RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 PPARGC1BQ86YN6 1023 aaKnown RBP16.28■□□□□ 0.2
SCAMP4-208ENST00000489554 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
SCAMP4-208ENST00000489554 DUOX2Q9NRD8 1548 aa16.28■□□□□ 0.2
SCAMP4-208ENST00000489554 EIF2AK4Q9P2K8 1649 aaKnown RBP16.27■□□□□ 0.2
SCAMP4-208ENST00000489554 CROCC2H7BZ55 1655 aa16.27■□□□□ 0.19
SCAMP4-208ENST00000489554 DNMT1P26358 1616 aaKnown RBP16.27■□□□□ 0.19
SCAMP4-208ENST00000489554 RNF17Q9BXT8 1623 aaKnown RBP16.26■□□□□ 0.19
SCAMP4-208ENST00000489554 KIF15Q9NS87 1388 aa16.26■□□□□ 0.19
SCAMP4-208ENST00000489554 PZPP20742 1482 aa16.25■□□□□ 0.19
SCAMP4-208ENST00000489554 ILDR1Q86SU0 546 aaPredicted RBP16.24■□□□□ 0.19
SCAMP4-208ENST00000489554 ERBINQ96RT1 1412 aa16.24■□□□□ 0.19
SCAMP4-208ENST00000489554 MYO3AQ8NEV4 1616 aa16.23■□□□□ 0.19
SCAMP4-208ENST00000489554 ANKRD30AQ9BXX3 1397 aa16.23■□□□□ 0.19
SCAMP4-208ENST00000489554 NCOA1Q15788 1441 aa16.22■□□□□ 0.19
SCAMP4-208ENST00000489554 RRP7BPQ9NSQ0 103 aa16.22■□□□□ 0.19
SCAMP4-208ENST00000489554 STRCQ7RTU9 1775 aa16.22■□□□□ 0.19
SCAMP4-208ENST00000489554 CEP170BQ9Y4F5 1589 aaPredicted RBP16.21■□□□□ 0.19
SCAMP4-208ENST00000489554 ZNF142P52746 1687 aaPredicted RBP16.21■□□□□ 0.19
SCAMP4-208ENST00000489554 ZC3H13Q5T200 1668 aaKnown RBP16.21■□□□□ 0.19
SCAMP4-208ENST00000489554 PTPRTO14522 1441 aa16.21■□□□□ 0.19
SCAMP4-208ENST00000489554 FAM50AQ14320 339 aaKnown RBP16.21■□□□□ 0.19
SCAMP4-208ENST00000489554 TNRQ92752 1358 aa16.21■□□□□ 0.19
SCAMP4-208ENST00000489554 ABCC3O15438 1527 aa16.2■□□□□ 0.18
SCAMP4-208ENST00000489554 CAMSAP1Q5T5Y3 1602 aa16.2■□□□□ 0.18
SCAMP4-208ENST00000489554 FBXO31Q5XUX0 539 aaPredicted RBP16.2■□□□□ 0.18
SCAMP4-208ENST00000489554 A2ML1A8K2U0 1454 aa16.19■□□□□ 0.18
SCAMP4-208ENST00000489554 PLA2R1Q13018 1463 aa16.19■□□□□ 0.18
SCAMP4-208ENST00000489554 CHIC2Q9UKJ5 165 aa16.19■□□□□ 0.18
SCAMP4-208ENST00000489554 MROH1Q8NDA8 1641 aa16.19■□□□□ 0.18
SCAMP4-208ENST00000489554 FBXO41Q8TF61 875 aa16.18■□□□□ 0.18
SCAMP4-208ENST00000489554 ADGRL2O95490 1459 aa16.17■□□□□ 0.18
SCAMP4-208ENST00000489554 PRDM15P57071 1507 aaPredicted RBP16.17■□□□□ 0.18
SCAMP4-208ENST00000489554 PKD2Q13563 968 aa16.16■□□□□ 0.18
SCAMP4-208ENST00000489554 NLRP1Q9C000 1473 aa16.16■□□□□ 0.18
SCAMP4-208ENST00000489554 KANK1Q14678 1352 aa16.14■□□□□ 0.17
SCAMP4-208ENST00000489554 CERKQ8TCT0 537 aa16.14■□□□□ 0.17
SCAMP4-208ENST00000489554 SPATA31D1Q6ZQQ2 1576 aa16.13■□□□□ 0.17
SCAMP4-208ENST00000489554 DEPDC5O75140 1603 aa16.13■□□□□ 0.17
SCAMP4-208ENST00000489554 NCKAP5LQ9HCH0 1330 aa16.13■□□□□ 0.17
SCAMP4-208ENST00000489554 ARHGAP31Q2M1Z3 1444 aa16.12■□□□□ 0.17
SCAMP4-208ENST00000489554 ERVK-7P63135 1459 aa16.12■□□□□ 0.17
SCAMP4-208ENST00000489554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.12■□□□□ 0.17
SCAMP4-208ENST00000489554 CEP152O94986 1710 aa16.11■□□□□ 0.17
SCAMP4-208ENST00000489554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.11■□□□□ 0.179e-7■■■□□ 16.5
SCAMP4-208ENST00000489554 RRBP1Q9P2E9 1410 aaKnown RBP16.11■□□□□ 0.17
SCAMP4-208ENST00000489554 THEMISQ8N1K5 641 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-208ENST00000489554 ANKRD50Q9ULJ7 1429 aa16.1■□□□□ 0.17
SCAMP4-208ENST00000489554 UGGT1Q9NYU2 1555 aa16.09■□□□□ 0.17
SCAMP4-208ENST00000489554 ROCK1Q13464 1354 aa16.09■□□□□ 0.17
SCAMP4-208ENST00000489554 LMTK2Q8IWU2 1503 aa16.09■□□□□ 0.17
SCAMP4-208ENST00000489554 VWDEQ8N2E2 1590 aa16.08■□□□□ 0.16
SCAMP4-208ENST00000489554 ANKLE2Q86XL3 938 aa16.06■□□□□ 0.16
SCAMP4-208ENST00000489554 LTBP4Q8N2S1 1624 aa16.05■□□□□ 0.16
SCAMP4-208ENST00000489554 POLR1AO95602 1720 aaPredicted RBP16.02■□□□□ 0.16
SCAMP4-208ENST00000489554 NEURL4Q96JN8 1562 aa16.02■□□□□ 0.16
SCAMP4-208ENST00000489554 EFCAB6Q5THR3 1501 aa16.02■□□□□ 0.15
SCAMP4-208ENST00000489554 ZNF335Q9H4Z2 1342 aaPredicted RBP16.01■□□□□ 0.15
SCAMP4-208ENST00000489554 ITGAEP38570 1179 aa16.01■□□□□ 0.15
SCAMP4-208ENST00000489554 IQSEC2Q5JU85 1478 aa16.01■□□□□ 0.15
SCAMP4-208ENST00000489554 MED14O60244 1454 aa16■□□□□ 0.15
SCAMP4-208ENST00000489554 RPRD2Q5VT52 1461 aaKnown RBP16■□□□□ 0.15
SCAMP4-208ENST00000489554 NPHP4O75161 1426 aaPredicted RBP15.99■□□□□ 0.15
SCAMP4-208ENST00000489554 NOS1P29475 1434 aa15.99■□□□□ 0.15
SCAMP4-208ENST00000489554 UNC13BO14795 1591 aa15.99■□□□□ 0.15
SCAMP4-208ENST00000489554 UBR1Q8IWV7 1749 aa15.98■□□□□ 0.15
SCAMP4-208ENST00000489554 CFAP65Q6ZU64 1925 aaKnown RBP15.98■□□□□ 0.15
SCAMP4-208ENST00000489554 TET3O43151 1660 aa15.96■□□□□ 0.15
SCAMP4-208ENST00000489554 SLIT1O75093 1534 aa15.96■□□□□ 0.15
SCAMP4-208ENST00000489554 TRIM26Q12899 539 aaPredicted RBP15.96■□□□□ 0.15
SCAMP4-208ENST00000489554 STAG3Q9UJ98 1225 aa15.96■□□□□ 0.15
SCAMP4-208ENST00000489554 ARHGAP23Q9P227 1491 aa15.96■□□□□ 0.14
SCAMP4-208ENST00000489554 IDI1Q13907 227 aa15.95■□□□□ 0.14
SCAMP4-208ENST00000489554 SLC52A1Q9NWF4 448 aa15.95■□□□□ 0.14
SCAMP4-208ENST00000489554 SCAF11Q99590 1463 aaKnown RBP15.95■□□□□ 0.14
SCAMP4-208ENST00000489554 SYNMO15061 1565 aa15.95■□□□□ 0.14
SCAMP4-208ENST00000489554 PIK3C2BO00750 1634 aa15.94■□□□□ 0.14
SCAMP4-208ENST00000489554 EID1Q9Y6B2 187 aa15.94■□□□□ 0.14
SCAMP4-208ENST00000489554 KDM5AP29375 1690 aaKnown RBP15.94■□□□□ 0.14
SCAMP4-208ENST00000489554 IQGAP1P46940 1657 aa15.94■□□□□ 0.14
SCAMP4-208ENST00000489554 NUP155O75694 1391 aa15.93■□□□□ 0.14
SCAMP4-208ENST00000489554 TMEM2Q9UHN6 1383 aa15.93■□□□□ 0.14
SCAMP4-208ENST00000489554 TXNDC2Q86VQ3 553 aa15.93■□□□□ 0.14
SCAMP4-208ENST00000489554 CPS1P31327 1500 aa15.93■□□□□ 0.14
SCAMP4-208ENST00000489554 GCC2Q8IWJ2 1684 aa15.92■□□□□ 0.14
SCAMP4-208ENST00000489554 IQGAP3Q86VI3 1631 aa15.92■□□□□ 0.14
SCAMP4-208ENST00000489554 LTKP29376 864 aa15.91■□□□□ 0.14
SCAMP4-208ENST00000489554 ADGRB3O60242 1522 aa15.9■□□□□ 0.14
SCAMP4-208ENST00000489554 NAIPQ13075 1403 aa15.87■□□□□ 0.13
SCAMP4-208ENST00000489554 E9PCH4 1651 aa15.87■□□□□ 0.13
SCAMP4-208ENST00000489554 UBAP1LF5GYI3 381 aa15.85■□□□□ 0.13
SCAMP4-208ENST00000489554 HFM1A2PYH4 1435 aa15.85■□□□□ 0.13
SCAMP4-208ENST00000489554 HDGFP51858 240 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-208ENST00000489554 PCGF6Q9BYE7 350 aa15.82■□□□□ 0.12
SCAMP4-208ENST00000489554 TMEM131LA2VDJ0 1609 aa15.82■□□□□ 0.12
SCAMP4-208ENST00000489554 ZFYVE9O95405 1425 aa15.81■□□□□ 0.12
SCAMP4-208ENST00000489554 LRRC7Q96NW7 1537 aa15.8■□□□□ 0.12
SCAMP4-208ENST00000489554 RIMS2Q9UQ26 1411 aa15.8■□□□□ 0.12
SCAMP4-208ENST00000489554 TOM1O60784 492 aa15.8■□□□□ 0.12
SCAMP4-208ENST00000489554 CHGAP10645 457 aaKnown RBP15.8■□□□□ 0.12
SCAMP4-208ENST00000489554 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms