□ -0.97
CNOT9-207ENST00000489687 ERBINQ96RT1 1412 aa8.99□□□□□ -0.97
CNOT9-207ENST00000489687 ZBTB12Q9Y330 459 aaPredicted RBP8.99□□□□□ -0.97
CNOT9-207ENST00000489687 IQGAP1P46940 1657 aa8.99□□□□□ -0.97
CNOT9-207ENST00000489687 UBR1Q8IWV7 1749 aa8.99□□□□□ -0.97
CNOT9-207ENST00000489687 FAM50AQ14320 339 aaKnown RBP8.98□□□□□ -0.97
CNOT9-207ENST00000489687 PPARGC1BQ86YN6 1023 aaKnown RBP8.98□□□□□ -0.97
CNOT9-207ENST00000489687 VWDEQ8N2E2 1590 aa8.98□□□□□ -0.97
CNOT9-207ENST00000489687 PIK3C2BO00750 1634 aa8.98□□□□□ -0.97
CNOT9-207ENST00000489687 STRCP1A6NGW2 1772 aa8.97□□□□□ -0.97
CNOT9-207ENST00000489687 PKD2Q13563 968 aa8.97□□□□□ -0.97
CNOT9-207ENST00000489687 FKBP8Q14318 412 aa8.97□□□□□ -0.97
CNOT9-207ENST00000489687 EFCAB6Q5THR3 1501 aa8.96□□□□□ -0.97
CNOT9-207ENST00000489687 SYNMO15061 1565 aa8.96□□□□□ -0.97
CNOT9-207ENST00000489687 NPHP4O75161 1426 aaPredicted RBP8.96□□□□□ -0.98
CNOT9-207ENST00000489687 ANKRD30AQ9BXX3 1397 aa8.95□□□□□ -0.98
CNOT9-207ENST00000489687 ADGRL2O95490 1459 aa8.95□□□□□ -0.98
CNOT9-207ENST00000489687 IQSEC2Q5JU85 1478 aa8.95□□□□□ -0.98
CNOT9-207ENST00000489687 UBAP1LF5GYI3 381 aa8.94□□□□□ -0.98
CNOT9-207ENST00000489687 AMER1Q5JTC6 1135 aaPredicted RBP8.93□□□□□ -0.98
CNOT9-207ENST00000489687 RNF39Q9H2S5 420 aa8.93□□□□□ -0.98
CNOT9-207ENST00000489687 DISP3Q9P2K9 1392 aa8.93□□□□□ -0.98
CNOT9-207ENST00000489687 SCAF11Q99590 1463 aaKnown RBP8.93□□□□□ -0.98
CNOT9-207ENST00000489687 MYO5BQ9ULV0 1848 aa8.93□□□□□ -0.98
CNOT9-207ENST00000489687 ALKQ9UM73 1620 aa8.92□□□□□ -0.98
CNOT9-207ENST00000489687 CPS1P31327 1500 aa8.92□□□□□ -0.98
CNOT9-207ENST00000489687 LMTK2Q8IWU2 1503 aa8.92□□□□□ -0.98
CNOT9-207ENST00000489687 MED14O60244 1454 aa8.92□□□□□ -0.98
CNOT9-207ENST00000489687 ARHGAP31Q2M1Z3 1444 aa8.92□□□□□ -0.98
CNOT9-207ENST00000489687 KANK1Q14678 1352 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms